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(-) Description

Title :  SOLUTION STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN
 
Authors :  J. C. Lougheed, P. J. Domaille, T. M. Handel
Date :  21 Sep 01  (Deposition) - 24 Jul 02  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Sh3 Subdomain, Hormone/Growth Factor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. C. Lougheed, P. J. Domaille, T. M. Handel
Solution Structure And Dynamics Of Melanoma Inhibitory Activity Protein.
J. Biomol. Nmr V. 22 211 2002
PubMed-ID: 11991352  |  Reference-DOI: 10.1023/A:1014961408029
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MELANOMA DERIVED GROWTH REGULATORY PROTEIN
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymMELANOMA INHIBITORY ACTIVITY

 Structural Features

(-) Chains, Units

  
NMR Structure (20x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1K0X)

(-) Sites  (0, 0)

(no "Site" information available for 1K0X)

(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:13 -A:18
2A:36 -A:107

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1K0X)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1K0X)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SH3PS50002 Src homology 3 (SH3) domain profile.MIA_HUMAN43-113  1A:20-90

(-) Exons   (0, 0)

(no "Exon" information available for 1K0X)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:108
 aligned with MIA_HUMAN | Q16674 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:108
                                    33        43        53        63        73        83        93       103       113       123        
            MIA_HUMAN    24 GGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ 131
               SCOP domains d1k0xa_ A: Melanoma inhibitory activity protein                                                              SCOP domains
               CATH domains 1k0xA00 A:1-108 SH3 Domains                                                                                  CATH domains
               Pfam domains -----------------------SH3_2-1k0xA01 A:24-88                                            -------------------- Pfam domains
         Sec.struct. author .........eeee.........eeeee..................eeeeeee.......eeeeeee...........eeee...eeeeee.....eeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------SH3  PDB: A:20-90 UniProt: 43-113                                      ------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 1k0x A   1 MGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ 108
                                    10        20        30        40        50        60        70        80        90       100        

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: SH3 (175)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)
Chain A   (MIA_HUMAN | Q16674)
molecular function
    GO:0008083    growth factor activity    The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation.
biological process
    GO:0008283    cell proliferation    The multiplication or reproduction of cells, resulting in the expansion of a cell population.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MIA_HUMAN | Q166741hjd 1i1j 5ixb

(-) Related Entries Specified in the PDB File

1hjd SOLUTION STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN
1i1j CRYSTAL STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN