1I9V | TR0004 - JenaLib

Title :   CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX

Authors :   N. E. Mikkelsen, K. Johansson, A. Virtanen, L. A. Kirsebom

Date :   21 Mar 01 (Deposition) - 04 Jun 01 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.60

Chains :   Asym./Biol. Unit : A

Keywords :   Amino-Acid Transport, Yeast, Phe-Trna, Phenylalanine, Transfer Rna, Aminoglycoside, Neomycin B (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   N. E. Mikkelsen, K. Johansson, A. Virtanen, L. A. Kirsebom
Aminoglycoside Binding Displaces A Divalent Metal Ion In A Trna-Neomycin B Complex.
Nat. Struct. Biol. V. 8 510 2001
PubMed-ID: 11373618 | Reference-DOI: 10.1038/88569
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 6)

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	G A:20 , A A:23 , A A:44 , G A:45	BINDING SITE FOR RESIDUE NMY A 200
2	AC2	SOFTWARE	G A:20 , A A:21	BINDING SITE FOR RESIDUE MG A 301
3	AC3	SOFTWARE	G A:19 , HOH A:127	BINDING SITE FOR RESIDUE MG A 302
4	AC4	SOFTWARE	U A:12 , HOH A:130	BINDING SITE FOR RESIDUE MG A 303

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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PROSITE Motifs (0, 0)

Exons (0, 0)

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Asymmetric/Biological Unit

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Chain A from PDB  Type:RNA  Length:76
                                                                                                           
                  1i9v A  1 GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAgAUCUGGAGGUCCUGUGuUCGAUCCACAGAAUUCGCACCA 76
                                    10        20        30      | 40        50   |    60        70      
                                                               37-YG            54-5MU

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Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (0, 0)

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