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(-) Description

Title :  WINGED BEAN ACIDIC LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE (MONOCLINIC FORM)
 
Authors :  N. Manoj, V. R. Srinivas, A. Surolia, M. Vijayan, K. Suguna
Date :  14 Jul 00  (Deposition) - 14 Jul 01  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Legume Lectin, Glycosylated Protein, H-Antigenic Specificity, Agglutinin, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Manoj, V. R. Srinivas, A. Surolia, M. Vijayan, K. Suguna
Carbohydrate Specificity And Salt-Bridge Mediated Conformational Change In Acidic Winged Bean Agglutinin.
J. Mol. Biol. V. 302 1129 2000
PubMed-ID: 11183779  |  Reference-DOI: 10.1006/JMBI.2000.4111
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ACIDIC LECTIN
    Chains: A, B, C, D, E, F, G, H
    Organ: LEGUMINOUS SEEDS
    Organism Common: WINGED BEAN
    Organism Scientific: PSOPHOCARPUS TETRAGONOLOBUS
    Organism Taxid: 3891
    Other Details: WINGED BEAN, PSOPHOCARPUS TETRAGONOLOBUS, SEEDS
    Synonym: ACIDIC AGGLUTININ

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 36)

Asymmetric Unit (4, 36)
No.NameCountTypeFull Name
1AMG8Ligand/IonALPHA-METHYL-D-GALACTOSIDE
2CA8Ligand/IonCALCIUM ION
3MN8Ligand/IonMANGANESE (II) ION
4NAG12Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
1AMG2Ligand/IonALPHA-METHYL-D-GALACTOSIDE
2CA-1Ligand/IonCALCIUM ION
3MN-1Ligand/IonMANGANESE (II) ION
4NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (2, 6)
No.NameCountTypeFull Name
1AMG2Ligand/IonALPHA-METHYL-D-GALACTOSIDE
2CA-1Ligand/IonCALCIUM ION
3MN-1Ligand/IonMANGANESE (II) ION
4NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 3 (2, 6)
No.NameCountTypeFull Name
1AMG2Ligand/IonALPHA-METHYL-D-GALACTOSIDE
2CA-1Ligand/IonCALCIUM ION
3MN-1Ligand/IonMANGANESE (II) ION
4NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1AMG2Ligand/IonALPHA-METHYL-D-GALACTOSIDE
2CA-1Ligand/IonCALCIUM ION
3MN-1Ligand/IonMANGANESE (II) ION
4NAG-1Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (36, 36)

Asymmetric Unit (36, 36)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:76 , GLY A:158 , VAL A:160 , GLU A:224 , NAG A:503BINDING SITE FOR RESIDUE NAG A 501
02AC2SOFTWARENAG A:501BINDING SITE FOR RESIDUE NAG A 503
03AC3SOFTWAREASN B:76 , THR B:222 , GLU B:224 , NAG B:503 , HOH B:517BINDING SITE FOR RESIDUE NAG B 501
04AC4SOFTWARENAG B:501 , ASP F:8BINDING SITE FOR RESIDUE NAG B 503
05AC5SOFTWAREASN C:76 , THR C:78 , GLY C:158 , VAL C:160 , GLU C:224 , NAG C:503BINDING SITE FOR RESIDUE NAG C 501
06AC6SOFTWARENAG C:501BINDING SITE FOR RESIDUE NAG C 503
07AC7SOFTWAREASN D:76 , GLY D:158 , GLU D:224 , NAG D:503BINDING SITE FOR RESIDUE NAG D 501
08AC8SOFTWARENAG D:501BINDING SITE FOR RESIDUE NAG D 503
09AC9SOFTWAREASN E:76 , THR E:78 , GLY E:158 , THR E:222 , GLU E:224 , NAG E:503BINDING SITE FOR RESIDUE NAG E 501
10BC1SOFTWARETHR E:78 , PRO E:80 , NAG E:501BINDING SITE FOR RESIDUE NAG E 503
11BC2SOFTWAREASN F:76 , GLY F:158 , VAL F:160 , GLU F:224 , NAG F:503BINDING SITE FOR RESIDUE NAG F 501
12BC3SOFTWARENAG F:501BINDING SITE FOR RESIDUE NAG F 503
13BC4SOFTWAREASP A:88 , GLY A:106 , PHE A:127 , ASN A:129 , GLY A:214 , TYR A:215 , GLN A:216BINDING SITE FOR RESIDUE AMG A 400
14BC5SOFTWAREASP B:88 , GLY B:106 , PHE B:127 , ASN B:129 , GLY B:214 , TYR B:215 , GLN B:216BINDING SITE FOR RESIDUE AMG B 401
15BC6SOFTWAREASP C:88 , GLY C:106 , PHE C:127 , ASN C:129 , GLY C:214 , TYR C:215 , GLN C:216BINDING SITE FOR RESIDUE AMG C 402
16BC7SOFTWAREASP D:88 , GLY D:106 , PHE D:127 , ASN D:129 , GLY D:214 , TYR D:215BINDING SITE FOR RESIDUE AMG D 403
17BC8SOFTWAREASP E:88 , GLY E:106 , PHE E:127 , ASN E:129 , GLY E:214 , TYR E:215 , GLN E:216BINDING SITE FOR RESIDUE AMG E 404
18BC9SOFTWAREASP F:88 , GLY F:106 , PHE F:127 , ASN F:129 , GLY F:214 , TYR F:215BINDING SITE FOR RESIDUE AMG F 405
19CC1SOFTWAREASP G:88 , GLY G:106 , PHE G:127 , ASN G:129 , GLY G:214 , TYR G:215BINDING SITE FOR RESIDUE AMG G 406
20CC2SOFTWAREASP H:88 , GLY H:106 , PHE H:127 , ASN H:129 , GLY H:214 , TYR H:215BINDING SITE FOR RESIDUE AMG H 407
21CC3SOFTWAREGLU A:123 , ASP A:125 , ASP A:132 , HIS A:137 , HOH A:506 , HOH A:507BINDING SITE FOR RESIDUE MN A 300
22CC4SOFTWAREASP A:125 , PHE A:127 , ASN A:129 , ASP A:132 , HOH A:508 , HOH A:509BINDING SITE FOR RESIDUE CA A 303
23CC5SOFTWAREGLU B:123 , ASP B:125 , ASP B:132 , HIS B:137 , SER B:147 , HOH B:505 , HOH B:514BINDING SITE FOR RESIDUE MN B 300
24CC6SOFTWAREASP B:125 , PHE B:127 , ASN B:129 , ASP B:132 , HOH B:506 , HOH B:520BINDING SITE FOR RESIDUE CA B 303
25CC7SOFTWAREGLU C:123 , ASP C:125 , ASP C:132 , HIS C:137 , HOH C:505 , HOH C:506BINDING SITE FOR RESIDUE MN C 300
26CC8SOFTWAREASP C:125 , PHE C:127 , ASN C:129 , ASP C:132 , HOH C:507BINDING SITE FOR RESIDUE CA C 303
27CC9SOFTWAREGLU D:123 , ASP D:125 , ASP D:132 , HIS D:137 , HOH D:505 , HOH D:506BINDING SITE FOR RESIDUE MN D 300
28DC1SOFTWAREASP D:125 , PHE D:127 , ASN D:129 , ASP D:132 , HOH D:507 , HOH D:511BINDING SITE FOR RESIDUE CA D 303
29DC2SOFTWAREGLU E:123 , ASP E:125 , ASP E:132 , HIS E:137 , HOH E:504 , HOH E:506BINDING SITE FOR RESIDUE MN E 300
30DC3SOFTWAREASP E:125 , PHE E:127 , ASN E:129 , ASP E:132 , HOH E:507 , HOH E:513BINDING SITE FOR RESIDUE CA E 303
31DC4SOFTWAREGLU F:123 , ASP F:125 , ASP F:132 , HIS F:137 , HOH F:505 , HOH F:506BINDING SITE FOR RESIDUE MN F 300
32DC5SOFTWAREASP F:125 , PHE F:127 , ASN F:129 , ASP F:132 , HOH F:507 , HOH F:517BINDING SITE FOR RESIDUE CA F 303
33DC6SOFTWAREGLU G:123 , ASP G:125 , ASP G:132 , HIS G:137 , HOH G:408 , HOH G:412BINDING SITE FOR RESIDUE MN G 300
34DC7SOFTWAREASP G:125 , PHE G:127 , ASN G:129 , ASP G:132 , HOH G:409 , HOH G:410BINDING SITE FOR RESIDUE CA G 303
35DC8SOFTWAREGLU H:123 , ASP H:125 , ASP H:132 , HIS H:137 , SER H:147 , HOH H:409 , HOH H:410BINDING SITE FOR RESIDUE MN H 300
36DC9SOFTWAREASP H:125 , PHE H:127 , ASN H:129 , ASP H:132 , HOH H:411 , HOH H:413BINDING SITE FOR RESIDUE CA H 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1FAY)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Tyr A:83 -Pro A:84
2Ala A:87 -Asp A:88
3Val A:135 -Pro A:136
4Tyr B:83 -Pro B:84
5Ala B:87 -Asp B:88
6Val B:135 -Pro B:136
7Tyr C:83 -Pro C:84
8Ala C:87 -Asp C:88
9Val C:135 -Pro C:136
10Tyr D:83 -Pro D:84
11Ala D:87 -Asp D:88
12Val D:135 -Pro D:136
13Tyr E:83 -Pro E:84
14Ala E:87 -Asp E:88
15Val E:135 -Pro E:136
16Tyr F:83 -Pro F:84
17Ala F:87 -Asp F:88
18Val F:135 -Pro F:136
19Tyr G:83 -Pro G:84
20Ala G:87 -Asp G:88
21Val G:135 -Pro G:136
22Tyr H:83 -Pro H:84
23Ala H:87 -Asp H:88
24Val H:135 -Pro H:136

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1FAY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1FAY)

(-) Exons   (0, 0)

(no "Exon" information available for 1FAY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1faya_ A: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayA00 A:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...........eee..ee.....eeee..ee..ee....eeeee....ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeee.....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay A   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1fayb_ B: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayB00 B:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.........eeeee..eee...eeeee..ee..ee....eeeeee...ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeee.....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay B   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1fayc_ C: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayC00 C:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.........eeeee..ee.....eeee............eeeeee...ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay C   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain D from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1fayd_ D: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayD00 D:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...........eee..ee.....eeee............eeeee....ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay D   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain E from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1faye_ E: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayE00 E:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.........eeeee..ee.....eeee............eeeeee...ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay E   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain F from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1fayf_ F: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayF00 F:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.........eeeee..ee.....eeee..ee..ee....eeeeee...ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay F   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain G from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1fayg_ G: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayG00 G:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee............ee..ee.....eeee............eeeee....ee...........eeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeee.....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay G   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114                                                                                                                          


Chain H from PDB  Type:PROTEIN  Length:236
 aligned with Q9SM56_PSOTE | Q9SM56 from UniProtKB/TrEMBL  Length:240

    Alignment length:238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230        
         Q9SM56_PSOTE     1 ETQSFNFDHFEENSKELNLQRQASIKSSGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPGGEDGGNLGVFKPSNPEGDNALAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 238
               SCOP domains d1fayh_ H: Legume lectin                                                                                                                                                                                                                       SCOP domains
               CATH domains 1fayH00 H:1-236  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.........eeeee..ee.....eeee..ee..ee....eeeeee...ee..........eeeeeeeee...........eeeeeeee........hhhhh.....--......eeeeee...........eeeeee.......eee.......eeeeeeee.....eeeeeeee....eeeeeeee.hhhhhh....eeeeeeeeee.........eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1fay H   1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKP--PEGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQE 236
                                    10        20        30        40        50        60        70        80        90       100       110  |  | 118       128       138       148       158       168       178       188       198       208       218       228        
                                                                                                                                          113  |                                                                                                                          
                                                                                                                                             114
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 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 8)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1FAY)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (Q9SM56_PSOTE | Q9SM56)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9SM56_PSOTE | Q9SM56: 1f9k

(-) Related Entries Specified in the PDB File

1f9k 1F9K CONTAINS THE SAME PROTEIN IN A DIFFERENT CRYSTAL FORM