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5LDZ
Asym. Unit
Info
Asym.Unit (628 KB)
Biol.Unit 1 (412 KB)
Biol.Unit 2 (413 KB)
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(1)
Title
:
QUADRUPLE SPACE GROUP AMBIGUITY DUE TO ROTATIONAL AND TRANSLATIONAL NON-CRYSTALLOGRAPHIC SYMMETRY IN HUMAN LIVER FRUCTOSE-1,6-BISPHOSPHATASE
Authors
:
A. Ruf, T. Tetaz, B. Schott, C. Joseph, M. G. Rudolph
Date
:
29 Jun 16 (Deposition) - 26 Oct 16 (Release) - 09 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F (2x)
Keywords
:
Phosphoric Monoester, Allosteric Enzyme, Carbohydrate, Metabolism, Gluconeogenesis, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. Ruf, T. Tetaz, B. Schott, C. Joseph, M. G. Rudolph
Quadruple Space Group Ambiguity Due To Rotational And Translational Non-Crystallographic Symmetry In Human Liver Fructose-1, 6-Bisphosphatase
Acta Crystallogr. , Sect. D V. 72 1212 2016
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Hetero Components
(3, 41)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: SULFATE ION (SO4a)
2aa: SULFATE ION (SO4aa)
2ab: SULFATE ION (SO4ab)
2ac: SULFATE ION (SO4ac)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
2j: SULFATE ION (SO4j)
2k: SULFATE ION (SO4k)
2l: SULFATE ION (SO4l)
2m: SULFATE ION (SO4m)
2n: SULFATE ION (SO4n)
2o: SULFATE ION (SO4o)
2p: SULFATE ION (SO4p)
2q: SULFATE ION (SO4q)
2r: SULFATE ION (SO4r)
2s: SULFATE ION (SO4s)
2t: SULFATE ION (SO4t)
2u: SULFATE ION (SO4u)
2v: SULFATE ION (SO4v)
2w: SULFATE ION (SO4w)
2x: SULFATE ION (SO4x)
2y: SULFATE ION (SO4y)
2z: SULFATE ION (SO4z)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
2
SO4
29
Ligand/Ion
SULFATE ION
3
ZN
9
Ligand/Ion
ZINC ION
[
close Hetero Component info
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Sites
(41, 41)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:98 , ASP A:119 , ASP A:122 , GLU A:281 , HOH A:501
binding site for residue ZN A 401
02
AC2
SOFTWARE
GLU A:226 , HIS A:335 , HOH A:570 , HIS B:335
binding site for residue ZN A 402
03
AC3
SOFTWARE
ASP A:122 , GLY A:123 , SER A:124 , SER A:125 , HOH A:501
binding site for residue SO4 A 403
04
AC4
SOFTWARE
LYS A:275 , ARG A:277 , ARG A:314
binding site for residue SO4 A 404
05
AC5
SOFTWARE
ASN A:213 , TYR A:245 , TYR A:265 , HOH A:559 , ARG B:244 , SO4 B:408
binding site for residue SO4 A 405
06
AC6
SOFTWARE
THR A:28 , GLY A:29 , GLU A:30 , LEU A:31 , LYS A:113 , TYR A:114 , HOH A:555
binding site for residue SO4 A 406
07
AC7
SOFTWARE
GLU B:98 , ASP B:119 , ASP B:122 , GLU B:281 , HOH B:505
binding site for residue ZN B 401
08
AC8
SOFTWARE
ASP B:122 , GLY B:123 , SER B:124 , SER B:125 , HOH B:505
binding site for residue SO4 B 402
09
AC9
SOFTWARE
LYS B:275 , ARG B:277 , ARG B:314
binding site for residue SO4 B 403
10
AD1
SOFTWARE
ARG A:244 , ASN B:213 , TYR B:245 , TYR B:265 , LYS B:275 , HOH B:540
binding site for residue SO4 B 404
11
AD2
SOFTWARE
GLY B:27 , THR B:28 , GLY B:29 , GLU B:30 , LEU B:31 , LYS B:113 , TYR B:114 , HOH B:560
binding site for residue SO4 B 405
12
AD3
SOFTWARE
ARG B:277 , ARG B:314
binding site for residue SO4 B 406
13
AD4
SOFTWARE
LYS B:142 , LYS B:143 , SER B:144 , THR B:145 , ASP B:152
binding site for residue SO4 B 407
14
AD5
SOFTWARE
ASN A:213 , TYR A:216 , SO4 A:405 , GLY B:242 , ARG B:244
binding site for residue SO4 B 408
15
AD6
SOFTWARE
LYS B:205
binding site for residue CL B 409
16
AD7
SOFTWARE
GLU C:98 , ASP C:119 , ASP C:122 , GLU C:281 , HOH C:504
binding site for residue ZN C 401
17
AD8
SOFTWARE
ASP C:122 , GLY C:123 , SER C:124 , SER C:125 , HOH C:504
binding site for residue SO4 C 402
18
AD9
SOFTWARE
LYS C:275 , ARG C:277 , ARG C:314 , HOH C:511
binding site for residue SO4 C 403
19
AE1
SOFTWARE
ASN C:213 , TYR C:216 , TYR C:245 , TYR C:265 , LYS C:275 , HOH C:514 , ARG D:244
binding site for residue SO4 C 404
20
AE2
SOFTWARE
THR C:28 , GLY C:29 , GLU C:30 , LEU C:31 , LYS C:113 , TYR C:114
binding site for residue SO4 C 405
21
AE3
SOFTWARE
ARG C:277 , ARG C:314
binding site for residue SO4 C 406
22
AE4
SOFTWARE
GLU D:98 , ASP D:119 , ASP D:122 , GLU D:281 , HOH D:502
binding site for residue ZN D 401
23
AE5
SOFTWARE
GLU D:226 , HIS D:335 , HOH D:578 , HIS F:335
binding site for residue ZN D 402
24
AE6
SOFTWARE
ASP D:122 , GLY D:123 , SER D:124 , SER D:125 , HOH D:502 , HOH D:515
binding site for residue SO4 D 403
25
AE7
SOFTWARE
LYS D:275 , ARG D:277 , ARG D:314
binding site for residue SO4 D 404
26
AE8
SOFTWARE
ARG C:244 , ASN D:213 , TYR D:245 , TYR D:265 , HOH D:513
binding site for residue SO4 D 405
27
AE9
SOFTWARE
GLY D:27 , THR D:28 , GLY D:29 , GLU D:30 , LEU D:31 , TYR D:114 , HOH D:521
binding site for residue SO4 D 406
28
AF1
SOFTWARE
LYS D:205 , HOH D:573
binding site for residue CL D 407
29
AF2
SOFTWARE
GLU E:98 , ASP E:119 , ASP E:122 , GLU E:281 , HOH E:501
binding site for residue ZN E 401
30
AF3
SOFTWARE
PRO C:222 , HIS C:335 , GLU E:226 , HIS E:335 , HOH E:577
binding site for residue ZN E 402
31
AF4
SOFTWARE
ASP E:122 , GLY E:123 , SER E:124 , SER E:125 , HOH E:501 , HOH E:525
binding site for residue SO4 E 403
32
AF5
SOFTWARE
LYS E:275 , ARG E:277 , ARG E:314
binding site for residue SO4 E 404
33
AF6
SOFTWARE
ASN E:213 , TYR E:216 , TYR E:245 , TYR E:265 , LYS E:275 , ARG F:244 , HOH F:543
binding site for residue SO4 E 405
34
AF7
SOFTWARE
THR E:28 , GLY E:29 , GLU E:30 , LEU E:31 , LYS E:113 , TYR E:114
binding site for residue SO4 E 406
35
AF8
SOFTWARE
GLU F:98 , ASP F:119 , ASP F:122 , GLU F:281 , HOH F:502
binding site for residue ZN F 401
36
AF9
SOFTWARE
ASP F:122 , GLY F:123 , SER F:124 , SER F:125 , HOH F:502
binding site for residue SO4 F 402
37
AG1
SOFTWARE
LYS F:275 , ARG F:277 , ARG F:314
binding site for residue SO4 F 403
38
AG2
SOFTWARE
ARG E:244 , ASN F:213 , TYR F:216 , TYR F:245 , TYR F:265 , HOH F:521
binding site for residue SO4 F 404
39
AG3
SOFTWARE
GLY F:27 , THR F:28 , GLY F:29 , GLU F:30 , LEU F:31 , LYS F:113 , TYR F:114 , HOH F:534
binding site for residue SO4 F 405
40
AG4
SOFTWARE
ARG F:277 , ARG F:314
binding site for residue SO4 F 406
41
AG5
SOFTWARE
LYS F:205
binding site for residue CL F 407
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
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Exons
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Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Info
all PFAM domains
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