Chain A from PDB Type:PROTEIN Length:224
aligned with O73568_COWPX | O73568 from UniProtKB/TrEMBL Length:255
Alignment length:236
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249
O73568_COWPX 20 SLQQSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEITESESDPDPEVESSSDSTSVEDVDPPTTYYSIIGGGLRMNFGFTKCPQIKSISESADGNTVNARLSSVSPGQGKDSPAITHEEALAMIKDCEVSIDIRCSEEEKDSDIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEFSVRIGDMCKESSELEVKDGFKYVDGSASEGATDDTSLIDSTKLKACV 255
SCOP domains d1c q3a_ A: Soluble secreted chemokine inhibitor, VCCI SCOP domains
CATH domains 1cq 3A00 A:1-224 Viral Chemokine Inhibitor; Chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...-..........ee.eeeeeeeeeee............eeeeee......eeeee..-----------.eeeeeeee..eeeeeeee......eeeeeee..eeeeeee............eehhhhhhhhhhheeeeeeee........................ee...eeeeeee...eeeeeeeeeeee....hhhh.eeeeeeee..eee..........hhhhhee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1cq3 A 1 SFS-SSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGD-----------PTTYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSMIKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVRIGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV 224
| | 9 19 29 39 49 |- -| 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218
3 4 58 59
Chain A from PDB Type:PROTEIN Length:224
aligned with Q85307_COWPX | Q85307 from UniProtKB/TrEMBL Length:246
Alignment length:224
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242
Q85307_COWPX 23 SFSSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGDPTTYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSMIKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVRIGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV 246
SCOP domains d1cq3a_ A: Soluble secreted chemokine inhibitor, VCCI SCOP domains
CATH domains 1cq3A00 A:1-224 Viral Chemokine Inhibitor; Chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............ee.eeeeeeeeeee............eeeeee......eeeee...eeeeeeee..eeeeeeee......eeeeeee..eeeeeee............eehhhhhhhhhhheeeeeeee........................ee...eeeeeee...eeeeeeeeeeee....hhhh.eeeeeeee..eee..........hhhhhee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1cq3 A 1 SFSSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGDPTTYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSMIKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVRIGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV 224
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
Chain B from PDB Type:PROTEIN Length:224
aligned with O73568_COWPX | O73568 from UniProtKB/TrEMBL Length:255
Alignment length:236
29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249
O73568_COWPX 20 SLQQSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEITESESDPDPEVESSSDSTSVEDVDPPTTYYSIIGGGLRMNFGFTKCPQIKSISESADGNTVNARLSSVSPGQGKDSPAITHEEALAMIKDCEVSIDIRCSEEEKDSDIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEFSVRIGDMCKESSELEVKDGFKYVDGSASEGATDDTSLIDSTKLKACV 255
SCOP domains d1c q3b_ B: Soluble secreted chemokine inhibitor, VCCI SCOP domains
CATH domains 1cq 3B00 B:1-224 Viral Chemokine Inhibitor; Chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...-..........ee.eeeeeeeeeee............eeeeee......eeeee..-----------.eeeeeeee..eeeeeeee......eeeeeee..eeeeeee............eehhhhhhhhhhheeeeeeee.............................eeeeeee...eeeeeeeeeeee.........eeeeeeee..eee..........hhhhhee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1cq3 B 1 SFS-SSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGD-----------PTTYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSMIKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVRIGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV 224
| | 9 19 29 39 49 |- -| 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218
3 4 58 59
Chain B from PDB Type:PROTEIN Length:224
aligned with Q85307_COWPX | Q85307 from UniProtKB/TrEMBL Length:246
Alignment length:224
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242
Q85307_COWPX 23 SFSSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGDPTTYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSMIKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVRIGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV 246
SCOP domains d1cq3b_ B: Soluble secreted chemokine inhibitor, VCCI SCOP domains
CATH domains 1cq3B00 B:1-224 Viral Chemokine Inhibitor; Chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............ee.eeeeeeeeeee............eeeeee......eeeee...eeeeeeee..eeeeeeee......eeeeeee..eeeeeee............eehhhhhhhhhhheeeeeeee.............................eeeeeee...eeeeeeeeeeee.........eeeeeeee..eee..........hhhhhee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1cq3 B 1 SFSSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGDPTTYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSMIKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVRIGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV 224
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |