Chain A from PDB Type:PROTEIN Length:297
aligned with SPI2_CWPXB | P07385 from UniProtKB/Swiss-Prot Length:341
Alignment length:305
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300
SPI2_CWPXB 1 MDIFREIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADKNKDDISFKSMNKVYGRYSAVFKDSFLRKIGDNFQTVDFTDCRTVDAINKCVDIFTEGKINPLLDEPLSPDTCLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHASVKESFGNFSIIELPYVGDTSMVVILPDNIDGLESIEQNLTDTNFKKWCDSMDAMFIDVHIPKFKVTGSYNLVDALVKLGLTEVFGSTGDYSNMCNSDVSVDAMIHKTYIDVNEEYTEAAAATCALVADCA 305
SCOP domains d1f0c.1 A:,B: Viral serpin crmA (cytokine respo nse modifier protein) SCOP domains
CATH domains ----------------1f0cA01 A:51-189,A:294-337,A:34 8-358 Antithrombin, subunit I, domain 2 1f0cA02 A:190-293,A:338-347 Alpha-1-antitrypsin, domain 1 1f0cA01 A:51-189,A:294-337,A:348-358 1f0cA02 1f0cA01 - CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhh.....eeehhhhhhhhhhhhhhhh.hhhhhhhhh...--------...eeeeeeeeee.....hhhhhhhhh..eeee....hhhhhhhhhhhhhhh...............eeeeeeeeeeeeee.....hhhhheeeeeeee..eeeeeeeeeeeeeeeeeeee......eeeeeee....eeeeeeee....hhhhhhh..hhhhhhhhhhh.eeeeeeeeee.eeeeeeeehhhhhhhh....................eeeeeeeeeeeee...eeeeeeeeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1f0c A 35 MDIFREIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVE--------DISFKSMNKVYGRYSAVFKDSFLRKIGDNFQTVDFTDCRTVDAINKCVDIFTEGKINPLLDEPLSPDTCLLAISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYGEAFNHASVKESFGNFSIIELPYVGDTSMVVILPDNIDGLESIEQNLTDTNFKKWCDSMDAMFIDVHIPKFKVTGSYNLVDALVKLGLTEVFGSTGDYSNMCNSDVSVDAMIHKTYIDVNEEYTEAAAATCALVADCA 359
44 54 64 74 | - ||113 123 133 || 147|| 158 168 179|| 187 197 207 217 226 235A| 244 254 | 263 273 283 293 303 313 324 334 344 354
81 103| 136| 148| 176| || 224A 235A| 257A 322|
110 141 150 178 || 235B 324
179A|
179B
Chain B from PDB Type:PROTEIN Length:36
aligned with SPI2_CWPXB | P07385 from UniProtKB/Swiss-Prot Length:341
Alignment length:36
315 325 335
SPI2_CWPXB 306 STVTNEFCADHPFIYVIRHVDGKILFVGRYCSPTTN 341
SCOP domains d1f0c.1 A:,B: SCOP domains
CATH domains ------------------------------------ CATH domains
Pfam domains ------------------------------------ Pfam domains
Sec.struct. author .....eee....eeeeeee....eeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------ SAPs(SNPs)
PROSITE ------SERPIN ------------------- PROSITE
Transcript ------------------------------------ Transcript
1f0c B 359A STVTNEFCADHPFIYVIRHVDGKILFVGRYCSPTTN 394
|| 367 377|| 388
359A| 378|
359B 380
Legend: |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |