Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym.Unit - manually
(-)Asymmetric Unit
(-)Biological Unit 1
(-)Biological Unit 2
collapse expand < >
Image Asym.Unit - manually
Asym.Unit - manually  (Jmol Viewer)
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  GLUTATHIONE TRANSFERASE A1-1 IN UNLIGANDED FORM
 
Authors :  G. L'Hermite, I. Sinning, A. D. Cameron, T. A. Jones
Date :  09 Jun 95  (Deposition) - 15 Sep 95  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Transferase (Glutathione) (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. D. Cameron, I. Sinning, G. L'Hermite, B. Olin, P. G. Board, B. Mannervik, T. A. Jones
Structural Analysis Of Human Alpha-Class Glutathione Transferase A1-1 In The Apo-Form And In Complexes With Ethacrynic Acid And Its Glutathione Conjugate.
Structure V. 3 717 1995
PubMed-ID: 8591048  |  Reference-DOI: 10.1016/S0969-2126(01)00206-4
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLUTATHIONE TRANSFERASE A1-1
    ChainsA, B, C, D
    EC Number2.5.1.18
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPTACGST2
    Expression System StrainJM103
    Expression System Taxid562
    OrganLIVER
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1GSD)

(-) Sites  (0, 0)

(no "Site" information available for 1GSD)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1GSD)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Val A:55 -Pro A:56
2Val B:55 -Pro B:56
3Val C:55 -Pro C:56
4Val D:55 -Pro D:56

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (3, 12)

Asymmetric Unit (3, 12)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_033978T19IGSTA1_HUMANPolymorphism1051578A/B/C/DT19I
2UniProtVAR_049482P113QGSTA1_HUMANPolymorphism1051745A/B/C/DP113Q
3UniProtVAR_049483K117QGSTA1_HUMANPolymorphism1051757A/B/C/DK117Q

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (3, 6)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_033978T19IGSTA1_HUMANPolymorphism1051578A/BT19I
2UniProtVAR_049482P113QGSTA1_HUMANPolymorphism1051745A/BP113Q
3UniProtVAR_049483K117QGSTA1_HUMANPolymorphism1051757A/BK117Q

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (3, 6)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_033978T19IGSTA1_HUMANPolymorphism1051578C/DT19I
2UniProtVAR_049482P113QGSTA1_HUMANPolymorphism1051745C/DP113Q
3UniProtVAR_049483K117QGSTA1_HUMANPolymorphism1051757C/DK117Q

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GST_NTERPS50404 Soluble glutathione S-transferase N-terminal domain profile.GSTA1_HUMAN3-83
 
 
 
  4A:3-83
B:3-83
C:3-83
D:3-83
2GST_CTERPS50405 Soluble glutathione S-transferase C-terminal domain profile.GSTA1_HUMAN85-207
 
 
 
  4A:85-207
B:85-207
C:85-207
D:85-207
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GST_NTERPS50404 Soluble glutathione S-transferase N-terminal domain profile.GSTA1_HUMAN3-83
 
 
 
  2A:3-83
B:3-83
-
-
2GST_CTERPS50405 Soluble glutathione S-transferase C-terminal domain profile.GSTA1_HUMAN85-207
 
 
 
  2A:85-207
B:85-207
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GST_NTERPS50404 Soluble glutathione S-transferase N-terminal domain profile.GSTA1_HUMAN3-83
 
 
 
  2-
-
C:3-83
D:3-83
2GST_CTERPS50405 Soluble glutathione S-transferase C-terminal domain profile.GSTA1_HUMAN85-207
 
 
 
  2-
-
C:85-207
D:85-207

(-) Exons   (6, 24)

Asymmetric Unit (6, 24)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000003345751aENSE00002201258chr6:52668708-52668583126GSTA1_HUMAN-00--
1.2ENST000003345752ENSE00002162073chr6:52664095-52663979117GSTA1_HUMAN1-29294A:2-29
B:2-29
C:2-29
D:2-29
28
28
28
28
1.3ENST000003345753ENSE00002190926chr6:52662435-5266238452GSTA1_HUMAN30-47184A:30-47
B:30-47
C:30-47
D:30-47
18
18
18
18
1.4ENST000003345754ENSE00002186617chr6:52661112-52660980133GSTA1_HUMAN47-91454A:47-91
B:47-91
C:47-91
D:47-91
45
45
45
45
1.5bENST000003345755bENSE00002141355chr6:52659064-52658923142GSTA1_HUMAN91-138484A:91-138
B:91-138
C:91-138
D:91-138
48
48
48
48
1.6ENST000003345756ENSE00002159902chr6:52657785-52657654132GSTA1_HUMAN139-182444A:139-182
B:139-182
C:139-182
D:139-182
44
44
44
44
1.7ENST000003345757ENSE00002170665chr6:52656778-52656462317GSTA1_HUMAN183-222404A:183-209
B:183-209
C:183-209
D:183-209
27
27
27
27

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:208
 aligned with GSTA1_HUMAN | P08263 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
          GSTA1_HUMAN     2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
               SCOP domains d1gsda2 A:2-80 Class alpha GST                                                 d1gsda1 A:81-209 Class alpha GST                                                                                                  SCOP domains
               CATH domains 1gsdA01 A:2-81,A:191-209 Glutaredoxin                                           1gsdA02 A:82-190  [code=1.20.1050.10, no name defined]                                                       1gsdA01             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee.......hhhhhhhhhh....eeee...hhhhhhhhh..........eeee..eeee.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhh...........hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhh..hhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -----------------I---------------------------------------------------------------------------------------------Q---Q-------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -GST_NTER  PDB: A:3-83 UniProt: 3-83                                              -GST_CTER  PDB: A:85-207 UniProt: 85-207                                                                                    -- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: A:2-29       Exon 1.3          -------------------------------------------Exon 1.5b  PDB: A:91-138 UniProt: 91-138        Exon 1.6  PDB: A:139-182 UniProt: 139-182   Exon 1.7  PDB: A:183-209    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------Exon 1.4  PDB: A:47-91 UniProt: 47-91        ---------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gsd A   2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        

Chain B from PDB  Type:PROTEIN  Length:208
 aligned with GSTA1_HUMAN | P08263 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
          GSTA1_HUMAN     2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
               SCOP domains d1gsdb2 B:2-80 Class alpha GST                                                 d1gsdb1 B:81-209 Class alpha GST                                                                                                  SCOP domains
               CATH domains 1gsdB01 B:2-81,B:191-209 Glutaredoxin                                           1gsdB02 B:82-190  [code=1.20.1050.10, no name defined]                                                       1gsdB01             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee.......hhhhhhhhhh....eeee...hhhhhhhhh..........eeee..eeee.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhh...........hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhh..hhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -----------------I---------------------------------------------------------------------------------------------Q---Q-------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -GST_NTER  PDB: B:3-83 UniProt: 3-83                                              -GST_CTER  PDB: B:85-207 UniProt: 85-207                                                                                    -- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: B:2-29       Exon 1.3          -------------------------------------------Exon 1.5b  PDB: B:91-138 UniProt: 91-138        Exon 1.6  PDB: B:139-182 UniProt: 139-182   Exon 1.7  PDB: B:183-209    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------Exon 1.4  PDB: B:47-91 UniProt: 47-91        ---------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gsd B   2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        

Chain C from PDB  Type:PROTEIN  Length:208
 aligned with GSTA1_HUMAN | P08263 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
          GSTA1_HUMAN     2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
               SCOP domains d1gsdc2 C:2-80 Class alpha GST                                                 d1gsdc1 C:81-209 Class alpha GST                                                                                                  SCOP domains
               CATH domains 1gsdC01 C:2-81,C:191-209 Glutaredoxin                                           1gsdC02 C:82-190  [code=1.20.1050.10, no name defined]                                                       1gsdC01             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee.......hhhhhhhhhh....eeee...hhhhhhhhh..........eeee..eeee.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhh...........hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhh..hhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -----------------I---------------------------------------------------------------------------------------------Q---Q-------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -GST_NTER  PDB: C:3-83 UniProt: 3-83                                              -GST_CTER  PDB: C:85-207 UniProt: 85-207                                                                                    -- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: C:2-29       Exon 1.3          -------------------------------------------Exon 1.5b  PDB: C:91-138 UniProt: 91-138        Exon 1.6  PDB: C:139-182 UniProt: 139-182   Exon 1.7  PDB: C:183-209    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------Exon 1.4  PDB: C:47-91 UniProt: 47-91        ---------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gsd C   2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        

Chain D from PDB  Type:PROTEIN  Length:208
 aligned with GSTA1_HUMAN | P08263 from UniProtKB/Swiss-Prot  Length:222

    Alignment length:208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        
          GSTA1_HUMAN     2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
               SCOP domains d1gsdd2 D:2-80 Class alpha GST                                                 d1gsdd1 D:81-209 Class alpha GST                                                                                                  SCOP domains
               CATH domains 1gsdD01 D:2-81,D:191-209 Glutaredoxin                                           1gsdD02 D:82-190  [code=1.20.1050.10, no name defined]                                                       1gsdD01             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee.......hhhhhhhhhh....eeee...hhhhhhhhh..........eeee..eeee.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhh...........hhhhhhhhhhhhhhhh...hhhh.hhhhhhhhhhh..hhhhhhh........... Sec.struct. author
                 SAPs(SNPs) -----------------I---------------------------------------------------------------------------------------------Q---Q-------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -GST_NTER  PDB: D:3-83 UniProt: 3-83                                              -GST_CTER  PDB: D:85-207 UniProt: 85-207                                                                                    -- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: D:2-29       Exon 1.3          -------------------------------------------Exon 1.5b  PDB: D:91-138 UniProt: 91-138        Exon 1.6  PDB: D:139-182 UniProt: 139-182   Exon 1.7  PDB: D:183-209    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------Exon 1.4  PDB: D:47-91 UniProt: 47-91        ---------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1gsd D   2 AEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRKPPMD 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a1gsdA01A:2-81,A:191-209
1b1gsdB01B:2-81,B:191-209
1c1gsdC01C:2-81,C:191-209
1d1gsdD01D:2-81,D:191-209

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1GSD)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (GSTA1_HUMAN | P08263)
molecular function
    GO:0004364    glutathione transferase activity    Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0030855    epithelial cell differentiation    The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium.
    GO:1901687    glutathione derivative biosynthetic process    The chemical reactions and pathways resulting in the formation of glutathione derivative.
    GO:0006749    glutathione metabolic process    The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1gsd)
 
  Sites
(no "Sites" information available for 1gsd)
 
  Cis Peptide Bonds
    Val A:55 - Pro A:56   [ RasMol ]  
    Val B:55 - Pro B:56   [ RasMol ]  
    Val C:55 - Pro C:56   [ RasMol ]  
    Val D:55 - Pro D:56   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1gsd
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  GSTA1_HUMAN | P08263
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.5.1.18
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  GSTA1_HUMAN | P08263
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GSTA1_HUMAN | P082631gse 1gsf 1guh 1k3l 1k3o 1k3y 1lbk 1pkw 1pkz 1pl1 1pl2 1usb 1xwg 1ydk 2r3x 2r6k 3i69 3i6a 3ik9 3ktl 3l0h 3q74 3u6v 3zfb 3zfl 4hj2 5jcu 5lcz 5ld0

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1GSD)