Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN AGX1 COMPLEXED WITH UDPGLCNAC
 
Authors :  C. Peneff, Y. Bourne
Date :  28 Aug 01  (Deposition) - 28 Aug 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Nucleotidyltransferase, Alternative Splicing (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. Peneff, P. Ferrari, V. Charrier, Y. Taburet, C. Monnier, V. Zamboni, J. Winter, M. Harnois, F. Fassy, Y. Bourne
Crystal Structures Of Two Human Pyrophosphorylase Isoforms In Complexes With Udpglc(Gal)Nac: Role Of The Alternatively Spliced Insert In The Enzyme Oligomeric Assembly And Active Site Architecture.
Embo J. V. 20 6191 2001
PubMed-ID: 11707391  |  Reference-DOI: 10.1093/EMBOJ/20.22.6191
(for further references see the PDB file header)

(-) Compounds

Molecule 1
    ChainsA, B
    EC Number2.7.7.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPRU277
    Expression System StrainXL1BLUE
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneUAP1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymUDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1UD12Ligand/IonURIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:108 , GLY A:110 , GLY A:111 , MET A:165 , GLN A:196 , PRO A:220 , GLY A:222 , ASN A:223 , CYS A:251 , VAL A:252 , VAL A:289 , GLY A:290 , GLU A:303 , TYR A:304 , ASN A:327 , PHE A:381 , PHE A:383 , PHE A:403 , LYS A:407 , HOH A:908 , HOH A:929 , HOH A:946 , HOH A:1023 , HOH A:1080 , HOH A:1358 , ARG B:453 , LYS B:455 , HOH B:1268BINDING SITE FOR RESIDUE UD1 A 901
2AC2SOFTWARELYS A:455 , LEU B:108 , GLY B:110 , GLY B:111 , MET B:165 , GLN B:196 , PRO B:220 , GLY B:222 , ASN B:223 , CYS B:251 , VAL B:252 , VAL B:289 , GLY B:290 , GLU B:303 , TYR B:304 , ASN B:327 , PHE B:381 , PHE B:383 , PHE B:403 , LYS B:407 , HOH B:905 , HOH B:918 , HOH B:1082 , HOH B:1086 , HOH B:1234 , HOH B:1269BINDING SITE FOR RESIDUE UD1 B 902

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1JV1)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ala A:488 -Pro A:489
2Ala B:488 -Pro B:489

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 2)

Asymmetric/Biological Unit (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_014935P418HUAP1_HUMANPolymorphism1128539A/BP418H

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1JV1)

(-) Exons   (10, 20)

Asymmetric/Biological Unit (10, 20)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.3bENST000003679253bENSE00001445937chr1:162535827-162536138312UAP1_HUMAN1-94942A:1-94 (gaps)
B:3-94 (gaps)
94
92
1.4ENST000003679254ENSE00000958805chr1:162546567-162546771205UAP1_HUMAN94-162692A:94-162
B:94-162
69
69
1.5bENST000003679255bENSE00000958806chr1:162549218-162549393176UAP1_HUMAN162-221602A:162-221
B:162-221
60
60
1.6aENST000003679256aENSE00000958807chr1:162551077-162551249173UAP1_HUMAN221-278582A:221-278
B:221-278
58
58
1.7aENST000003679257aENSE00000958808chr1:162557265-162557458194UAP1_HUMAN279-343652A:279-343
B:279-343
65
65
1.8ENST000003679258ENSE00000958809chr1:162558483-162558623141UAP1_HUMAN343-390482A:343-390
B:343-390
48
48
1.9ENST000003679259ENSE00000958810chr1:162560113-162560301189UAP1_HUMAN390-453642A:390-453
B:390-453
64
64
1.10aENST0000036792510aENSE00000958811chr1:162562522-16256257251UAP1_HUMAN453-470182A:453-453
B:453-453
1
1
1.11bENST0000036792511bENSE00000958812chr1:162567582-16256764867UAP1_HUMAN470-492232A:454-475
B:454-475
22
22
1.12bENST0000036792512bENSE00001445936chr1:162569061-162569621561UAP1_HUMAN493-522302A:476-501
B:476-500
26
25

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:490
 aligned with UAP1_HUMAN | Q16222 from UniProtKB/Swiss-Prot  Length:522

    Alignment length:518
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510        
           UAP1_HUMAN     1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRSATNGKSETITADVNHNLKDANDVPIQCEISPLISYAGEGLESYVADKEFHAPLIIDENGVHELV 518
               SCOP domains d1jv1a_ A: UDP-N-acetylglucosamine pyrophosphorylase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1jv1A01 A:1-437 Spore Coat Polysaccharide Biosynthesis P           rotein SpsA; Chain A                                                                                                                                                                                                                                                                                                                                                              ----------------                 ------------------------------------------------ CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.-----------.....hhh.eee...hhhhhhhhhhhhhhhhhh..eeeeee............hhhhh........hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhhhhhhh.eeeee..eee.ee......eee..ee.eee.hhhhhhhhhhhhhhhhhhhhh...eeeeee.........hhhhhhhhhhh...eeeeeee.........eeeee..eeeeehhhhhhhhhhhh..........eeeeeeeeeehhhhhhhhhhhhhhh..eeeee...ee.....ee......eeeee.hhhhhhhhh..eeeeeehhhhhh.............hhhhhhhhhhhhhhhhhhhh..ee.............-----------------..........eee..........hhhhhh..ee...eeee..eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: A:1-94 (gaps) UniProt: 1-94                                                   -------------------------------------------------------------------Exon 1.5b  PDB: A:162-221 UniProt: 162-221                  ---------------------------------------------------------Exon 1.7a  PDB: A:279-343 UniProt: 279-343                       -------------------------------------------------------------------------------------------------------------Exon 1.10a        ----------------------Exon 1.12b  PDB: A:476-501 Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------Exon 1.4  PDB: A:94-162 UniProt: 94-162                              ----------------------------------------------------------Exon 1.6a  PDB: A:221-278 UniProt: 221-278                ----------------------------------------------------------------Exon 1.8  PDB: A:343-390 UniProt: 343-390       -------------------------------------------------------------------------------Exon 1.11b [INCOMPLETE]-------------------------- Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:390-453 UniProt: 390-453                       ----------------------------------------------------------------- Transcript 1 (3)
                 1jv1 A   1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGF-----------RMEPVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPR-----------------LKDANDVPIQCEISPLISYAGEGLESYVADKEFHAPLIIDENGVHELV 501
                                    10        20        30        40        50     |   -       |70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450  |      -         -|      463       473       483       493        
                                                                                  56          68                                                                                                                                                                                                                                                                                                                                                                                              453               454                                               

Chain B from PDB  Type:PROTEIN  Length:485
 aligned with UAP1_HUMAN | Q16222 from UniProtKB/Swiss-Prot  Length:522

    Alignment length:515
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512     
           UAP1_HUMAN     3 INDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRSATNGKSETITADVNHNLKDANDVPIQCEISPLISYAGEGLESYVADKEFHAPLIIDENGVHEL 517
               SCOP domains d1jv1b_ B: UDP-N-acety     lglucosamine pyrophosphoryl        ase                                                                                                                                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1jv1B01 B:3-437 Spore      Coat Polysaccharide Biosynt        hesis Protein SpsA; Chain A                                                                                                                                                                                                                                                                                                                                                          ----------------                 ----------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh.hhhhhh....-----.hhhhhhhh..hhhhhhhhhhhhhh..--------....ee..hhh.eee...hhhhhhhhhhhhhhhhhh..eeeeee............hhhhh........hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhhhhhhh.eeeee..eee.........eee..ee.eee.hhhhhhhhhhhhhhhhhhhhhh..eeeeee.........hhhhhhhhhhhh..eeeeeee.........eeeee..eeeeehhhhhhhhhhhh..........eeeeeeeeeehhhhhhhhhhhhhhh..eeeee...eee...eee......eeeee.hhhhhhhhh..eeeee.hhhhhh.............hhhhhhhhhhhhhhhhhhhh..ee.............-----------------..........eee..........hhhhhh..ee...eeee..eeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H--------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: B:3-94 (gaps) UniProt: 1-94 [INCOMPLETE]                                    -------------------------------------------------------------------Exon 1.5b  PDB: B:162-221 UniProt: 162-221                  ---------------------------------------------------------Exon 1.7a  PDB: B:279-343 UniProt: 279-343                       -------------------------------------------------------------------------------------------------------------Exon 1.10a        ----------------------Exon 1.12b  PDB: B:476-50 Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------------------------------Exon 1.4  PDB: B:94-162 UniProt: 94-162                              ----------------------------------------------------------Exon 1.6a  PDB: B:221-278 UniProt: 221-278                ----------------------------------------------------------------Exon 1.8  PDB: B:343-390 UniProt: 343-390       -------------------------------------------------------------------------------Exon 1.11b [INCOMPLETE]------------------------- Transcript 1 (2)
           Transcript 1 (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:390-453 UniProt: 390-453                       ---------------------------------------------------------------- Transcript 1 (3)
                 1jv1 B   3 INDLKLTLSKAGQEHLLRFWNE-----QVELYAELQAMNFEELNFFFQKAIEGF--------VDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPR-----------------LKDANDVPIQCEISPLISYAGEGLESYVADKEFHAPLIIDENGVHEL 500
                                    12        22 |     |32        42        52   |     -  |     72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452|        -       455       465       475       485       495     
                                                24    30                        56       65                                                                                                                                                                                                                                                                                                                                                                                                 453               454                                              

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1JV1)

(-) Gene Ontology  (13, 13)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (UAP1_HUMAN | Q16222)
molecular function
    GO:0003977    UDP-N-acetylglucosamine diphosphorylase activity    Catalysis of the reaction: N-acetyl-alpha-D-glucosamine 1-phosphate + UTP = diphosphate + UDP-N-acetyl-alpha-D-glucosamine.
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0016779    nucleotidyltransferase activity    Catalysis of the transfer of a nucleotidyl group to a reactant.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0070569    uridylyltransferase activity    Catalysis of the transfer of an uridylyl group to an acceptor.
biological process
    GO:0006048    UDP-N-acetylglucosamine biosynthetic process    The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
    GO:0006047    UDP-N-acetylglucosamine metabolic process    The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    UD1  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ala A:488 - Pro A:489   [ RasMol ]  
    Ala B:488 - Pro B:489   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1jv1
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  UAP1_HUMAN | Q16222
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.7.7.-
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  UAP1_HUMAN | Q16222
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        UAP1_HUMAN | Q162221jv3 1jvd 1jvg

(-) Related Entries Specified in the PDB File

1jv3 STRUCTURE OF AGX1 COMPLEXED WITH UDPGALNAC
1jvd STRUCTURE OF AGX2 COMPLEXED WITH UDPGLCNAC
1jvg STRUCTURE OF AGX2 COMPLEXED WITH UDPGALNAC