1J1Z - JenaLib

Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS HB8 ARGININOSUCCINATE SYNTHETASE IN COMPLEX WITH SUBSTRATE

Authors :   M. Goto, K. Hirotsu, Riken Structural Genomics/Proteomics Initiative (Rsgi)

Date :   24 Dec 02 (Deposition) - 22 Apr 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Ligase, Atp-Binding, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Goto, R. Omi, I. Miyahara, M. Sugahara, K. Hirotsu
Structures Of Argininosuccinate Synthetase In Enzyme-Atp-Substrates And Enzyme-Amp-Product Forms
J. Biol. Chem. V. 278 22964 2003
PubMed-ID: 12684518 | Reference-DOI: 10.1074/JBC.M213198200
(for further references see the PDB file header)

Molecule 1 - ARGININOSUCCINATE SYNTHETASE
	Chains	:	A, B, C, D
	EC Number	:	6.3.4.5
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET11A
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	HB8
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 12)

No.	Name	Count	Type	Full Name
1	ASP	4	Mod. Amino Acid	ASPARTIC ACID
2	ATP	4	Ligand/Ion	ADENOSINE-5'-TRIPHOSPHATE
3	CIR	4	Ligand/Ion	CITRULLINE

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ALA A:6 , SER A:8 , ASP A:12 , THR A:13 , PHE A:31 , THR A:32 , ALA A:33 , GLN A:37 , ARG A:92 , HIS A:113 , GLY A:114 , PHE A:125 , SER A:173 , ASP A:175 , CIR A:520 , ASP A:530	BINDING SITE FOR RESIDUE ATP A 510
02	AC2	SOFTWARE	ASP A:2530 , ALA B:6 , TYR B:7 , SER B:8 , GLY B:10 , ASP B:12 , THR B:13 , PHE B:31 , THR B:32 , ALA B:33 , GLN B:37 , ARG B:92 , HIS B:113 , GLY B:114 , PHE B:125 , HOH B:1506	BINDING SITE FOR RESIDUE ATP B 2510
03	AC3	SOFTWARE	ASP A:3530 , ALA C:6 , SER C:8 , ASP C:12 , THR C:13 , PHE C:31 , THR C:32 , ALA C:33 , GLN C:37 , ARG C:92 , ILE C:95 , HIS C:113 , GLY C:114 , ALA C:115 , PHE C:125 , SER C:173 , ASP C:175 , HOH C:1541 , CIR C:3520	BINDING SITE FOR RESIDUE ATP C 3510
04	AC4	SOFTWARE	ASP A:4530 , ALA D:6 , TYR D:7 , SER D:8 , GLY D:10 , LEU D:11 , ASP D:12 , THR D:13 , PHE D:31 , ALA D:33 , GLN D:37 , ARG D:92 , HIS D:113 , GLY D:114 , PHE D:125 , HOH D:1479 , CIR D:4520	BINDING SITE FOR RESIDUE ATP D 4510
05	AC5	SOFTWARE	TYR A:84 , THR A:88 , SER A:89 , ASN A:120 , ARG A:124 , SER A:173 , MET A:174 , SER A:182 , GLU A:184 , GLU A:258 , TYR A:270 , TYR A:310 , ATP A:510 , ASP A:530 , HOH A:1017	BINDING SITE FOR RESIDUE CIR A 520
06	AC6	SOFTWARE	ASP A:2530 , TYR B:84 , THR B:88 , SER B:89 , ASN B:120 , ARG B:124 , SER B:173 , MET B:174 , ASP B:175 , SER B:182 , GLU B:184 , GLU B:258 , TYR B:270 , TYR B:310 , HOH B:1039	BINDING SITE FOR RESIDUE CIR B 2520
07	AC7	SOFTWARE	ASP A:3530 , TYR C:84 , THR C:88 , SER C:89 , ASN C:120 , ASP C:121 , ARG C:124 , SER C:173 , MET C:174 , SER C:182 , GLU C:184 , GLU C:258 , TYR C:270 , TYR C:310 , ATP C:3510	BINDING SITE FOR RESIDUE CIR C 3520
08	AC8	SOFTWARE	HOH A:1124 , ASP A:4530 , TYR D:84 , THR D:88 , SER D:89 , ASN D:120 , ARG D:124 , SER D:173 , MET D:174 , ASP D:175 , SER D:182 , GLU D:184 , GLU D:258 , TYR D:270 , TYR D:310 , ATP D:4510	BINDING SITE FOR RESIDUE CIR D 4520
09	AC9	SOFTWARE	ALA A:115 , THR A:116 , GLY A:119 , ASN A:120 , ASP A:121 , ATP A:510 , CIR A:520 , HOH A:1017 , HOH A:1071 , HOH A:1159	BINDING SITE FOR RESIDUE ASP A 530
10	BC1	SOFTWARE	HOH A:1049 , ALA B:115 , THR B:116 , GLY B:119 , ASN B:120 , ASP B:121 , HOH B:1039 , HOH B:1099 , ATP B:2510 , CIR B:2520	BINDING SITE FOR RESIDUE ASP A 2530
11	BC2	SOFTWARE	HOH A:1004 , HOH A:1117 , ALA C:115 , THR C:116 , GLY C:119 , ASN C:120 , ASP C:121 , HOH C:1028 , ATP C:3510 , CIR C:3520	BINDING SITE FOR RESIDUE ASP A 3530
12	BC3	SOFTWARE	HOH A:1124 , HOH A:1161 , ALA D:115 , THR D:116 , GLY D:119 , ASN D:120 , ASP D:121 , GLU D:184 , HOH D:1212 , ATP D:4510 , CIR D:4520	BINDING SITE FOR RESIDUE ASP A 4530

(no "SS Bond" information available for 1J1Z)

(no "Cis Peptide Bond" information available for 1J1Z)

(no "SAP(SNP)/Variant" information available for 1J1Z)

Asymmetric/Biological Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ARGININOSUCCIN_SYN_1	PS00564	Argininosuccinate synthase signature 1.	ASSY_THET8	6-14	4	A:6-14 B:6-14 C:6-14 D:6-14
2	ARGININOSUCCIN_SYN_2	PS00565	Argininosuccinate synthase signature 2.	ASSY_THET8	114-125	4	A:114-125 B:114-125 C:114-125 D:114-125

(no "Exon" information available for 1J1Z)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:386
 aligned with ASSY_THET8 | P59846 from UniProtKB/Swiss-Prot  Length:400

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
           ASSY_THET8     1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPVTQEKPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSFDEAGGYDQKDAEGFIKIQALRLRVRALVER 395
               SCOP domains d1j1za1 A:1-165 Argininosuccinate synthetase, N-terminal domain                                                                                                           d1j1za2 A:171-395 Argininosuccinate synthetase, C-terminal domain                                                                                                                                                                 SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhh...eeehhhhh....hhhhhhhhhhhh.....-----..eeee....eeee.hhhhh..............hhhhh....eeeeeeee..eeeee..ee.hhhhhhhhhhhhhhhh...eeeeeee.....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...eeeeeeee..eeeeeeee......hhhhh..----..hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ARGININOS---------------------------------------------------------------------------------------------------ARGININOSUCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1j1z A   1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSF----GYDQKDAEGFIKIQALRLRVRALVER 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    |    -|      180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360    |  370       380       390     
                                                                                                                                                                                              165   171                                                                                                                                                                                               365  370

Chain B from PDB  Type:PROTEIN  Length:386
 aligned with ASSY_THET8 | P59846 from UniProtKB/Swiss-Prot  Length:400

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
           ASSY_THET8     1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPVTQEKPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSFDEAGGYDQKDAEGFIKIQALRLRVRALVER 395
               SCOP domains d1j1zb1 B:1-165 Argininosuccinate synthetase, N-terminal domain                                                                                                           d1j1zb2 B:171-395 Argininosuccinate synthetase, C-terminal domain                                                                                                                                                                 SCOP domains
               CATH domains 1j1zB01 B:1-171 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                      1j1zB02 B:172-395 Argininosuccinate synthetase, chain A, domain 2                                                                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh..hhhhh.......hhhhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhh...eeehhhhh....hhhhhhhhhhhh.....-----..eeee....eeee.hhhhh.......................eeeeeeee..eeeee..ee.hhhhhhhhhhhhhhhh...eeeeeee.....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...eeeeeeee..eeeeeeee......hhhhh..----..hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ARGININOS---------------------------------------------------------------------------------------------------ARGININOSUCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1j1z B   1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSF----GYDQKDAEGFIKIQALRLRVRALVER 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    |    -|      180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360    |  370       380       390     
                                                                                                                                                                                              165   171                                                                                                                                                                                               365  370

Chain C from PDB  Type:PROTEIN  Length:386
 aligned with ASSY_THET8 | P59846 from UniProtKB/Swiss-Prot  Length:400

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
           ASSY_THET8     1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPVTQEKPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSFDEAGGYDQKDAEGFIKIQALRLRVRALVER 395
               SCOP domains d1j1zc1 C:1-165 Argininosuccinate synthetase, N-terminal domain                                                                                                           d1j1zc2 C:171-395 Argininosuccinate synthetase, C-terminal domain                                                                                                                                                                 SCOP domains
               CATH domains 1j1zC01 C:1-171 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                      1j1zC02 C:172-395 Argininosuccinate synthetase, chain A, domain 2                                                                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh..hhhhh.......hhhhhhhhhhhhhhhh...eee.......hhhhhhhhhhhhhh...eeehhhhhh...hhhhhhhhhhhh.....-----..eeee....eeee.hhhhh..............hhhhh....eeeeeeee..eeeee..ee.hhhhhhhhhhhhhhhh...eeeeeee.....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...eeeeeeee..eeeeeeee......hhhhh..----..hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ARGININOS---------------------------------------------------------------------------------------------------ARGININOSUCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1j1z C   1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSF----GYDQKDAEGFIKIQALRLRVRALVER 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    |    -|      180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360    |  370       380       390     
                                                                                                                                                                                              165   171                                                                                                                                                                                               365  370

Chain D from PDB  Type:PROTEIN  Length:386
 aligned with ASSY_THET8 | P59846 from UniProtKB/Swiss-Prot  Length:400

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
           ASSY_THET8     1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPVTQEKPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSFDEAGGYDQKDAEGFIKIQALRLRVRALVER 395
               SCOP domains d1j1zd1 D:1-165 Argininosuccinate synthetase, N-terminal domain                                                                                                           d1j1zd2 D:171-395 Argininosuccinate synthetase, C-terminal domain                                                                                                                                                                 SCOP domains
               CATH domains 1j1zD01 D:1-171 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1                                                                                                      1j1zD02 D:172-395 Argininosuccinate synthetase, chain A, domain 2                                                                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh..hhhhh......hhhhhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhh...eeehhhhhh...hhhhhhhhhhhh.....-----..eeee....eeee.hhhhh..............hhhhh....eeeeeeee..eeeee..ee.hhhhhhhhhhhhhhhh...eeeeeee.....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...eeeeeeee..eeeeeeee......hhhhh..----..hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ARGININOS---------------------------------------------------------------------------------------------------ARGININOSUCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1j1z D   1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSF----GYDQKDAEGFIKIQALRLRVRALVER 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160    |    -|      180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360    |  370       380       390     
                                                                                                                                                                                              165   171                                                                                                                                                                                               365  370

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 (328)

Thermus thermophilus. Organism_taxid: 274. (11)

1a	1j1zB01	B:1-171
1b	1j1zC01	C:1-171
1c	1j1zD01	D:1-171

Architecture: Alpha-Beta Complex (3881)

Topology: Argininosuccinate synthetase, chain A, domain 2 (13)

Homologous Superfamily: Argininosuccinate synthetase, chain A, domain 2 (13)

Thermus thermophilus. Organism_taxid: 274. (7)

2a	1j1zB02	B:172-395
2b	1j1zC02	C:172-395
2c	1j1zD02	D:172-395

(no "Pfam Domain" information available for 1J1Z)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (ASSY_THET8 | P59846)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004055	argininosuccinate synthase activity	Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.
	GO:0016874	ligase activity	Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
	GO:0006526	arginine biosynthetic process	The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
	GO:0008652	cellular amino acid biosynthetic process	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1j1z)

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Access by PDB/NDB ID
	1j1z
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	ASSY_THET8 \| P59846
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

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	6.3.4.5
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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		Disease Information	:	OMIM

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
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		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	ASSY_THET8 \| P59846
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	ASSY_THET8 \| P59846	:	1j20 1j21 1kh1 1kh2 1kh3 1kor

1j20	1J20 COMPLEXED WITH AMP, AS1 AND SO4
1j21	1J21 COMPLEXED WITH ATP AND CIR RELATED ID: TTK003000039.5 RELATED DB: TARGETDB

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 12)

Sites (12, 12)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 8)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 8)

CATH Domains (2, 6)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File