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(-) Description

Title :  STRUCTURE OF CYTOSOLIC PROTEIN OF UNKNOWN FUNCTION CODED BY GENE FROM NUSA/INFB REGION, A YLXR HOMOLOGUE
 
Authors :  J. Osipiuk, P. Gornicki, L. Maj, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  20 Oct 00  (Deposition) - 29 Aug 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Hypothetical, Nusa-Infb Operon, Streptococcus Pneumoniae, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, P. Gornicki, L. Maj, I. Dementieva, R. Laskowski, A. Joachimiak
Streptococcus Pneumonia Ylxr At 1. 35 A Shows A Putative New Fold.
Acta Crystallogr. , Sect. D V. 57 1747 2001
PubMed-ID: 11679764  |  Reference-DOI: 10.1107/S0907444901014019
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL CYTOSOLIC PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE
    Organism Taxid: 1313

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1SO43Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:50 , LYS A:61 , HOH A:205 , HOH A:234 , HOH A:262 , HOH A:324BINDING SITE FOR RESIDUE SO4 A 101
2AC2SOFTWAREARG A:9 , LYS A:10 , GLU A:16 , LYS A:61 , HOH A:208 , HOH A:232 , HOH A:262 , HOH A:289 , HOH A:310BINDING SITE FOR RESIDUE SO4 A 102
3AC3SOFTWAREARG A:9 , ARG A:25 , GLY A:46 , TYR A:48 , LYS A:60 , HOH A:219 , HOH A:238 , HOH A:239 , HOH A:251BINDING SITE FOR RESIDUE SO4 A 103

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1G2R)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1G2R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1G2R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1G2R)

(-) Exons   (0, 0)

(no "Exon" information available for 1G2R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:94
 aligned with A0A0H2UNW2_S | A0A0H2UNW2 from UniProtKB/TrEMBL  Length:97

    Alignment length:94
                                    13        23        33        43        53        63        73        83        93    
          A0A0H2UNW2_S    4 RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQVFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFSMEVEESFYDELIAYVDHKVKRRELGLE 97
               SCOP domains d1g2ra_ A: Hypothetical cytosolic protein SP0554                                               SCOP domains
               CATH domains 1g2rA00 A:4-97  [code=3.30.1230.10, no name defined]                                           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhh.eeeeee.....eeee.......eeeeee.hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                  1g2r A  4 RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQVFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFSMEVEESFYDELIAYVDHKVKRRELGLE 97
                                    13        23        33        43        53        63        73        83        93
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1G2R)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1G2R)

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