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(-) Description

Title :  THE HIGH RESOLUTION STRUCTURE OF A MOLYBDATE BINDING PROTEIN FROM SPOROMUSA OVATA
 
Authors :  U. G. Wagner, E. Stupperich, C. Kratky
Date :  07 Sep 00  (Deposition) - 06 Dec 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  G,H,I,J,K,L  (1x)
Keywords :  Molybdate, Tungstate, Molybdate Homeostasis, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  U. G. Wagner, E. Stupperich, C. Kratky
Structure Of The Molybdate/Tungstate Binding Protein Mop From Sporomusa Ovata.
Structure Fold. Des. V. 8 1127 2000
PubMed-ID: 11080635  |  Reference-DOI: 10.1016/S0969-2126(00)00525-6
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MOLYBDATE/TUNGSTATE BINDING PROTEIN
    ChainsA, B, C, D, E, F, G, H, I, J, K, L
    Organism ScientificSPOROMUSA OVATA
    Organism Taxid2378
    SynonymMOP

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit ABCDEFGHIJKL
Biological Unit 1 (1x)ABCDEF      
Biological Unit 2 (1x)      GHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 16)

Asymmetric Unit (1, 16)
No.NameCountTypeFull Name
1WO416Ligand/IonTUNGSTATE(VI)ION
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1WO48Ligand/IonTUNGSTATE(VI)ION
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1WO48Ligand/IonTUNGSTATE(VI)ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:64 , ILE B:38 , THR B:39 , SER B:42 , SER E:4 , GLY E:5 , ARG E:6 , LYS E:59 , ALA E:60BINDING SITE FOR RESIDUE WO4 E 401
02AC2SOFTWARESER B:4 , GLY B:5 , ARG B:6 , LYS B:59 , ALA B:60 , ILE E:38 , THR E:39 , SER E:42BINDING SITE FOR RESIDUE WO4 B 402
03AC3SOFTWAREILE C:38 , THR C:39 , SER C:42 , SER F:4 , GLY F:5 , ARG F:6 , LYS F:59 , ALA F:60BINDING SITE FOR RESIDUE WO4 F 403
04AC4SOFTWARESER C:4 , GLY C:5 , ARG C:6 , LYS C:59 , ALA C:60 , ILE F:38 , THR F:39 , SER F:42BINDING SITE FOR RESIDUE WO4 C 404
05AC5SOFTWARESER A:4 , GLY A:5 , ARG A:6 , LYS A:59 , ALA A:60 , ILE D:38 , THR D:39 , SER D:42BINDING SITE FOR RESIDUE WO4 A 405
06AC6SOFTWAREILE A:38 , THR A:39 , SER A:42 , SER D:4 , GLY D:5 , ARG D:6 , LYS D:59 , ALA D:60BINDING SITE FOR RESIDUE WO4 D 406
07AC7SOFTWAREILE H:38 , THR H:39 , SER H:42 , SER K:4 , GLY K:5 , ARG K:6 , LYS K:59 , ALA K:60BINDING SITE FOR RESIDUE WO4 K 407
08AC8SOFTWARESER H:4 , GLY H:5 , ARG H:6 , LYS H:59 , ALA H:60 , ILE K:38 , THR K:39 , SER K:42BINDING SITE FOR RESIDUE WO4 H 408
09AC9SOFTWAREILE I:38 , THR I:39 , SER I:42 , SER L:4 , GLY L:5 , ARG L:6 , LYS L:59 , ALA L:60BINDING SITE FOR RESIDUE WO4 L 409
10BC1SOFTWARESER I:4 , GLY I:5 , ARG I:6 , LYS I:59 , ALA I:60 , ILE L:38 , THR L:39 , SER L:42BINDING SITE FOR RESIDUE WO4 I 410
11BC2SOFTWARESER G:4 , GLY G:5 , ARG G:6 , LYS G:59 , ALA G:60 , ILE J:38 , THR J:39 , SER J:42BINDING SITE FOR RESIDUE WO4 G 411
12BC3SOFTWAREILE G:38 , THR G:39 , SER G:42 , GLU H:64 , SER J:4 , GLY J:5 , ARG J:6 , LYS J:59 , ALA J:60BINDING SITE FOR RESIDUE WO4 J 412
13BC4SOFTWARETHR B:20 , VAL B:21 , MET B:22 , THR D:20 , VAL D:21 , MET D:22 , THR F:20 , VAL F:21 , MET F:22BINDING SITE FOR RESIDUE WO4 B 413
14BC5SOFTWARETHR A:20 , VAL A:21 , MET A:22 , THR C:20 , VAL C:21 , MET C:22 , THR E:20 , VAL E:21 , MET E:22BINDING SITE FOR RESIDUE WO4 A 414
15BC6SOFTWARETHR H:20 , VAL H:21 , MET H:22 , THR J:20 , VAL J:21 , MET J:22 , GLY L:19 , THR L:20 , VAL L:21 , MET L:22BINDING SITE FOR RESIDUE WO4 L 415
16BC7SOFTWARETHR G:20 , VAL G:21 , MET G:22 , THR I:20 , VAL I:21 , MET I:22 , THR K:20 , VAL K:21 , MET K:22BINDING SITE FOR RESIDUE WO4 G 416

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1FR3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1FR3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1FR3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1FR3)

(-) Exons   (0, 0)

(no "Exon" information available for 1FR3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3a_ A: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3A00 A:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 A  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain B from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3b_ B: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3B00 B:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 B  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain C from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3c_ C: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3C00 C:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 C  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain D from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3d_ D: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3D00 D:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 D  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain E from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3e_ E: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3E00 E:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 E  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain F from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3f_ F: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3F00 F:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 F  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain G from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3g_ G: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3G00 G:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 G  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain H from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3h_ H: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3H00 H:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 H  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain I from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3i_ I: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3I00 I:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 I  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain J from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3j_ J: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3J00 J:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 J  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain K from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3k_ K: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3K00 K:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 K  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

Chain L from PDB  Type:PROTEIN  Length:67
 aligned with Q7SIF7_9FIRM | Q7SIF7 from UniProtKB/TrEMBL  Length:67

    Alignment length:67
                                    10        20        30        40        50        60       
          Q7SIF7_9FIRM    1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
               SCOP domains d1fr3l_ L: Molybdate/tungstate binding protein MOP                  SCOP domains
               CATH domains 1fr3L00 L:1-67  [code=2.40.50.100, no name defined]                 CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee...eeeeeeee..eeeeeeeehhhhhhhh.....eeeeeehhhhheee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  1fr3 L  1 MKISGRNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK 67
                                    10        20        30        40        50        60       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 12)

Asymmetric Unit

(-) CATH Domains  (1, 12)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1FR3)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (Q7SIF7_9FIRM | Q7SIF7)
molecular function
    GO:0030151    molybdenum ion binding    Interacting selectively and non-covalently with molybdenum (Mo) ions.
biological process
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1FR3)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1FR3)