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(-) Description

Title :  DNA DISTORTION IN BIS-INTERCALATED COMPLEXES
 
Authors :  M. E. Peek, L. A. Lipscomb, J. A. Bertrand, Q. Gao, B. P. Roques, C. Garbay-Jaureguiberry, L. D. Williams
Date :  14 Dec 93  (Deposition) - 31 Aug 94  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Right Handed Dna, Double Helix, Complexed With Drug, Modified (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. E. Peek, L. A. Lipscomb, J. A. Bertrand, Q. Gao, B. P. Roques, C. Garbay-Jaureguiberry, L. D. Williams
Dna Distortion In Bis-Intercalated Complexes.
Biochemistry V. 33 3794 1994
PubMed-ID: 8142381  |  Reference-DOI: 10.1021/BI00179A002
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*(CBR)P*GP*CP*G)-3')
    Chains: A, B
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
2FLD1Ligand/IonBIS-(N-ETHYLPYRIDINIUM-(3-METHOXYCARBAZOLE))HEXANE-1,6-DIAMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECBR A:1 , DG A:2 , DC A:3 , DG A:4 , CBR B:5 , DG B:6 , DC B:7 , DG B:8 , HOH B:11 , HOH B:33BINDING SITE FOR RESIDUE FLD B 9

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 154D)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 154D)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 154D)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 154D)

(-) Exons   (0, 0)

(no "Exon" information available for 154D)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:4
                                  
                   154d A 1 cGCG 4
                            |   
                            |   
                            1-CBR


Chain B from PDB  Type:DNA  Length:4
                                  
                   154d B 5 cGCG 8
                            |   
                            |   
                            5-CBR
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 154D)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 154D)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 154D)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 154D)

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  154d
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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