Chain A from PDB Type:PROTEIN Length:167
aligned with SORCN_CRIGR | P05044 from UniProtKB/Swiss-Prot Length:198
Alignment length:167
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
SORCN_CRIGR 32 QDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
SCOP domains d1gjya_ A: Sorcin SCOP domains
CATH domains 1gjyA00 A:32-198 EF-hand CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhh......hhhhhhhhhhhhh........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh.....hhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------EF_HAND_2 -----EF_HAND_2 PDB: A:70-98 -EF_HAND_2 PDB: A:100-135 ---------------EF_HAND_2 ----------------------------- PROSITE (1)
PROSITE (2) ---------------------------------------------------EF_HAND_1 -----------------EF_HAND_1 ------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gjy A 32 MDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
Chain B from PDB Type:PROTEIN Length:167
aligned with SORCN_CRIGR | P05044 from UniProtKB/Swiss-Prot Length:198
Alignment length:167
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
SORCN_CRIGR 32 QDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
SCOP domains d1gjyb_ B: Sorcin SCOP domains
CATH domains 1gjyB00 B:32-198 EF-hand CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhh....eehhhhhhhhhhhhh........hhhhhhhhhhhhh......eehhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhh.....hhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------EF_HAND_2 -----EF_HAND_2 PDB: B:70-98 -EF_HAND_2 PDB: B:100-135 ---------------EF_HAND_2 ----------------------------- PROSITE (1)
PROSITE (2) ---------------------------------------------------EF_HAND_1 -----------------EF_HAND_1 ------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gjy B 32 MDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
Chain C from PDB Type:PROTEIN Length:167
aligned with SORCN_CRIGR | P05044 from UniProtKB/Swiss-Prot Length:198
Alignment length:167
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
SORCN_CRIGR 32 QDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
SCOP domains d1gjyc_ C: Sorcin SCOP domains
CATH domains 1gjyC00 C:32-198 EF-hand CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhh......hhhhhhhhhhhh.........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh.....hhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhh.......eeeeehhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------EF_HAND_2 -----EF_HAND_2 PDB: C:70-98 -EF_HAND_2 PDB: C:100-135 ---------------EF_HAND_2 ----------------------------- PROSITE (1)
PROSITE (2) ---------------------------------------------------EF_HAND_1 -----------------EF_HAND_1 ------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gjy C 32 MDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
Chain D from PDB Type:PROTEIN Length:167
aligned with SORCN_CRIGR | P05044 from UniProtKB/Swiss-Prot Length:198
Alignment length:167
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
SORCN_CRIGR 32 QDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
SCOP domains d1gjyd_ D: Sorcin SCOP domains
CATH domains 1gjyD00 D:32-198 EF-hand CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhh....eehhhhhhhhhhhhh........hhhhhhhhhhhhh......eehhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhhh....hhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------EF_HAND_2 -----EF_HAND_2 PDB: D:70-98 -EF_HAND_2 PDB: D:100-135 ---------------EF_HAND_2 ----------------------------- PROSITE (1)
PROSITE (2) ---------------------------------------------------EF_HAND_1 -----------------EF_HAND_1 ------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gjy D 32 MDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 198
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |