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(-) Description

Title :  SOLUTION STRUCTURE OF AN EGF MODULE PAIR FROM THE PLASMODIUM FALCIPARUM MEROZOITE SURFACE PROTEIN 1
 
Authors :  W. D. Morgan, B. Birdsall, T. A. Frenkiel, M. G. Gradwell, P. A. Burghaus, S. E. H. Syed, C. Uthaipibull, A. A. Holder, J. Feeney
Date :  08 Mar 99  (Deposition) - 28 May 99  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (32x)
Keywords :  Egf-Like Domain, Extracellular, Modular Protein, Surface Antigen, Malaria Vaccine Component, Surface Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. D. Morgan, B. Birdsall, T. A. Frenkiel, M. G. Gradwell, P. A. Burghaus, S. E. Syed, C. Uthaipibull, A. A. Holder, J. Feeney
Solution Structure Of An Egf Module Pair From The Plasmodium Falciparum Merozoite Surface Protein 1.
J. Mol. Biol. V. 289 113 1999
PubMed-ID: 10339410  |  Reference-DOI: 10.1006/JMBI.1999.2753
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN (MEROZOITE SURFACE PROTEIN 1)
    Cell: MEROZOITE STAGE
    Cellular Location: SECRETED
    Chains: A
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Plasmid: PPIC9K
    Expression System Strain: SMD1168
    Expression System Taxid: 4922
    Expression System Vector Type: PLASMID
    Fragment: C-TERMINAL FRAGMENT
    Gene: MSP-1
    Organism Common: MALARIA PARASITE P. FALCIPARUM
    Organism Scientific: PLASMODIUM FALCIPARUM
    Organism Taxid: 5833
    Other Details: GPI-ANCHOR
    Strain: SMD1168
    Synonym: MEROZOITE SURFACE ANTIGEN 1, MAJOR BLOOD-STAGE SURFACE ANTIGEN

 Structural Features

(-) Chains, Units

  
NMR Structure (32x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1CEJ)

(-) Sites  (0, 0)

(no "Site" information available for 1CEJ)

(-) SS Bonds  (6, 6)

NMR Structure
No.Residues
1A:7 -A:18
2A:12 -A:28
3A:30 -A:41
4A:49 -A:62
5A:56 -A:76
6A:78 -A:92

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1CEJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1CEJ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:96
 aligned with MSP1_PLAFW | P04933 from UniProtKB/Swiss-Prot  Length:1639

    Alignment length:96
                                  1535      1545      1555      1565      1575      1585      1595      1605      1615      
          MSP1_PLAFW   1526 NISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFCSSSN 1621
               SCOP domains d1ceja1 A:1-45                               d1ceja2 A:46-96 Merozoite surface protein 1 (MSP-1) SCOP domains
               CATH domains 1cejA01 A:1-44 Laminin                      1cejA02 A:45-96 Laminin                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ................eee.......eee.....eee..eee..................eee...........eee................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                1cej A    1 NISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFCSSSN   96
                                    10        20        30        40        50        60        70        80        90
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

NMR Structure
(-)
Class: Small proteins (3458)

(-) CATH Domains  (1, 2)

NMR Structure
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1CEJ)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)
Chain A   (MSP1_PLAFW | P04933)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0031225    anchored component of membrane    The component of a membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MSP1_PLAFW | P04933: 2flg 2mu7 2mue

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