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(-) Description

Title :  MULTI-CONFORMATION CRYSTAL STRUCTURE OF GGBR5CGCC
 
Authors :  J. M. Vargason, K. Henderson, P. S. Ho
Date :  18 Apr 01  (Deposition) - 18 Jun 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  B To A Dna Transition, Dna Transition, Structural Transition (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. M. Vargason, K. Henderson, P. S. Ho
A Crystallographic Map Of The Transition From B-Dna To A-Dna.
Proc. Natl. Acad. Sci. Usa V. 98 7265 2001
PubMed-ID: 11390969  |  Reference-DOI: 10.1073/PNAS.121176898
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(*GP*GP*(CBR)P*GP*CP*C)-3'
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1CBR8Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

(no "Site" information available for 1IH6)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1IH6)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1IH6)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA  Length:6
                                     
                  1ih6 A  1 GGcGCC  6
                              |   
                              |   
                              3-CBR


Chain B from PDB  Type:DNA  Length:6
                                     
                  1ih6 B  7 GGcGCC 12
                              |   
                              9-CBR


Chain C from PDB  Type:DNA  Length:6
                                     
                  1ih6 C 13 GGcGCC 18
                              |   
                              |   
                             15-CBR


Chain D from PDB  Type:DNA  Length:6
                                     
                  1ih6 D 19 GGcGCC 24
                              |   
                              |   
                             21-CBR


Chain E from PDB  Type:DNA  Length:6
                                     
                  1ih6 E 25 GGcGCC 30
                              |   
                              |   
                             27-CBR


Chain F from PDB  Type:DNA  Length:6
                                     
                  1ih6 F 31 GGcGCC 36
                              |   
                              |   
                             33-CBR


Chain G from PDB  Type:DNA  Length:6
                                     
                  1ih6 G 37 GGcGCC 42
                              |   
                              |   
                             39-CBR


Chain H from PDB  Type:DNA  Length:6
                                     
                  1ih6 H 43 GGcGCC 48
                              |   
                              |   
                             45-CBR
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 Classification and Annotation

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(no "SCOP Domain" information available for 1IH6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1IH6)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1ih1 CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC RESOLVED TO 2.0 ANGSTROM RESOLUTION
1ih2 CRYSTAL STRUCTURE OF GGBR5CGBR5CC
1ih3 MULTI-CONFORMATION CRYSTAL STRUCTURE OF GGM5CGM5CC
1ih4 MULTI-CONFORMATION CRYSTAL STRUCTURE OF GGM5CGCC