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(-) Description

Title :  CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM LEISHMANIA MEXICANA: IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN AND A NEW POSITION FOR THE INORGANIC PHOSPHATE BINDING SITE
 
Authors :  H. Kim, I. K. Feil, C. L. M. J. Verlinde, P. H. Petra, W. G. J. Hol
Date :  01 Aug 95  (Deposition) - 07 Dec 95  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Oxidoreductase (Aldehyde(D)-Nad+(A)) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Kim, I. K. Feil, C. L. Verlinde, P. H. Petra, W. G. Hol
Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase From Leishmania Mexicana: Implications For Structure-Based Drug Design And A New Position For The Inorganic Phosphate Binding Site.
Biochemistry V. 34 14975 1995
PubMed-ID: 7578111  |  Reference-DOI: 10.1021/BI00046A004
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    Chains: A, B, C, D
    EC Number: 1.2.1.12
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Gene: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    Expression System Plasmid: PET-3A
    Expression System Taxid: 562
    Gene: GLYCERALDEHYDE-3-PHOSPHATE
    Organism Scientific: LEISHMANIA MEXICANA
    Organism Taxid: 5665
    Synonym: GAPDH

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric/Biological Unit (2, 12)
No.NameCountTypeFull Name
1NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
2PO48Ligand/IonPHOSPHATE ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:165 , CYS A:166 , THR A:167 , HIS A:194 , THR A:226 , GLY A:227 , ALA A:228BINDING SITE FOR RESIDUE PO4 A 359
02AC2SOFTWARETHR A:197 , THR A:199 , ARG A:249 , NAD A:361BINDING SITE FOR RESIDUE PO4 A 360
03AC3SOFTWARESER B:165 , CYS B:166 , THR B:167 , THR B:226 , GLY B:227BINDING SITE FOR RESIDUE PO4 B 359
04AC4SOFTWARETHR B:197 , THR B:199 , ARG B:249 , NAD B:361BINDING SITE FOR RESIDUE PO4 B 360
05AC5SOFTWARESER C:165 , CYS C:166 , THR C:167 , THR C:226 , GLY C:227 , ALA C:228BINDING SITE FOR RESIDUE PO4 C 359
06AC6SOFTWARETHR C:197 , THR C:199 , ARG C:249 , NAD C:361BINDING SITE FOR RESIDUE PO4 C 360
07AC7SOFTWARESER D:165 , CYS D:166 , THR D:167 , THR D:226 , GLY D:227BINDING SITE FOR RESIDUE PO4 D 359
08AC8SOFTWARETHR D:197 , THR D:199 , ARG D:249 , NAD D:361BINDING SITE FOR RESIDUE PO4 D 360
09AC9SOFTWAREASN A:8 , GLY A:9 , GLY A:11 , ARG A:12 , ILE A:13 , VAL A:37 , ASP A:38 , MET A:39 , ALA A:90 , GLN A:91 , SER A:110 , THR A:111 , GLY A:112 , LEU A:113 , SER A:134 , ALA A:135 , CYS A:166 , ALA A:198 , ASN A:335 , PO4 A:360 , VAL B:206BINDING SITE FOR RESIDUE NAD A 361
10BC1SOFTWAREASN B:8 , GLY B:9 , PHE B:10 , GLY B:11 , ARG B:12 , ILE B:13 , VAL B:37 , ASP B:38 , GLN B:91 , SER B:110 , THR B:111 , GLY B:112 , LEU B:113 , SER B:134 , ALA B:135 , CYS B:166 , THR B:197 , ASN B:335 , TYR B:339 , PO4 B:360BINDING SITE FOR RESIDUE NAD B 361
11BC2SOFTWAREASN C:8 , GLY C:9 , GLY C:11 , ARG C:12 , ILE C:13 , VAL C:37 , ASP C:38 , ALA C:90 , GLN C:91 , GLY C:112 , LEU C:113 , SER C:134 , ALA C:135 , CYS C:166 , THR C:197 , ASN C:335 , TYR C:339 , PO4 C:360 , VAL D:206BINDING SITE FOR RESIDUE NAD C 361
12BC3SOFTWAREASN D:8 , GLY D:9 , PHE D:10 , GLY D:11 , ARG D:12 , ILE D:13 , ASP D:38 , ALA D:90 , SER D:110 , THR D:111 , LEU D:113 , SER D:134 , ALA D:135 , CYS D:166 , ASN D:335 , TYR D:339 , PO4 D:360BINDING SITE FOR RESIDUE NAD D 361

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1GYP)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1GYP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1GYP)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAPDHPS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.G3PG_LEIME165-172
 
 
 		  4A:164-171
B:164-171
C:164-171
D:164-171

(-) Exons   (0, 0)

(no "Exon" information available for 1GYP)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:358
 aligned with G3PG_LEIME | Q27890 from UniProtKB/Swiss-Prot  Length:361

    Alignment length:358
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351        
           G3PG_LEIME     2 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 359
               SCOP domains d1gypa1 A:1-165,A:335-358 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                           d1gypa2 A:166-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                       d1gypa1                  SCOP domains
               CATH domains -1gypA01 A:2-164,A:336-355 NAD(P)-binding Rossmann-like Domain                                                                                                      1gypA02 A:165-335 Dihydrodipicolinate Reductase; domain 2                                                                                                                  1gypA01             --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh.......eeeeeeee....hhhhhhhhh...........eeee..........eeee..eeeeeee....hhh..hhhh...eeee.......hhhhhhhhh....eeee................hhh.......eee...hhhhhhhhhhhhhhh....eeeeeeeeeee................hhh.......eee...hhhhhhhh.hhh...eeeeeeee.....eeeeeeeee.....hhhhhhhhhhhhh......eeee.....hhh.......eeeehhhhhh........eeeeeeee...hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gyp A   1 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350        


Chain B from PDB  Type:PROTEIN  Length:358
 aligned with G3PG_LEIME | Q27890 from UniProtKB/Swiss-Prot  Length:361

    Alignment length:358
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351        
           G3PG_LEIME     2 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 359
               SCOP domains d1gypb1 B:1-165,B:335-358 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                           d1gypb2 B:166-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                       d1gypb1                  SCOP domains
               CATH domains -1gypB01 B:2-164,B:336-355 NAD(P)-binding Rossmann-like Domain                                                                                                      1gypB02 B:165-335 Dihydrodipicolinate Reductase; domain 2                                                                                                                  1gypB01             --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh.......eeeeeeee....hhhhhhhhh...........eeee..........eeee..eeeeeee....hhh..hhhh...eeee.......hhhhhhhhhh...eeee................hhh.......eee...hhhhhhhhhhhhhhh......eeeeeeeee................hhh..hhh..eee..hhh.hhhhh.hhh...eeeeeeee.....eeeeeeee......hhhhhhhhhhhhh......eeee.....hhhh......eeeehhhhhh........eeeeeeee...hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gyp B   1 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350        


Chain C from PDB  Type:PROTEIN  Length:358
 aligned with G3PG_LEIME | Q27890 from UniProtKB/Swiss-Prot  Length:361

    Alignment length:358
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351        
           G3PG_LEIME     2 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 359
               SCOP domains d1gypc1 C:1-165,C:335-358 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                           d1gypc2 C:166-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                       d1gypc1                  SCOP domains
               CATH domains -1gypC01 C:2-164,C:336-355 NAD(P)-binding Rossmann-like Domain                                                                                                      1gypC02 C:165-335 Dihydrodipicolinate Reductase; domain 2                                                                                                                  1gypC01             --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh.......eeeeeeee....hhhhhhhhh...........eeee..........eeee...eeeeee....hhh..hhhh...eeee.......hhhhhhhhh....eeee................hhh.......eee...hhhhhhhhhhhhhhh....eeeeeeeeeee................hhh.......eeee.hhhhhhhhh.hhh...eeeeeeee.....eeeeeeeee.....hhhhhhhhhhhhh......eeee.....hhhh......eeeehhhhhh........eeeeeeee...hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gyp C   1 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350        


Chain D from PDB  Type:PROTEIN  Length:358
 aligned with G3PG_LEIME | Q27890 from UniProtKB/Swiss-Prot  Length:361

    Alignment length:358
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351        
           G3PG_LEIME     2 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 359
               SCOP domains d1gypd1 D:1-165,D:335-358 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                           d1gypd2 D:166-334 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                       d1gypd1                  SCOP domains
               CATH domains -1gypD01 D:2-164,D:336-355 NAD(P)-binding Rossmann-like Domain                                                                                                      1gypD02 D:165-335 Dihydrodipicolinate Reductase; domain 2                                                                                                                  1gypD01             --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhh.......eeeeeeee....hhhhhhhhh...........eeee..........eeee..eeeeeee....hhh..hhhh...eeee.......hhhhhhhhhh...eeee................hhh.......eee...hhhhhhhhhhhhhhh.......eeeeeeee................hhh.......eeee..hhhhhhhh.hhh...eeeeeeee.....eeeeeeee......hhhhhhhhhhhhh......eeee.....hhh.......eeeehhhhhh........eeeeeeee...hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPDH   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gyp D   1 APIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAASS 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1GYP)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (G3PG_LEIME | Q27890)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0004365    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity    Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0020015    glycosome    A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

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  1gyp
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  G3PG_LEIME | Q27890
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  1.2.1.12
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  G3PG_LEIME | Q27890
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        G3PG_LEIME | Q27890: 1a7k 1gyq 1i32 1i33

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