1KAQ - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   STRUCTURE OF BACILLUS SUBTILIS NICOTINIC ACID MONONUCLEOTIDE ADENYLYL TRANSFERASE

Authors :   A. M. Olland, K. W. Underwood, R. M. Czerwinski, M. C. Lo, A. Aulabaugh, J M. L. Stahl, W. S. Somers, F. X. Sullivan, R. Chopra

Date :   02 Nov 01 (Deposition) - 12 Jul 02 (Release) - 19 Nov 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.20

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,D  (1x)
Biol. Unit 2: B,C  (1x)
Biol. Unit 3: E,F  (1x)

Keywords :   Rossmann Fold, Naad, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. M. Olland, K. W. Underwood, R. M. Czerwinski, M. C. Lo, A. Aulabaugh, J. Bard, M. L. Stahl, W. S. Somers, F. X. Sullivan, R. Chopra
Identification, Characterization, And Crystal Structure Of Bacillus Subtilis Nicotinic Acid Mononucleotide Adenylyltransferase.
J. Biol. Chem. V. 277 3698 2002
PubMed-ID: 11704676 | Reference-DOI: 10.1074/JBC.M109670200

Molecule 1 - NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE
	Chains	:	A, B, C, D, E, F
	EC Number	:	2.7.7.18
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PML208
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	NADD
	Organism Scientific	:	BACILLUS SUBTILIS
	Organism Taxid	:	1423
	Synonym	:	DEAMIDO-NAD(+) PYROPHOSPHORYLASE

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A			D
Biological Unit 2 (1x)	:		B	C
Biological Unit 3 (1x)	:					E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 6)

No.	Name	Count	Type	Full Name
1	DND	6	Ligand/Ion	NICOTINIC ACID ADENINE DINUCLEOTIDE

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	DND	2	Ligand/Ion	NICOTINIC ACID ADENINE DINUCLEOTIDE

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	DND	2	Ligand/Ion	NICOTINIC ACID ADENINE DINUCLEOTIDE

Biological Unit 3 (1, 2)

No.	Name	Count	Type	Full Name
1	DND	2	Ligand/Ion	NICOTINIC ACID ADENINE DINUCLEOTIDE

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	PHE F:7 , GLY F:8 , GLY F:9 , THR F:10 , HIS F:18 , MET F:21 , ASN F:39 , THR F:85 , ILE F:105 , GLY F:106 , MET F:109 , TRP F:116 , TYR F:117 , VAL F:154	BINDING SITE FOR RESIDUE DND F 190
2	AC2	SOFTWARE	PHE E:7 , GLY E:8 , GLY E:9 , THR E:10 , PHE E:11 , HIS E:15 , HIS E:18 , MET E:21 , ASN E:39 , THR E:85 , GLY E:106 , ASP E:108 , MET E:109 , TRP E:116 , TYR E:117 , ARG E:133 , PHE E:152 , VAL E:154	BINDING SITE FOR RESIDUE DND E 201
3	AC3	SOFTWARE	PHE D:7 , GLY D:8 , GLY D:9 , THR D:10 , PHE D:11 , HIS D:15 , HIS D:18 , MET D:21 , ASN D:39 , PRO D:43 , HIS D:44 , LYS D:45 , THR D:85 , GLY D:106 , MET D:109 , TRP D:116 , TYR D:117 , ARG D:133 , PHE D:152 , VAL D:154	BINDING SITE FOR RESIDUE DND D 301
4	AC4	SOFTWARE	PHE C:7 , GLY C:8 , GLY C:9 , THR C:10 , HIS C:15 , HIS C:18 , MET C:21 , ASN C:39 , PRO C:43 , HIS C:44 , LYS C:45 , TYR C:84 , THR C:85 , GLY C:106 , MET C:109 , TRP C:116 , TYR C:117 , ARG C:133 , PHE C:152 , VAL C:154	BINDING SITE FOR RESIDUE DND C 401
5	AC5	SOFTWARE	PHE B:7 , GLY B:8 , GLY B:9 , THR B:10 , PHE B:11 , HIS B:15 , HIS B:18 , MET B:21 , ASN B:39 , PRO B:43 , HIS B:44 , LYS B:45 , TYR B:84 , THR B:85 , GLY B:106 , MET B:109 , TRP B:116 , TYR B:117 , ARG B:133 , PHE B:152 , VAL B:154	BINDING SITE FOR RESIDUE DND B 501
6	AC6	SOFTWARE	PHE A:7 , GLY A:8 , GLY A:9 , THR A:10 , PHE A:11 , HIS A:15 , HIS A:18 , MET A:21 , ASN A:39 , PRO A:43 , HIS A:44 , LYS A:45 , THR A:85 , GLY A:106 , MET A:109 , TRP A:116 , TYR A:117 , ARG A:133 , PHE A:152 , VAL A:154	BINDING SITE FOR RESIDUE DND A 601

(no "SS Bond" information available for 1KAQ)

Asymmetric Unit

No.	Residues
1	Asp A:12	-	Pro A:13
2	Asp B:12	-	Pro B:13
3	Asp C:12	-	Pro C:13
4	Asp D:12	-	Pro D:13
5	Asp E:12	-	Pro E:13
6	Asp F:12	-	Pro F:13

(no "SAP(SNP)/Variant" information available for 1KAQ)

(no "PROSITE Motif" information available for 1KAQ)

(no "Exon" information available for 1KAQ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:186
 aligned with NADD_BACSU | P54455 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
           NADD_BACSU     2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
               SCOP domains d1kaqa_ A: Nicotinamide mononucleotide (NMN) adenylyltransferase                                                                                                                           SCOP domains
               CATH domains 1kaqA00 A:2-187 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhh...eeeeee..............hhhhhhhhhhhhh....eee.hhhhh.....hhhhhhhhhhhhh...eeeeeehhhhhhhh....hhhhhhhhheeee.............eee........hhhhhhhhh..........hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1kaq A   2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181

Chain B from PDB  Type:PROTEIN  Length:186
 aligned with NADD_BACSU | P54455 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
           NADD_BACSU     2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
               SCOP domains d1kaqb_ B: Nicotinamide mononucleotide (NMN) adenylyltransferase                                                                                                                           SCOP domains
               CATH domains 1kaqB00 B:2-187 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eee........hhhhhhhhhhhhhhh...eeee...................hhhhhhhhhh....eee.hhhhh......hhhhhhhh........eeeeehhhhhhhh....hhhhhh...eeee..............ee........hhhhhhhhh..........hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1kaq B   2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181

Chain C from PDB  Type:PROTEIN  Length:186
 aligned with NADD_BACSU | P54455 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
           NADD_BACSU     2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
               SCOP domains d1kaqc_ C: Nicotinamide mononucleotide (NMN) adenylyltransferase                                                                                                                           SCOP domains
               CATH domains 1kaqC00 C:2-187 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhh...eeeeee..............hhhhhhhhhhhh.....eee.hhhhhh....hhhhhhhhhhhhh...eeeeeehhhhhh......hhhhhhhhheeee..............ee........hhhhhhhhh..........hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1kaq C   2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181

Chain D from PDB  Type:PROTEIN  Length:186
 aligned with NADD_BACSU | P54455 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
           NADD_BACSU     2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
               SCOP domains d1kaqd_ D: Nicotinamide mononucleotide (NMN) adenylyltransferase                                                                                                                           SCOP domains
               CATH domains 1kaqD00 D:2-187 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                                      CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhh...eeeeee...hhhhh......hhhhhhhhhhhh.....eee.hhhhh.....hhhhhhhhhhhhh...eeeeeehhhhhhhh....hhhhhhhhheeee.............eee........hhhhhhhhh..........hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1kaq D   2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181

Chain E from PDB  Type:PROTEIN  Length:176
 aligned with NADD_BACSU | P54455 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
           NADD_BACSU     2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
               SCOP domains d1kaqe_ E: Nicotinamide mononucleotide (          NMN) adenylyltransferase                                                                                                                 SCOP domains
               CATH domains 1kaqE00 E:2-187 Tyrosyl-Transfer RNA Syn          thetase , subunit E, domain 1                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhhhh...eeeeee...----------.hhhhhhhh.........eee.hhhhhh....hhhhhhhhhhhhh....eeeeehhhhhhhh....hhhhhhhhheeee.............eee........hhhhhhhhh..........hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1kaq E   2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQI----------DSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 187
                                    11        21        31        41         -|       61        71        81        91       101       111       121       131       141       151       161       171       181      
                                                                  41         52

Chain F from PDB  Type:PROTEIN  Length:167
 aligned with NADD_BACSU | P54455 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:183
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181   
           NADD_BACSU     2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEEN 184
               SCOP domains d1kaqf_ F: Nicotinamide mononucleotide (          NMN) adenylyltransferase                                                                                                              SCOP domains
               CATH domains 1kaqF00 F:2-184 Tyrosyl-Transfer RNA Syn          thetase , subunit E, domain 1                                                                                                         CATH domains
           Pfam domains (1) ----CTP_transf_2-1kaqF01 F:6-162                                                                                                                                 ---------------------- Pfam domains (1)
           Pfam domains (2) ----CTP_transf_2-1kaqF02 F:6-162                                                                                                                                 ---------------------- Pfam domains (2)
           Pfam domains (3) ----CTP_transf_2-1kaqF03 F:6-162                                                                                                                                 ---------------------- Pfam domains (3)
           Pfam domains (4) ----CTP_transf_2-1kaqF04 F:6-162                                                                                                                                 ---------------------- Pfam domains (4)
           Pfam domains (5) ----CTP_transf_2-1kaqF05 F:6-162                                                                                                                                 ---------------------- Pfam domains (5)
           Pfam domains (6) ----CTP_transf_2-1kaqF06 F:6-162                                                                                                                                 ---------------------- Pfam domains (6)
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhh..eeeeee...----------.hhhhhhhhhhhhh....................hhhhhhhhhhh...eeeeeehhhhhh.......hhhhhh..eeee.------.......ee........hhhhhhhhh..........hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kaq F   2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQI----------DSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGV------VETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEEN 184
                                    11        21        31        41         -|       61        71        81        91       101       111       121       131      |141       151       161       171       181   
                                                                  41         52                                                                            131    138

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Adenine nucleotide alpha hydrolase-like (440)

Superfamily: Nucleotidylyl transferase (325)

Family: Adenylyltransferase (56)

Protein domain: Nicotinamide mononucleotide (NMN) adenylyltransferase (22)

Bacillus subtilis [TaxId: 1423] (2)

1a	d1kaqa_	A:
1b	d1kaqb_	B:
1c	d1kaqc_	C:
1d	d1kaqd_	D:
1e	d1kaqe_	E:
1f	d1kaqf_	F:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 (328)

Bacillus subtilis. Organism_taxid: 1423. (7)

1a	1kaqA00	A:2-187
1b	1kaqB00	B:2-187
1c	1kaqC00	C:2-187
1d	1kaqD00	D:2-187
1e	1kaqE00	E:2-187
1f	1kaqF00	F:2-184

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: HUP (230)

Family: CTP_transf_2 (36)

Bacillus subtilis (2)

1a	CTP_transf_2-1kaqF01	F:6-162
1b	CTP_transf_2-1kaqF02	F:6-162
1c	CTP_transf_2-1kaqF03	F:6-162
1d	CTP_transf_2-1kaqF04	F:6-162
1e	CTP_transf_2-1kaqF05	F:6-162
1f	CTP_transf_2-1kaqF06	F:6-162

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (NADD_BACSU | P54455)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0000309	nicotinamide-nucleotide adenylyltransferase activity	Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+.
	GO:0004515	nicotinate-nucleotide adenylyltransferase activity	Catalysis of the reaction: ATP + nicotinate ribonucleotide = diphosphate + deamido-NAD+.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016779	nucleotidyltransferase activity	Catalysis of the transfer of a nucleotidyl group to a reactant.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0034628	'de novo' NAD biosynthetic process from aspartate	The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.
	GO:0009435	NAD biosynthetic process	The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0019363	pyridine nucleotide biosynthetic process	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		DND	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asp A:12 - Pro A:13	[ RasMol ]
		Asp B:12 - Pro B:13	[ RasMol ]
		Asp C:12 - Pro C:13	[ RasMol ]
		Asp D:12 - Pro D:13	[ RasMol ]
		Asp E:12 - Pro E:13	[ RasMol ]
		Asp F:12 - Pro F:13	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1kaq
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	NADD_BACSU \| P54455
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	2.7.7.18
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	NADD_BACSU \| P54455
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	NADD_BACSU \| P54455	:	1kam

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 6)

Sites (6, 6)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 6)

CATH Domains (1, 6)

Pfam Domains (1, 6)

Gene Ontology (11, 11)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File