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(-) Description

Title :  BROMOPEROXIDASE A2
 
Authors :  H. J. Hecht, H. Sobek, T. Haag, O. Pfeifer, K. H. Van Pee
Date :  01 Jun 96  (Deposition) - 07 Dec 96  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (3x)
Biol. Unit 2:  B  (3x)
Keywords :  Antibiotic Biosynthesis, Oxidoreductase, Peroxidase, Alpha/Beta Hydrolase Fold, Haloperoxidase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. J. Hecht, H. Sobek, T. Haag, O. Pfeifer, K. H. Van Pee
The Metal-Ion-Free Oxidoreductase From Streptomyces Aureofaciens Has An Alpha/Beta Hydrolase Fold.
Nat. Struct. Biol. V. 1 532 1994
PubMed-ID: 7664081  |  Reference-DOI: 10.1038/NSB0894-532
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BROMOPEROXIDASE A2
    Atcc: 10762
    Chains: A, B
    EC Number: 1.11.1.-
    Engineered: YES
    Expression System: STREPTOMYCES LIVIDANS
    Expression System Gene: BPOA2
    Expression System Plasmid: PIJ486
    Expression System Strain: TK64
    Expression System Taxid: 1916
    Expression System Vector Type: BACTERIAL
    Gene: BPOA2
    Organism Scientific: STREPTOMYCES AUREOFACIENS
    Organism Taxid: 1894
    Synonym: HALOPEROXIDASE A2, CHLOROPEROXIDASE A2

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (3x): A 
Biological Unit 2 (3x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1BRO)

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1ACTUNKNOWNSER A:98 , ASP A:228 , HIS A:257CATALYTIC TRIAD.
2BCTUNKNOWNSER B:98 , ASP B:228 , HIS B:257CATALYTIC TRIAD.

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1BRO)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Phe A:32 -Pro A:33
2Glu A:126 -Pro A:127
3Phe B:32 -Pro B:33
4Glu B:126 -Pro B:127

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1BRO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1BRO)

(-) Exons   (0, 0)

(no "Exon" information available for 1BRO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:277
 aligned with BPOA2_STRAU | P29715 from UniProtKB/Swiss-Prot  Length:278

    Alignment length:277
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       
          BPOA2_STRAU     2 PFITVGQENSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 278
               SCOP domains d1broa_ A: Bromoperoxidase A2                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 1broA00 A:1-277  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee..eeeeeeeeee....eeeee......hhhhhhhhhhhhh...eeeee................hhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhh....eeeeeee...................hhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhh......hhhhhhhhhhhh...hhhhhhhhhh........hhh...eeeeeee...........hhhhhhh....eeeee......hhhh.hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bro A   1 PFITVGQENSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       


Chain B from PDB  Type:PROTEIN  Length:277
 aligned with BPOA2_STRAU | P29715 from UniProtKB/Swiss-Prot  Length:278

    Alignment length:277
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       
          BPOA2_STRAU     2 PFITVGQENSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 278
               SCOP domains d1brob_ B: Bromoperoxidase A2                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 1broB00 B:1-277  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee..eeeeeeeeee....eeeee......hhhhhhhhhhhhh...eeeee................hhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhh....eeeeeee...................hhhhhhhhhhhhh.hhhhhhhhhhhh..hhhh......hhhhhhhhhhhh...hhhhhhhhhh.....hhhhhh...eeeeeee...........hhhhhhh....eeeee......hhhh.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1bro B   1 PFITVGQENSTSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1BRO)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (BPOA2_STRAU | P29715)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004601    peroxidase activity    Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
biological process
    GO:0017000    antibiotic biosynthetic process    The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.
    GO:0098869    cellular oxidant detoxification    Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BPOA2_STRAU | P29715: 1brt 3vdx 4d9j 4iq4 4itv 4ivj 4qes 4qf0 4qff

(-) Related Entries Specified in the PDB File

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