Chain A from PDB Type:PROTEIN Length:88
aligned with EATX_STRPY | Q57231 from UniProtKB/Swiss-Prot Length:90
Alignment length:88
12 22 32 42 52 62 72 82
EATX_STRPY 3 VTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLNKEKVA 90
SCOP domains d1gvna_ A: Plasmid maintenance system epsilon/zeta, antidote epsilon subunit SCOP domains
CATH domains 1gvnA00 A:3-90 [code=1.10.8.130, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------- Transcript
1gvn A 3 VTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLNKEKVA 90
12 22 32 42 52 62 72 82
Chain B from PDB Type:PROTEIN Length:273
aligned with ZTOX_STRPY | Q54944 from UniProtKB/Swiss-Prot Length:287
Alignment length:273
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
ZTOX_STRPY 2 ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLESLQPP 274
SCOP domains d1gvnb_ B: Plasmid maintenance system epsilon/zeta, toxin zeta subunit SCOP domains
CATH domains 1gvnB00 B:2-274 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhhhh........eeeeee......hhhhhhhhhhhh....eeehhhhhhhhh.hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh....eeee.....eeee.......hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gvn B 2 ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLESLQPP 274
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
Chain C from PDB Type:PROTEIN Length:86
aligned with EATX_STRPY | Q57231 from UniProtKB/Swiss-Prot Length:90
Alignment length:86
11 21 31 41 51 61 71 81
EATX_STRPY 2 AVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLNKE 87
SCOP domains d1gvnc_ C: Plasmid maintenance system epsilon/zeta, antidote epsilon subunit SCOP domains
CATH domains 1gvnC00 C:2-87 [code=1.10.8.130, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------- Transcript
1gvn C 2 AVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLNKE 87
11 21 31 41 51 61 71 81
Chain D from PDB Type:PROTEIN Length:271
aligned with ZTOX_STRPY | Q54944 from UniProtKB/Swiss-Prot Length:287
Alignment length:271
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
ZTOX_STRPY 2 ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLESLQ 272
SCOP domains d1gvnd_ D: Plasmid maintenance system epsilon/zeta, toxin zeta subunit SCOP domains
CATH domains 1gvnD00 D:2-272 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhh.hhhhhhhhhhhhhhhhhh........eeeeee......hhhhhhhhhhhh....eeehhhhhhhhh.hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh....eeee.....eeee.......hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gvn D 2 ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLESLQ 272
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
Description
