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5KH7
Asym. Unit
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Asym.Unit (26 KB)
Biol.Unit 1 (21 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FRAGMENT (3-[6-OXO-3-(3-PYRIDINYL)-1(6H)-PYRIDAZINYL]PROPANOIC ACID) BOUND IN THE UBIQUITIN BINDING POCKET OF THE HDAC6 ZINC-FINGER DOMAIN
Authors
:
R. J. Harding, J. Walker, M. Ravichandran, R. Ferreira De Freitas, M. C. Bountra, A. M. Edwards, V. Santhakumar, C. M. Arrowsmith, Structur Genomics Consortium (Sgc)
Date
:
14 Jun 16 (Deposition) - 27 Jul 16 (Release) - 27 Jul 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Histone Deacetylase, Hdac, Hdac6, Fragment Screening, Structural Genomics Consortium, Sgc, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
R. J. Harding, J. Walker, M. Ravichandran, R. Ferreira De Freitas, M. Schapira, C. Bountra, A. M. Edwards, V. Santhakumar, C. M. Arrowsmith, Structural Genomics Consortium (Sgc)
Crystal Structure Of Fragment (3-[6-Oxo-3-(3-Pyridinyl)-1(6H)-Pyridazinyl]Propanoic Acid) Bound In The Ubiquitin Binding Pocket Of The Hdac6 Zinc-Finger Domain
To Be Published
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Hetero Components
(3, 19)
Info
All Hetero Components
1a: 3-(6-OXIDANYLIDENE-3-PYRIDIN-3-YL-... (6T7a)
2a: UNKNOWN ATOM OR ION (UNXa)
2b: UNKNOWN ATOM OR ION (UNXb)
2c: UNKNOWN ATOM OR ION (UNXc)
2d: UNKNOWN ATOM OR ION (UNXd)
2e: UNKNOWN ATOM OR ION (UNXe)
2f: UNKNOWN ATOM OR ION (UNXf)
2g: UNKNOWN ATOM OR ION (UNXg)
2h: UNKNOWN ATOM OR ION (UNXh)
2i: UNKNOWN ATOM OR ION (UNXi)
2j: UNKNOWN ATOM OR ION (UNXj)
2k: UNKNOWN ATOM OR ION (UNXk)
2l: UNKNOWN ATOM OR ION (UNXl)
2m: UNKNOWN ATOM OR ION (UNXm)
2n: UNKNOWN ATOM OR ION (UNXn)
2o: UNKNOWN ATOM OR ION (UNXo)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
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No.
Name
Count
Type
Full Name
1
6T7
1
Ligand/Ion
3-(6-OXIDANYLIDENE-3-PYRIDIN-3-YL-PYRIDAZIN-1-YL)PROPANOIC ACID
2
UNX
15
Ligand/Ion
UNKNOWN ATOM OR ION
3
ZN
3
Ligand/Ion
ZINC ION
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Sites
(4, 4)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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Residues
Description
1
AC1
SOFTWARE
CYS A:1145 , CYS A:1148 , HIS A:1164 , HIS A:1170
binding site for residue ZN A 1301
2
AC2
SOFTWARE
CYS A:1133 , CYS A:1136 , CYS A:1153 , HIS A:1160
binding site for residue ZN A 1302
3
AC3
SOFTWARE
CYS A:1113 , HIS A:1115 , CYS A:1183 , CYS A:1186
binding site for residue ZN A 1303
4
AC4
SOFTWARE
TRP A:1143 , GLY A:1154 , ARG A:1155 , TRP A:1182 , TYR A:1184 , TYR A:1189 , HIS A:1203 , HOH A:1409
binding site for residue 6T7 A 1304
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Asymmetric Unit 1
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