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(-) Description

Title :  GS-ALPHA COMPLEXED WITH GTP-GAMMA-S
 
Authors :  J. J. G. Tesmer, S. R. Sprang
Date :  20 Nov 97  (Deposition) - 25 Feb 98  (Release) - 07 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Hydrolase, Signal Transducing Protein, Gtp-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. K. Sunahara, J. J. Tesmer, A. G. Gilman, S. R. Sprang
Crystal Structure Of The Adenylyl Cyclase Activator Gsalpha
Science V. 278 1943 1997
PubMed-ID: 9395396  |  Reference-DOI: 10.1126/SCIENCE.278.5345.1943

(-) Compounds

Molecule 1 - GS-ALPHA
    Cellular Location: CYTOPLASM AND INNER PLASMA MEMBRANE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Cellular Location: CYTOPLASM
    Expression System Gene: GNAS
    Expression System Plasmid: PQE60-GSALPHA-H
    Expression System Strain: BL21
    Expression System Taxid: 469008
    Expression System Variant: DE3
    Expression System Vector Type: MULTI-COPY PLASMID
    Gene: GNAS
    Mutation: YES
    Organ: PLASMA
    Organism Common: CATTLE
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: STIMULATORY G-PROTEIN ALPHA SUBUNIT
    Variant: SHORT SPLICE FORM

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 20)

Asymmetric/Biological Unit (3, 20)
No.NameCountTypeFull Name
1GSP2Ligand/Ion5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
2MG2Ligand/IonMAGNESIUM ION
3PO416Ligand/IonPHOSPHATE ION

(-) Sites  (20, 20)

Asymmetric Unit (20, 20)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:54 , THR A:204 , ASP A:223 , GSP A:413 , HOH A:415BINDING SITE FOR RESIDUE MG A 403
02AC2SOFTWAREASP A:378 , HOH A:439 , HIS B:362 , ARG B:374 , ASP B:378BINDING SITE FOR RESIDUE PO4 A 404
03AC3SOFTWARETYR A:37 , ARG A:42 , GLU A:209 , HIS A:220 , PHE A:222 , ASP B:129BINDING SITE FOR RESIDUE PO4 A 405
04AC4SOFTWAREARG A:61 , PHE A:208 , ASP A:223BINDING SITE FOR RESIDUE PO4 A 406
05AC5SOFTWARETHR B:325 , PRO B:326 , GLU B:327 , LYS B:338 , TYR B:339BINDING SITE FOR RESIDUE PO4 B 403
06AC6SOFTWAREASP A:381 , ARG A:385 , ASP B:368 , ASN B:371 , ARG B:374BINDING SITE FOR RESIDUE PO4 B 404
07AC7SOFTWAREARG A:199 , ASP A:295 , GLU A:299BINDING SITE FOR RESIDUE PO4 A 407
08AC8SOFTWAREGLU A:370 , ARG A:373 , ARG A:374 , ASN A:377 , ASN B:377 , ARG B:380BINDING SITE FOR RESIDUE PO4 B 405
09AC9SOFTWAREHIS A:64 , ARG A:373 , ASN A:377 , ARG A:380 , HOH A:440BINDING SITE FOR RESIDUE PO4 A 408
10BC1SOFTWARESER B:54 , THR B:204 , ASP B:223 , VAL B:224 , GSP B:411 , HOH B:413BINDING SITE FOR RESIDUE MG B 406
11BC2SOFTWAREHIS A:362 , ARG A:374 , ASP A:378 , HOH A:414 , ASP B:378BINDING SITE FOR RESIDUE PO4 A 409
12BC3SOFTWAREPHE A:126 , ASP A:129 , TYR B:37 , ARG B:42 , GLU B:209 , HIS B:220 , PHE B:222BINDING SITE FOR RESIDUE PO4 B 407
13BC4SOFTWAREARG B:61 , PHE B:208 , ASP B:223BINDING SITE FOR RESIDUE PO4 B 408
14BC5SOFTWARETHR A:325 , GLU A:327 , LYS A:338 , PHE A:363BINDING SITE FOR RESIDUE PO4 A 410
15BC6SOFTWAREASP A:368 , GLU A:370 , ASN A:371 , ARG A:374 , ASP B:381 , ARG B:385BINDING SITE FOR RESIDUE PO4 A 411
16BC7SOFTWAREARG B:199 , ASP B:295 , GLU B:299BINDING SITE FOR RESIDUE PO4 B 409
17BC8SOFTWAREASN A:377 , ARG A:380 , HOH A:440 , ARG B:373 , ARG B:374 , ASN B:377BINDING SITE FOR RESIDUE PO4 A 412
18BC9SOFTWAREHOH A:437 , HIS B:64 , ARG B:373 , ASN B:377 , HOH B:435BINDING SITE FOR RESIDUE PO4 B 410
19CC1SOFTWAREALA A:48 , GLY A:49 , GLU A:50 , SER A:51 , GLY A:52 , LYS A:53 , SER A:54 , THR A:55 , ASP A:173 , LEU A:198 , ARG A:199 , THR A:204 , GLY A:226 , ASN A:292 , LYS A:293 , ASP A:295 , LEU A:296 , CYS A:365 , ALA A:366 , VAL A:367 , MG A:403 , HOH A:415 , HOH A:420 , HOH A:435 , HOH A:438BINDING SITE FOR RESIDUE GSP A 413
20CC2SOFTWAREALA B:48 , GLY B:49 , GLU B:50 , SER B:51 , GLY B:52 , LYS B:53 , SER B:54 , THR B:55 , ASP B:173 , LEU B:198 , ARG B:199 , LEU B:203 , THR B:204 , GLY B:226 , ASN B:292 , LYS B:293 , ASP B:295 , CYS B:365 , ALA B:366 , VAL B:367 , MG B:406 , HOH B:413 , HOH B:433 , HOH B:438BINDING SITE FOR RESIDUE GSP B 411

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1AZT)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Val A:114 -Pro A:115
2Val B:114 -Pro B:115

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1AZT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1AZT)

(-) Exons   (0, 0)

(no "Exon" information available for 1AZT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:335
 aligned with GNAS2_BOVIN | P04896 from UniProtKB/Swiss-Prot  Length:394

    Alignment length:357
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       
          GNAS2_BOVIN    35 QVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQY 391
               SCOP domains d1azta2 A:35-65,A:202-391      ----------------------d1azta1 A:88-201 Transducin (alpha subunit), insertion domain                                                     d1azta2 A:35-65,A:202-391 Transducin (alpha subunit)                                                                                                                                           SCOP domains
               CATH domains 1aztA01 A:35-88,A:204-390                             1aztA02 A:89-203 GI Alpha 1, domain 2-like                                                                         1aztA01 A:35-88,A:204-390 P-loop containing nucleotide triphosphate hydrolases                                                                                                             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhh.eeeeee......hhhhhhhhhhhh.----------------------.hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh..........hhhhhhhhhhhh.hhhhhhhh.hhh......hhhhhhhhhhhh.......hhhhhh........eeeeeee..eeeeeee....hhh..hhhhh.....eeeeeee..hhh..........hhhhhhhhhhhhh..hhh...eeeeeee.hhhhhhhhhh....hhhh.hhhhh..............hhhhhhhhhhhhhhhhhh.........eeeee.....hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1azt A  35 QVYRATHRLLLLGAGESGKSTIVKQMRILHV----------------------KATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQY 391
                                    44        54        64|        -         -   |    94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       
                                                         65                     88                                                                                                                                                                                                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:340
 aligned with GNAS2_BOVIN | P04896 from UniProtKB/Swiss-Prot  Length:394

    Alignment length:357
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       
          GNAS2_BOVIN    35 QVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQY 391
               SCOP domains d1aztb2 B:35-69,B:202-391          -----------------d1aztb1 B:87-201 Transducin (alpha subunit), insertion domain                                                      d1aztb2 B:35-69,B:202-391 Transducin (alpha subunit)                                                                                                                                           SCOP domains
               CATH domains 1aztB01 B:35-67,B:204-390        1a                 ztB02 B:68-203 GI Alpha 1, domain 2-like                                                                             1aztB01 B:35-67,B:204-390 P-loop containing nucleotide triphosphate hydrolases                                                                                                             - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhh.eeeeeee.....hhhhhhhhhhhh.....-----------------.hhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhh.........hhhhhhhhhhh..hhhhhhhhhhhh......hhhhhhhhhhhh.......hhhhhh........eeeeeee..eeeeeee.......hhhhhhh.....eeeeeeehhhhh..........hhhhhhhhhhhhh..hhh....eeeeee.hhhhhhhhhh.........hhhhh..............hhhhhhhhhhhhhhhhhhhh.......eeeee.....hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1azt B  35 QVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFN-----------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQY 391
                                    44        54        64    |    -         -  |     94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       
                                                             69                87
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1AZT)

(-) Gene Ontology  (23, 23)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (GNAS2_BOVIN | P04896)
molecular function
    GO:0031748    D1 dopamine receptor binding    Interacting selectively and non-covalently with a D1 dopamine receptor.
    GO:0031683    G-protein beta/gamma-subunit complex binding    Interacting selectively and non-covalently with a complex of G-protein beta/gamma subunits.
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0003924    GTPase activity    Catalysis of the reaction: GTP + H2O = GDP + phosphate.
    GO:0031698    beta-2 adrenergic receptor binding    Interacting selectively and non-covalently with a beta-2 adrenergic receptor.
    GO:0051430    corticotropin-releasing hormone receptor 1 binding    Interacting selectively and non-covalently with the corticotropin-releasing hormone receptor 1 (CRHR1). CRHR1 is the major subtype in the pituitary corticotroph, and mediates the stimulatory actions of corticotropin-releasing hormone on corticotropin hormone secretion. CRHR1 are also located in cortical areas of the brain, cerebellum and limbic system.
    GO:0019001    guanyl nucleotide binding    Interacting selectively and non-covalently with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate.
    GO:0005159    insulin-like growth factor receptor binding    Interacting selectively and non-covalently with the insulin-like growth factor receptor.
    GO:0035255    ionotropic glutamate receptor binding    Interacting selectively and non-covalently with an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0031852    mu-type opioid receptor binding    Interacting selectively and non-covalently with a mu-type opioid receptor.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
biological process
    GO:0007186    G-protein coupled receptor signaling pathway    A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).
    GO:0071880    adenylate cyclase-activating adrenergic receptor signaling pathway    The series of molecular signals generated as a consequence of an adrenergic receptor binding to its physiological ligand, where the pathway proceeds with activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP (cAMP).
    GO:0007191    adenylate cyclase-activating dopamine receptor signaling pathway    The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, where the pathway proceeds with activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP (cAMP).
    GO:0043547    positive regulation of GTPase activity    Any process that activates or increases the activity of a GTPase.
    GO:0030819    positive regulation of cAMP biosynthetic process    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
    GO:0043950    positive regulation of cAMP-mediated signaling    Any process which activates, maintains or increases the frequency, rate or extent of cAMP-mediated signaling, a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response.
    GO:0007606    sensory perception of chemical stimulus    The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  1azt
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  GNAS2_BOVIN | P04896
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GNAS2_BOVIN | P04896: 1azs 1cjk 1cjt 1cju 1cjv 1cs4 1cul 1tl7 1u0h 2gvd 2gvz 3c14 3c15 3c16 3g82 3maa 3sn6

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1AZT)