Asymmetric/Biological Unit
Chain A from PDB Type:PROTEIN Length:686
aligned with TRFE_ANAPL | P56410 from UniProtKB/Swiss-Prot Length:686
Alignment length:686
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680
TRFE_ANAPL 1 APPKTTVRWCTISSAEEKKCNSLKDHMQQERVTLSCVQKATYLDCIKAISNNEADAISLDGGQVFEAGLAPYKLKPIAAEVYERSGGSTTSYYAVAVVKKGTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQAVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNGPYSGYSGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAAHAVVARDDSKIDDIWSFLGMQAYSLGVDTTSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVPELMDSQLYLGFEYYSAIQSLRKDQLTVGPRENKIQWCAVGKDEKSKCDRWSVVSNGEVECTILDDNKDCIVKITKGEADAISLDGGFVYTAGVCGLVPVVGESYEDETQCSKDEEQPAYYFAVAVVKKSSAITWNNLQGKKSCHTAVGRTAGWNIPMGLIHNKTGSCDFDDYFSEGCAPGSPPNSRLCKLCQGSGENLLEKCVASSHEKYYGYTGALRCLVEQGDVAFIKHSTVGENVSGSNKDDWAKGLTRDDFELLCTNGKRAKTMDYKTCHLAKVPTHAVVARPEKANKIRELLEGQEKLFGLHGTEKERFMMFQSQTKDLLFKALTKCLVKLRQGITYKEFLGDEYYASVASLNTCNPSDLLQVCTFLEDK 686
SCOP domains d1aova1 A:1-334 Ovotransferrin d1aova2 A:335-686 Ovotransferrin SCOP domains
CATH domains 1aovA01 A:1-91,A:251-339 Periplasmic binding protein-like II 1aovA02 A:92-250 Periplasmic binding protein-like II 1aovA01 A:1-91,A:251-339 Periplasmic binding protein-like II 1aovA03 A:340-433,A:590-686 Periplasmic binding protein-like II 1aovA04 A:434-589 Periplasmic binding protein-like II 1aovA03 A:340-433,A:590-686 Periplasmic binding protein-like II CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeee..hhhhhhhhhhhhhh.....eeeeee...hhhhhhhhh......eee.hhhhhhhh.....eeeeeeee............eeeeee......hhhh...eee..........hhhhhhhhhh.............hhhhhhh..eee........hhhh.................hhhhhhhhhh......eeee.hhhhhhh...hhheeeee...eeeehhhhhh.........eeeee....hhhhhhhhhhhhhh................................eeee......hhhh.hhhhhhhhhhhh............eeeeee.hhhhhhhhhhhhhh...eeeeee..hhhhhhhhh.....eeee.hhhhhhhhh..eee.eeee...................eeee.......hhh....eeee.........hhhhhhhhhhh..........eeee.......hhh.......................hhhhhhhhhhh...eeee....hhhh.......hhh....hhh.eee.....eee...............eeeeehhhhhhhhhhhhhhhhhh...........................eeee......hhhhhhhhhhhhhhhhhhh...hhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ------TRANSFERRIN_LIKE_4 PDB: A:7-333 UniProt: 7-333 -----------TRANSFERRIN_LIKE_4 PDB: A:345-670 UniProt: 345-670 ---------------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------------------TRANSFERRI-----------------------------------------------------------------------------------------TRANSFERRIN_LIKE_---------------TRANSFERRIN_LIKE_3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSFERRI-----------------------------------------------------------------------------------TRANSFERRIN_LIKE--------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1aov A 1 APPKTTVRWCTISSAEEKKCNSLKDHMQQERVTLSCVQKATYLDCIKAISNNEADAISLDGGQVFEAGLAPYKLKPIAAEVYERSGGSTTSYYAVAVVKKGTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQAVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNGPYSGYSGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYKTCNWARVAAHAVVARDDSKIDDIWSFLGMQAYSLGVDTTSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVPELMDSQLYLGFEYYSAIQSLRKDQLTVGPRENKIQWCAVGKDEKSKCDRWSVVSNGEVECTILDDNKDCIVKITKGEADAISLDGGFVYTAGVCGLVPVVGESYEDETQCSKDEEQPAYYFAVAVVKKSSAITWNNLQGKKSCHTAVGRTAGWNIPMGLIHNKTGSCDFDDYFSEGCAPGSPPNSRLCKLCQGSGENLLEKCVASSHEKYYGYTGALRCLVEQGDVAFIKHSTVGENVSGSNKDDWAKGLTRDDFELLCTNGKRAKTMDYKTCHLAKVPTHAVVARPEKANKIRELLEGQEKLFGLHGTEKERFMMFQSQTKDLLFKALTKCLVKLRQGITYKEFLGDEYYASVASLNTCNPSDLLQVCTFLEDK 686
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
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