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(-) Description

Title :  BOUND CONFORMATION OF N-TERMINAL CLEAVAGE PRODUCT PEPTIDE MIMIC (P1-P9 OF RELEASE SITE) WHILE BOUND TO HCMV PROTEASE AS DETERMINED BY TRANSFERRED NOESY EXPERIMENTS (P1-P5 SHOWN ONLY), NMR, 32 STRUCTURES
 
Authors :  S. R. Laplante, N. Aubry, P. R. Bonneau, D. R. Cameron, L. Lagace, M. -J. M H. Montpetit, C. Ploufe, S. H. Kawai, B. D. Fulton, Z. Chen, F. Ni
Date :  25 May 98  (Deposition) - 25 May 99  (Release) - 13 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (32x)
NMR Structure *:  A  (1x)
Keywords :  Substriate Cleavage, Bound Conformation, Extended Conformation, Substrate-Based Competitive Inhibitor Design (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. R. Laplante, N. Aubry, P. R. Bonneau, D. R. Cameron, L. Lagace, M. J. Massariol, H. Montpetit, C. Plouffe, S. H. Kawai, B. D. Fulton, Z. Chen, F. Ni
Human Cytomegalovirus Protease Complexes Its Substrate Recognition Sequences In An Extended Peptide Conformation.
Biochemistry V. 37 9793 1998
PubMed-ID: 9657693  |  Reference-DOI: 10.1021/BI980555V

(-) Compounds

Molecule 1 - HCMV PROTEASE R-SITE N-TERMINAL CLEAVAGE PRODUCT
    Chains: A
    Engineered: YES
    Fragment: TERESYVKA N-TERMINAL RESIDUES OF R-SITE PEPTIDE
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
NMR Structure (32x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
NMR Structure * (1, 1)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:4 , SER A:5BINDING SITE FOR RESIDUE ACE A 6

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1BFZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1BFZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:6
                                    
               SCOP domains ------ SCOP domains
               CATH domains ------ CATH domains
               Pfam domains ------ Pfam domains
         Sec.struct. author ...... Sec.struct. author
                 SAPs(SNPs) ------ SAPs(SNPs)
                    PROSITE ------ PROSITE
                 Transcript ------ Transcript
                   1bfz A 6 xSYVKA 1
                            ||||||
                            ||||||
                            6-ACE|
                             5||||
                              4|||
                               3||
                                2|
                                 1
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1BFZ)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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