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5L4N
Asym. Unit
Info
Asym.Unit (182 KB)
Biol.Unit 1 (173 KB)
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(1)
Title
:
LEISHMANIA MAJOR PTERIDINE REDUCTASE 1 (PTR1) IN COMPLEX WITH COMPOUND 1
Authors
:
L. Dello Iacono, F. Di Pisa, C. Pozzi, G. Landi, S. Mangani
Date
:
26 May 16 (Deposition) - 22 Mar 17 (Release) - 29 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Leishmania Major, Pteridine Reductase 1, Ptr1, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Di Pisa, G. Landi, L. Dello Iacono, C. Pozzi, C. Borsari, S. Ferrari, M. Santucci, N. Santarem, A. Cordeiro-Da-Silva, C. B. Moraes, L. M. Alcantara, V. Fontana, L. H. Freitas-Junior, S. Gul M. Kuzikov, B. Behrens, I. Pohner, R. C. Wade, M. P. Costi, S. Mangani
Chroman-4-One Derivatives Targeting Pteridine Reductase 1 And Showing Anti-Parasitic Activity.
Molecules V. 22 2017
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Hetero Components
(8, 17)
Info
All Hetero Components
1a: (2~{R})-2-(3-HYDROXYPHENYL)-6-OXID... (6QTa)
1b: (2~{R})-2-(3-HYDROXYPHENYL)-6-OXID... (6QTb)
2a: ACETATE ION (ACTa)
3a: S-OXY CYSTEINE (CSXa)
3b: S-OXY CYSTEINE (CSXb)
3c: S-OXY CYSTEINE (CSXc)
3d: S-OXY CYSTEINE (CSXd)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
5a: GLYCEROL (GOLa)
6a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
6b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
6c: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPc)
6d: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPd)
7a: DI(HYDROXYETHYL)ETHER (PEGa)
8a: TRIETHYLENE GLYCOL (PGEa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
6QT
2
Ligand/Ion
(2~{R})-2-(3-HYDROXYPHENYL)-6-OXIDANYL-2,3-DIHYDROCHROMEN-4-ONE
2
ACT
1
Ligand/Ion
ACETATE ION
3
CSX
4
Mod. Amino Acid
S-OXY CYSTEINE
4
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
5
GOL
1
Ligand/Ion
GLYCEROL
6
NDP
4
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
7
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
8
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:17 , SER A:111 , PHE A:113 , TYR A:194 , LEU A:226 , LEU A:229 , NDP A:602 , HOH A:739 , ARG D:287
binding site for residue 6QT A 601
02
AC2
SOFTWARE
ARG A:17 , LEU A:18 , HIS A:36 , TYR A:37 , HIS A:38 , ARG A:39 , SER A:40 , ALA A:64 , ASP A:65 , LEU A:66 , SER A:67 , ASN A:109 , ALA A:110 , SER A:111 , SER A:112 , ASP A:142 , MET A:179 , VAL A:180 , ASP A:181 , TYR A:194 , LYS A:198 , PRO A:224 , GLY A:225 , SER A:227 , 6QT A:601 , HOH A:712 , HOH A:718 , HOH A:720 , HOH A:724 , HOH A:727 , HOH A:742 , HOH A:764
binding site for residue NDP A 602
03
AC3
SOFTWARE
TYR A:248 , ARG A:250 , GLN C:216 , LYS C:270
binding site for residue GOL A 603
04
AC4
SOFTWARE
ARG B:17 , SER B:111 , PHE B:113 , TYR B:194 , LEU B:226 , NDP B:602 , HOH B:711 , ARG C:287
binding site for residue 6QT B 601
05
AC5
SOFTWARE
ARG B:17 , LEU B:18 , TYR B:37 , HIS B:38 , ARG B:39 , SER B:40 , ALA B:64 , ASP B:65 , LEU B:66 , SER B:67 , ASN B:109 , ALA B:110 , SER B:111 , SER B:112 , ASP B:142 , MET B:179 , VAL B:180 , ASP B:181 , TYR B:194 , LYS B:198 , PRO B:224 , GLY B:225 , LEU B:226 , SER B:227 , 6QT B:601 , HOH B:719 , HOH B:722 , HOH B:723 , HOH B:752 , HOH B:758 , HOH B:768
binding site for residue NDP B 602
06
AC6
SOFTWARE
ASP B:251 , SER B:252
binding site for residue ACT B 603
07
AC7
SOFTWARE
ARG C:17 , LEU C:18 , HIS C:36 , TYR C:37 , HIS C:38 , ARG C:39 , SER C:40 , ALA C:64 , ASP C:65 , LEU C:66 , ASN C:109 , ALA C:110 , SER C:111 , SER C:112 , ASP C:142 , VAL C:180 , ASP C:181 , TYR C:194 , LYS C:198 , PRO C:224 , GLY C:225 , LEU C:226 , SER C:227 , HOH C:421 , HOH C:445 , HOH C:446 , HOH C:453 , HOH C:466
binding site for residue NDP C 301
08
AC8
SOFTWARE
LYS A:270 , TYR C:248 , ARG C:250
binding site for residue PEG C 302
09
AC9
SOFTWARE
ARG D:17 , LEU D:18 , HIS D:36 , TYR D:37 , HIS D:38 , ARG D:39 , SER D:40 , ALA D:64 , ASP D:65 , LEU D:66 , SER D:67 , ASN D:109 , ALA D:110 , SER D:111 , SER D:112 , ASP D:142 , MET D:179 , VAL D:180 , ASP D:181 , TYR D:194 , LYS D:198 , PRO D:224 , GLY D:225 , LEU D:226 , SER D:227 , HOH D:406 , HOH D:415 , HOH D:419 , HOH D:468 , HOH D:473 , HOH D:474
binding site for residue NDP D 301
10
AD1
SOFTWARE
TYR D:248 , ARG D:250
binding site for residue PGE D 302
11
AD2
SOFTWARE
LYS D:168
binding site for residue EDO D 303
12
AD3
SOFTWARE
ASN D:57 , SER D:58 , TRP D:100
binding site for residue EDO D 304
13
AD4
SOFTWARE
ARG C:20 , THR C:50 , ARG D:20 , THR D:50
binding site for residue EDO D 305
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SAPs(SNPs)/Variants
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (182 KB)
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