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5JRR
Asym. Unit
Info
Asym.Unit (101 KB)
Biol.Unit 1 (95 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF NATIVE LACCASE FROM THERMUS THERMOPHILUS HB27
Authors
:
A. Diaz-Vilchis, R. R. Ruiz-Arellano, E. Rosas-Benitez, E. Rudino-Pi
Date
:
06 May 16 (Deposition) - 10 May 17 (Release) - 10 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase, Multicopper Oxidases
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Diaz-Vilchis, R. R. Ruiz-Arellano, E. Rosas-Benitez, V. Stojanoff, E. Rudino-Pinera
Preserving Metallic Sites Affected By Radiation Damage: The Cut2 Case In Thermus Thermophilus Multicopper Oxidase
To Be Published
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Hetero Components
(4, 19)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
2a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
2b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
2c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
2d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
2e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
2f: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDf)
2g: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDg)
2h: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDh)
2i: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDi)
2j: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDj)
2k: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDk)
2l: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDl)
2m: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDm)
3a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
4a: OXYGEN MOLECULE (OXYa)
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Label:
No.
Name
Count
Type
Full Name
1
CU
4
Ligand/Ion
COPPER (II) ION
2
MPD
13
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
3
MRD
1
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
4
OXY
1
Ligand/Ion
OXYGEN MOLECULE
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:95 , HIS A:137 , HIS A:398 , HIS A:444 , CU A:504 , OXY A:519
binding site for residue CU A 501
02
AC2
SOFTWARE
HIS A:97 , TRP A:133 , HIS A:135 , HIS A:446 , OXY A:519
binding site for residue CU A 502
03
AC3
SOFTWARE
HIS A:393 , CYS A:445 , HIS A:450 , MET A:455
binding site for residue CU A 503
04
AC4
SOFTWARE
HIS A:95 , HIS A:97 , HIS A:396 , HIS A:398 , CU A:501 , OXY A:519
binding site for residue CU A 504
05
AC5
SOFTWARE
ASP A:248 , LEU A:263 , GLU A:267 , ARG A:268 , TYR A:414 , LYS A:418 , MPD A:512
binding site for residue MPD A 505
06
AC6
SOFTWARE
GLY A:140 , TRP A:194 , ARG A:453 , MPD A:511 , MPD A:513
binding site for residue MPD A 506
07
AC7
SOFTWARE
GLU A:127 , LEU A:128 , SER A:158 , SER A:334 , HOH A:794 , HOH A:823 , HOH A:834
binding site for residue MPD A 507
08
AC8
SOFTWARE
GLY A:55 , GLN A:56 , LEU A:339 , ARG A:436 , HOH A:696
binding site for residue MPD A 508
09
AC9
SOFTWARE
MET A:295 , MET A:355
binding site for residue MPD A 509
10
AD1
SOFTWARE
PRO A:28 , PHE A:67 , ASN A:206 , HOH A:802 , HOH A:816
binding site for residue MPD A 510
11
AD2
SOFTWARE
PRO A:144 , PRO A:188 , HIS A:189 , TRP A:194 , MPD A:506 , HOH A:672
binding site for residue MPD A 511
12
AD3
SOFTWARE
LEU A:256 , VAL A:258 , GLU A:260 , LEU A:261 , MPD A:505 , HOH A:822
binding site for residue MPD A 512
13
AD4
SOFTWARE
PRO A:191 , TRP A:194 , ARG A:453 , MPD A:506 , HOH A:826
binding site for residue MPD A 513
14
AD5
SOFTWARE
LYS A:104 , ARG A:280 , TYR A:317 , LYS A:438 , HOH A:612
binding site for residue MPD A 514
15
AD6
SOFTWARE
PRO A:241 , GLU A:257 , ARG A:276 , PRO A:324 , LYS A:325 , PRO A:326
binding site for residue MPD A 515
16
AD7
SOFTWARE
SER A:26 , VAL A:214 , GLN A:216 , ASN A:362 , GLN A:364
binding site for residue MPD A 516
17
AD8
SOFTWARE
LYS A:31 , LYS A:43 , LEU A:44 , GLY A:64 , HOH A:648
binding site for residue MRD A 517
18
AD9
SOFTWARE
PRO A:342 , VAL A:343 , VAL A:344 , THR A:345
binding site for residue MPD A 518
19
AE1
SOFTWARE
HIS A:95 , HIS A:97 , HIS A:135 , HIS A:137 , HIS A:396 , HIS A:398 , HIS A:444 , HIS A:446 , CU A:501 , CU A:502 , CU A:504 , HOH A:638
binding site for residue OXY A 519
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Chain A
Asymmetric Unit 1
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