Chain A from PDB Type:PROTEIN Length:278
aligned with TYSY1_BACPZ | E0TVT6 from UniProtKB/Swiss-Prot Length:279
Alignment length:278
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
TYSY1_BACPZ 2 TQFDKQYNSIIKDIMNNGISDEEFNVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 279
SCOP domains d1bkpa_ A: Thymidylate synthase SCOP domains
CATH domains 1bkpA00 A:2-279 Thymidylate Synthase, chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhh.....................eeeee.eeeee..............hhhhhhhhhhhh......hhhhhhh.....hhh..........hhhhhh...eee..eee.hhhhhhhhhhh.......eee......hhh......eeeeeeeee..eeeeeeee.eee....hhhhhhhhhhhhhhhhhhh......eeeee.eeeeehhhhhhhhhhhh.......eeee......hhh..hhheeee.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------K-----------------------------N------------------------------------S---------------Q------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------THYMIDYLATE_SYNTHASE -------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bkp A 2 TQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
Chain A from PDB Type:PROTEIN Length:278
aligned with TYSY1_BACSU | P0CI79 from UniProtKB/Swiss-Prot Length:279
Alignment length:278
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
TYSY1_BACSU 2 TQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279
SCOP domains d1bkpa_ A: Thymidylate synthase SCOP domains
CATH domains 1bkpA00 A:2-279 Thymidylate Synthase, chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhh.....................eeeee.eeeee..............hhhhhhhhhhhh......hhhhhhh.....hhh..........hhhhhh...eee..eee.hhhhhhhhhhh.......eee......hhh......eeeeeeeee..eeeeeeee.eee....hhhhhhhhhhhhhhhhhhh......eeeee.eeeeehhhhhhhhhhhh.......eeee......hhh..hhheeee.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------K-----------------------------N------------------------------------S---------------Q------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------THYMIDYLATE_SYNTHASE -------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bkp A 2 TQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
Chain B from PDB Type:PROTEIN Length:278
aligned with TYSY1_BACPZ | E0TVT6 from UniProtKB/Swiss-Prot Length:279
Alignment length:278
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
TYSY1_BACPZ 2 TQFDKQYNSIIKDIMNNGISDEEFNVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVTELNKMGVHIWDQWKQEDGTIGHAYGFQLGKKNRNLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDSMALTPCVYETQWYVKQGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLFNYKHGDKLLFEVAV 279
SCOP domains d1bkpb_ B: Thymidylate synthase SCOP domains
CATH domains 1bkpB00 B:2-279 Thymidylate Synthase, chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhh.....................eeeee.eeeee..............hhhhhhhhhhhh......hhhhhhh.....hhh..........hhhhhh...eee..eee.hhhhhhhhhhh.......eee......hhh......eeeeeeeee..eeeeeeee.eee....hhhhhhhhhhhhhhhhhhh......eeeee.eeeeehhhhhhhhhhhh.......eeee......hhh..hhheeee.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------K-----------------------------N------------------------------------S---------------Q------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------THYMIDYLATE_SYNTHASE -------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bkp B 2 TQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
Chain B from PDB Type:PROTEIN Length:278
aligned with TYSY1_BACSU | P0CI79 from UniProtKB/Swiss-Prot Length:279
Alignment length:278
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
TYSY1_BACSU 2 TQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279
SCOP domains d1bkpb_ B: Thymidylate synthase SCOP domains
CATH domains 1bkpB00 B:2-279 Thymidylate Synthase, chain A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhh.....................eeeee.eeeee..............hhhhhhhhhhhh......hhhhhhh.....hhh..........hhhhhh...eee..eee.hhhhhhhhhhh.......eee......hhh......eeeeeeeee..eeeeeeee.eee....hhhhhhhhhhhhhhhhhhh......eeeee.eeeeehhhhhhhhhhhh.......eeee......hhh..hhheeee.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------K-----------------------------N------------------------------------S---------------Q------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------THYMIDYLATE_SYNTHASE -------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bkp B 2 TQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV 279
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |