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(-) Description

Title :  THE STRUCTURE OF NATIVE ID.343 FROM THERMUS THERMOPHILUS
 
Authors :  T. Wada, M. Shirouzu, S. -Y. Park, J. R. Tame, S. Kuramitsu, S. Yokoyama, Structural Genomics/Proteomics Initiative (Rsgi)
Date :  05 Mar 02  (Deposition) - 15 Jul 03  (Release) - 16 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Wada, M. Shirouzu, T. Terada, Y. Ishizuka, T. Matsuda, T. Kigawa, S. Kuramitsu, S. Y. Park, J. R. Tame, S. Yokoyama
Structure Of A Conserved Coa-Binding Protein Synthesized By A Cell-Free System.
Acta Crystallogr. , Sect. D V. 59 1213 2003
PubMed-ID: 12832765  |  Reference-DOI: 10.1107/S0907444903010515

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN TT1466
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11B
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1IUK)

(-) Sites  (0, 0)

(no "Site" information available for 1IUK)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1IUK)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1IUK)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1IUK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1IUK)

(-) Exons   (0, 0)

(no "Exon" information available for 1IUK)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:136
 aligned with Q8GHJ5_THETH | Q8GHJ5 from UniProtKB/TrEMBL  Length:140

    Alignment length:136
                                    10        20        30        40        50        60        70        80        90       100       110       120       130      
         Q8GHJ5_THETH     1 MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVADRCLMVEHKRLFRG 136
               SCOP domains d1iuka_ A: Hypothetical protein TT1466                                                                                                   SCOP domains
               CATH domains 1iukA00 A:1-136 NAD(P)-binding Rossmann-like Domain                                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.eeeee.......hhhhhhhhhhhhh..eeeeehhhhh..ee..ee...hhhhh.....eeee..hhhhhh.hhhhhhhhh...eee.....hhhhhhhhhhh...ee...hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1iuk A   1 MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVADRCLMVEHKRLFRG 136
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1IUK)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q8GHJ5_THETH | Q8GHJ5)
molecular function
    GO:0048037    cofactor binding    Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.

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  1iuk
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8GHJ5_THETH | Q8GHJ5: 1iul

(-) Related Entries Specified in the PDB File

1iul 1IUL CONTAINS CELL-FREE ID.343 FROM THERMUS THERMOPHILUS RELATED ID: TTK003001466.1 RELATED DB: TARGETDB