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5TKF
Asym. Unit
Info
Asym.Unit (449 KB)
Biol.Unit 1 (113 KB)
Biol.Unit 2 (110 KB)
Biol.Unit 3 (110 KB)
Biol.Unit 4 (109 KB)
Biol.Unit 5 (219 KB)
Biol.Unit 6 (215 KB)
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(1)
Title
:
NEUROSPORA CRASSA POLYSACCHARIDE MONOOXYGENASE 2 HIGH MANNOSYLATION
Authors
:
W. B. O'Dell, F. Meilleur
Date
:
06 Oct 16 (Deposition) - 17 May 17 (Release) - 17 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: A,B (1x)
Biol. Unit 6: C,D (1x)
Keywords
:
Oxidoreductase, Polysaccharide Monooxygenase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. B. O'Dell, P. D. Swartz, K. L. Weiss, F. Meilleur
Crystallization Of A Fungal Lytic Polysaccharide Monooxygenase Expressed From Glycoengineered Pichia Pastori For X-Ray And Neutron Diffraction.
Acta Crystallogr F Struct V. 73 70 2017 Biol Commun
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Hetero Components
(4, 20)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
2a: ALPHA-D-MANNOSE (MANa)
2b: ALPHA-D-MANNOSE (MANb)
2c: ALPHA-D-MANNOSE (MANc)
2d: ALPHA-D-MANNOSE (MANd)
2e: ALPHA-D-MANNOSE (MANe)
2f: ALPHA-D-MANNOSE (MANf)
2g: ALPHA-D-MANNOSE (MANg)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3f: N-ACETYL-D-GLUCOSAMINE (NAGf)
3g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4a: OXYGEN MOLECULE (OXYa)
4b: OXYGEN MOLECULE (OXYb)
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Label:
No.
Name
Count
Type
Full Name
1
CU
4
Ligand/Ion
COPPER (II) ION
2
MAN
7
Ligand/Ion
ALPHA-D-MANNOSE
3
NAG
7
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
4
OXY
2
Ligand/Ion
OXYGEN MOLECULE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:1 , HIS A:84 , GLN A:166 , TYR A:168 , HOH B:405
binding site for residue CU A 308
02
AC2
SOFTWARE
GLU A:30 , HOH A:418 , HIS B:84 , HIS B:157 , GLN B:166 , CU B:303
binding site for residue OXY B 309
03
AC3
SOFTWARE
OXY B:309 , HIS B:1 , HIS B:84 , GLN B:166 , TYR B:168
binding site for residue CU B 303
04
AC4
SOFTWARE
HIS C:1 , HIS C:84 , GLN C:166 , TYR C:168 , HOH D:415
binding site for residue CU C 305
05
AC5
SOFTWARE
HIS D:1 , HIS D:84 , GLN D:166 , TYR D:168 , OXY D:303 , HOH D:544
binding site for residue CU D 302
06
AC6
SOFTWARE
GLU C:30 , HIS D:84 , HIS D:157 , GLN D:166 , CU D:302
binding site for residue OXY D 303
07
AC7
SOFTWARE
ASN A:60 , ASP A:114 , GLY A:115 , MET A:116 , ASP A:117 , ARG A:126 , SER A:135 , ILE A:136 , LYS A:137 , HOH A:405 , HOH A:410 , HOH A:411 , HOH A:412 , HOH A:422 , HOH A:435 , HOH A:461 , HOH A:462 , HOH A:476 , HOH A:481 , HOH A:482 , HOH A:510 , HOH A:517 , HOH A:530 , HOH A:533 , SER C:48 , HOH C:467
binding site for Poly-Saccharide residues NAG A 301 through MAN A 307 bound to ASN A 60
08
AC8
SOFTWARE
ASN B:60 , GLN B:112 , GLN B:113 , SER B:135 , ILE B:136 , LYS B:137 , HOH B:406 , HOH B:437 , HOH B:442
binding site for Poly-Saccharide residues NAG B 301 through NAG B 302 bound to ASN B 60
09
AC9
SOFTWARE
SER A:48 , SER A:50 , ASN C:60 , GLN C:112 , ASP C:117 , VAL C:121 , ARG C:126 , SER C:135 , ILE C:136 , LYS C:137 , HOH C:421 , HOH C:445 , HOH C:497 , HOH C:501 , HOH C:505 , HOH C:535 , HOH C:612
binding site for Poly-Saccharide residues NAG C 301 through MAN C 304 bound to ASN C 60
10
AD1
SOFTWARE
ASN D:60 , GLN D:112 , SER D:135 , LYS D:137 , HOH D:428
binding site for Mono-Saccharide NAG D 301 bound to ASN D 60
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (449 KB)
Header - Asym.Unit
Biol.Unit 1 (113 KB)
Header - Biol.Unit 1
Biol.Unit 2 (110 KB)
Header - Biol.Unit 2
Biol.Unit 3 (110 KB)
Header - Biol.Unit 3
Biol.Unit 4 (109 KB)
Header - Biol.Unit 4
Biol.Unit 5 (219 KB)
Header - Biol.Unit 5
Biol.Unit 6 (215 KB)
Header - Biol.Unit 6
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