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(-) Description

Title :  CRYSTAL STRUCTURE OF TWO D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE COMPLEXES: A CASE OF ASYMMETRY
 
Authors :  Y. -Q. Shen, S. -Y. Song, Z. -J. Lin
Date :  20 Apr 01  (Deposition) - 31 Jul 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Gapdh, Asymmetry, Snad, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Q. Shen, S. Y. Song, Z. J. Lin
Structures Of D-Glyceraldehyde-3-Phosphate Dehydrogenase Complexed With Coenzyme Analogues.
Acta Crystallogr. , Sect. D V. 58 1287 2002
PubMed-ID: 12136140  |  Reference-DOI: 10.1107/S090744490200999X
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE
    Chains: A, B, C, D
    EC Number: 1.2.1.12
    Organism Common: SOUTH CHINA SEA LOBSTER
    Organism Scientific: PALINURUS VERSICOLOR
    Organism Taxid: 82835
    Synonym: GAPDH
    Tissue: TAIL MUSCLE

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric/Biological Unit (2, 12)
No.NameCountTypeFull Name
1SND4Ligand/IonTHIONICOTINAMIDE-ADENINE-DINUCLEOTIDE
2SO48Ligand/IonSULFATE ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:148 , THR A:208 , GLY A:209 , ALA A:210 , HOH A:562BINDING SITE FOR RESIDUE SO4 A 501
02AC2SOFTWARESER B:148 , THR B:150 , THR B:208 , GLY B:209 , ALA B:210 , HOH B:563BINDING SITE FOR RESIDUE SO4 B 502
03AC3SOFTWARESER C:148 , THR C:208 , GLY C:209 , ALA C:210 , HOH C:555BINDING SITE FOR RESIDUE SO4 C 503
04AC4SOFTWARESER D:148 , THR D:150 , THR D:208 , GLY D:209 , ALA D:210 , HOH D:552BINDING SITE FOR RESIDUE SO4 D 504
05AC5SOFTWARETHR A:179 , THR A:181 , ARG A:231 , SND A:335BINDING SITE FOR RESIDUE SO4 A 505
06AC6SOFTWARETHR B:179 , THR B:181 , ARG B:231BINDING SITE FOR RESIDUE SO4 B 506
07AC7SOFTWARETHR C:179 , THR C:181 , ARG C:231BINDING SITE FOR RESIDUE SO4 C 507
08AC8SOFTWARETHR D:179 , THR D:181 , ARG D:231 , SND D:338BINDING SITE FOR RESIDUE SO4 D 508
09AC9SOFTWAREASN A:6 , GLY A:7 , PHE A:8 , GLY A:9 , ARG A:10 , ILE A:11 , ASP A:32 , PRO A:33 , PHE A:34 , ILE A:35 , MET A:77 , SER A:95 , THR A:96 , SER A:119 , ALA A:120 , SO4 A:505 , HOH A:506 , HOH A:559 , HOH A:560BINDING SITE FOR RESIDUE SND A 335
10BC1SOFTWAREASN B:6 , GLY B:7 , PHE B:8 , GLY B:9 , ARG B:10 , ILE B:11 , ASN B:31 , ASP B:32 , PRO B:33 , PHE B:34 , ILE B:35 , MET B:77 , THR B:96 , GLY B:97 , PHE B:99 , SER B:119 , ALA B:120 , HOH B:509 , HOH B:531 , HOH B:572BINDING SITE FOR RESIDUE SND B 336
11BC2SOFTWAREASN C:6 , GLY C:7 , GLY C:9 , ARG C:10 , ILE C:11 , ASN C:31 , ASP C:32 , PRO C:33 , PHE C:34 , ILE C:35 , MET C:77 , SER C:95 , THR C:96 , GLY C:97 , PHE C:99 , SER C:119 , CYS C:149 , ASN C:313 , TYR C:317 , HOH C:547BINDING SITE FOR RESIDUE SND C 337
12BC3SOFTWAREHOH B:555 , ASN D:6 , PHE D:8 , GLY D:9 , ARG D:10 , ILE D:11 , ASN D:31 , ASP D:32 , PRO D:33 , PHE D:34 , MET D:77 , THR D:96 , GLY D:97 , PHE D:99 , SER D:119 , ALA D:120 , CYS D:149 , ASN D:313 , SO4 D:508 , HOH D:511 , HOH D:515 , HOH D:538 , HOH D:542BINDING SITE FOR RESIDUE SND D 338

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1IHX)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1IHX)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1IHX)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3P_PANVR146-153
 
 
 		  4A:147-154
B:147-154
C:147-154
D:147-154

(-) Exons   (0, 0)

(no "Exon" information available for 1IHX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:333
 aligned with G3P_PANVR | P56649 from UniProtKB/Swiss-Prot  Length:333

    Alignment length:333
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330   
            G3P_PANVR     1 SKIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 333
               SCOP domains d1ihxa1 A:1-148,A:313-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                         d1ihxa2 A:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d1ihxa1                SCOP domains
               CATH domains 1ihxA01 A:1-147,A:314-333 NAD(P)-binding Rossmann-like Domain                                                                                     1ihxA02 A:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             1ihxA01             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee..............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee................hhhhh......eee..hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....eeee..eeeeeeeehhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ihx A   1 SKIGINGFGRIGRLVLRTALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKVEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 334
                                    10        20  ||    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331   
                                                 23|                                                                                                                                                                                                                                                                                                                     
                                                  25                                                                                                                                                                                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:333
 aligned with G3P_PANVR | P56649 from UniProtKB/Swiss-Prot  Length:333

    Alignment length:333
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330   
            G3P_PANVR     1 SKIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 333
               SCOP domains d1ihxb1 B:1-148,B:313-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                         d1ihxb2 B:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d1ihxb1                SCOP domains
               CATH domains 1ihxB01 B:1-147,B:314-333 NAD(P)-binding Rossmann-like Domain                                                                                     1ihxB02 B:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             1ihxB01             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhhh..eeee..............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee................hhhhh......eee..hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....eeee..eeeeeeeehhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ihx B   1 SKIGINGFGRIGRLVLRTALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKVEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 334
                                    10        20  ||    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331   
                                                 23|                                                                                                                                                                                                                                                                                                                     
                                                  25                                                                                                                                                                                                                                                                                                                     


Chain C from PDB  Type:PROTEIN  Length:333
 aligned with G3P_PANVR | P56649 from UniProtKB/Swiss-Prot  Length:333

    Alignment length:333
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330   
            G3P_PANVR     1 SKIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 333
               SCOP domains d1ihxc1 C:1-148,C:313-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                         d1ihxc2 C:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d1ihxc1                SCOP domains
               CATH domains 1ihxC01 C:1-147,C:314-333 NAD(P)-binding Rossmann-like Domain                                                                                     1ihxC02 C:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             1ihxC01             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh..........eee...eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhh....eeee..............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee...............hhhhh......eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhh.......eeee....hhhhhh.....eeee....eeee..eeeeeeee..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ihx C   1 SKIGINGFGRIGRLVLRTALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKVEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 334
                                    10        20  ||    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331   
                                                 23|                                                                                                                                                                                                                                                                                                                     
                                                  25                                                                                                                                                                                                                                                                                                                     


Chain D from PDB  Type:PROTEIN  Length:333
 aligned with G3P_PANVR | P56649 from UniProtKB/Swiss-Prot  Length:333

    Alignment length:333
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330   
            G3P_PANVR     1 SKIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 333
               SCOP domains d1ihxd1 D:1-148,D:313-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                         d1ihxd2 D:149-312 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                  d1ihxd1                SCOP domains
               CATH domains 1ihxD01 D:1-147,D:314-333 NAD(P)-binding Rossmann-like Domain                                                                                     1ihxD02 D:148-313 Dihydrodipicolinate Reductase; domain 2                                                                                                             1ihxD01             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhh.....eeeee....hhhhhhhhhhh..........eee...eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhh....eeee..............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeeee...............hhhhh......eee..hhhhhhhhhhhhhh..eeeeeeee.....eeeeeeeee....hhhhhhhhhhhhh.......eeee....hhhhhh.....eeee....eeee..eeeeeeee..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ihx D   1 SKIGINGFGRIGRLVLRTALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKVEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQKVDSA 334
                                    10        20  ||    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331   
                                                 23|                                                                                                                                                                                                                                                                                                                     
                                                  25
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1IHX)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (G3P_PANVR | P56649)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0004365    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity    Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        G3P_PANVR | P56649: 1crw 1dss 1ihy 1szj

(-) Related Entries Specified in the PDB File

1ihy 1IHY CONTAINS THE SAME PROTEIN COMPLEXED WITH ADP-RIBOSE