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5LWW
Asym. Unit
Info
Asym.Unit (106 KB)
Biol.Unit 1 (97 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A LACCASE-LIKE MULTICOPPER OXIDASE MCOG FROM ASPERGILLUS NIGER BOUND TO ZINC
Authors
:
M. Ferraroni, F. Briganti, J. A. Tamayo-Ramos, W. J. H. Van Berkel, A. H
Date
:
19 Sep 16 (Deposition) - 03 May 17 (Release) - 17 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.65
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Ferraroni, A. H. Westphal, M. Borsari, J. A. Tamayo-Ramos, F. Briganti, L. H. De Graaff, W. J. H. Van Berkel
Structure And Function Of Aspergillus Niger Laccase Mcog
Biocatalysis 2017
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Hetero Components
(9, 27)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
3a: CHLORIDE ION (CLa)
4a: COPPER (II) ION (CUa)
4b: COPPER (II) ION (CUb)
4c: COPPER (II) ION (CUc)
4d: COPPER (II) ION (CUd)
5a: GLYCEROL (GOLa)
6a: POTASSIUM ION (Ka)
7a: ALPHA-D-MANNOSE (MANa)
7b: ALPHA-D-MANNOSE (MANb)
8a: N-ACETYL-D-GLUCOSAMINE (NAGa)
8b: N-ACETYL-D-GLUCOSAMINE (NAGb)
8c: N-ACETYL-D-GLUCOSAMINE (NAGc)
8d: N-ACETYL-D-GLUCOSAMINE (NAGd)
8e: N-ACETYL-D-GLUCOSAMINE (NAGe)
8f: N-ACETYL-D-GLUCOSAMINE (NAGf)
8g: N-ACETYL-D-GLUCOSAMINE (NAGg)
9a: ZINC ION (ZNa)
9b: ZINC ION (ZNb)
9c: ZINC ION (ZNc)
9d: ZINC ION (ZNd)
9e: ZINC ION (ZNe)
9f: ZINC ION (ZNf)
9g: ZINC ION (ZNg)
9h: ZINC ION (ZNh)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
BMA
2
Ligand/Ion
BETA-D-MANNOSE
3
CL
1
Ligand/Ion
CHLORIDE ION
4
CU
4
Ligand/Ion
COPPER (II) ION
5
GOL
1
Ligand/Ion
GLYCEROL
6
K
1
Ligand/Ion
POTASSIUM ION
7
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
8
NAG
7
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
9
ZN
8
Ligand/Ion
ZINC ION
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:400 , ARG A:567 , LEU A:569 , TYR A:573
binding site for residue NAG A 605
02
AC2
SOFTWARE
ASN A:103 , SER A:156 , ASP A:195 , TRP A:403 , GLU A:574 , NAG A:601 , NAG A:604 , HOH A:723 , HOH A:810 , HOH A:848
binding site for residue NAG A 606
03
AC3
SOFTWARE
ALA A:570 , BMA A:603 , HOH A:711 , HOH A:856
binding site for residue MAN A 611
04
AC4
SOFTWARE
HIS A:110 , HIS A:152 , HIS A:517 , HOH A:870
binding site for residue CU A 612
05
AC5
SOFTWARE
HIS A:154 , HIS A:451 , HIS A:453 , HIS A:515 , HOH A:870
binding site for residue CU A 613
06
AC6
SOFTWARE
HIS A:108 , HIS A:110 , HIS A:451 , HIS A:453 , HOH A:831
binding site for residue CU A 614
07
AC7
SOFTWARE
HIS A:448 , CYS A:516 , ILE A:518 , HIS A:521 , PHE A:526
binding site for residue CU A 615
08
AC8
SOFTWARE
HIS A:253 , HIS A:521 , CL A:625 , HOH A:884
binding site for residue ZN A 616
09
AC9
SOFTWARE
ASP A:366 , HIS A:477 , HOH A:715 , HOH A:904
binding site for residue ZN A 617
10
AD1
SOFTWARE
HIS A:209 , ASP A:316 , ASP A:368
binding site for residue ZN A 618
11
AD2
SOFTWARE
HIS A:170 , HOH A:886 , HOH A:911
binding site for residue ZN A 619
12
AD3
SOFTWARE
HIS A:328 , ALA A:332 , ASP A:334 , HOH A:801
binding site for residue ZN A 620
13
AD4
SOFTWARE
ASP A:414 , ASP A:416
binding site for residue ZN A 621
14
AD5
SOFTWARE
GLU A:555 , ACT A:626
binding site for residue ZN A 622
15
AD6
SOFTWARE
GLU A:330
binding site for residue ZN A 623
16
AD7
SOFTWARE
ASP A:551 , ASP A:554 , HOH A:798 , HOH A:873
binding site for residue K A 624
17
AD8
SOFTWARE
ZN A:616
binding site for residue CL A 625
18
AD9
SOFTWARE
ASP A:551 , ASP A:554 , GLU A:555 , ZN A:622
binding site for residue ACT A 626
19
AE1
SOFTWARE
HIS A:564 , TYR A:566 , HOH A:773
binding site for residue GOL A 627
20
AE2
SOFTWARE
ASN A:60 , LEU A:73 , MET A:100 , GLU A:101 , ASN A:102 , ASN A:103 , TYR A:562 , NAG A:606 , HOH A:724 , HOH A:850
binding site for Poly-Saccharide residues NAG A 601 through NAG A 602 bound to ASN A 60
21
AE3
SOFTWARE
THR A:83 , GLU A:85 , LEU A:168 , LEU A:181 , MET A:183 , VAL A:184 , ASN A:216 , ARG A:231 , PHE A:233 , HOH A:726 , HOH A:737 , HOH A:740 , HOH A:842 , HOH A:855 , HOH A:861
binding site for Poly-Saccharide residues NAG A 607 through MAN A 610 bound to ASN A 216
22
AE4
SOFTWARE
THR A:193 , ASP A:195 , GLU A:196 , PRO A:572 , NAG A:606 , MAN A:611 , HOH A:782
binding site for Poly-Saccharide residues BMA A 603 through NAG A 604
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (106 KB)
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