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5JJN
Asym. Unit
Info
Asym.Unit (190 KB)
Biol.Unit 1 (180 KB)
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(1)
Title
:
STRUCTURE OF THE SRII/HTRII(G83F) COMPLEX IN P212121 SPACE GROUP ("V" SHAPE)
Authors
:
A. Ishchenko, E. Round, V. Borshchevskiy, S. Grudinin, I. Gushchin, J. A. Remeeva, V. Polovinkin, P. Utrobin, T. Balandin, M. Engelhard, G. B V. Gordeliy
Date
:
24 Apr 16 (Deposition) - 15 Feb 17 (Release) - 15 Feb 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Sensory Rhodopsin Ii, Transducer, Membrane Protein Complex, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Ishchenko, E. Round, V. Borshchevskiy, S. Grudinin, I. Gushchin, J. P. Klare, A. Remeeva, V. Polovinkin, P. Utrobin, T. Balandin, M. Engelhard, G. Buldt, V. Gordeliy
New Insights On Signal Propagation By Sensory Rhodopsin Ii/Transducer Complex.
Sci Rep V. 7 41811 2017
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Hetero Components
(3, 19)
Info
All Hetero Components
1a: B-OCTYLGLUCOSIDE (BOGa)
1b: B-OCTYLGLUCOSIDE (BOGb)
2a: EICOSANE (LFAa)
2b: EICOSANE (LFAb)
2c: EICOSANE (LFAc)
2d: EICOSANE (LFAd)
2e: EICOSANE (LFAe)
2f: EICOSANE (LFAf)
2g: EICOSANE (LFAg)
2h: EICOSANE (LFAh)
2i: EICOSANE (LFAi)
2j: EICOSANE (LFAj)
2k: EICOSANE (LFAk)
2l: EICOSANE (LFAl)
2m: EICOSANE (LFAm)
2n: EICOSANE (LFAn)
2o: EICOSANE (LFAo)
3a: RETINAL (RETa)
3b: RETINAL (RETb)
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No.
Name
Count
Type
Full Name
1
BOG
2
Ligand/Ion
B-OCTYLGLUCOSIDE
2
LFA
15
Ligand/Ion
EICOSANE
3
RET
2
Ligand/Ion
RETINAL
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:45
binding site for residue LFA A 302
02
AC2
SOFTWARE
ALA A:23 , GLY A:26
binding site for residue LFA A 303
03
AC3
SOFTWARE
THR C:103
binding site for residue LFA A 304
04
AC4
SOFTWARE
VAL A:142
binding site for residue LFA A 306
05
AC5
SOFTWARE
VAL A:138 , ALA A:172
binding site for residue LFA A 308
06
AC6
SOFTWARE
GLY A:32 , TYR A:36 , TYR A:37 , ARG A:152 , ILE A:156 , ALA A:212 , LEU A:219
binding site for residue BOG A 309
07
AC7
SOFTWARE
TRP A:76 , THR A:80 , VAL A:108 , MET A:109 , GLY A:112 , PHE A:127 , PHE A:134 , TRP A:171 , TYR A:174 , PRO A:175 , ASP A:201 , THR A:204 , LYS A:205
binding site for residue RET A 310
08
AC8
SOFTWARE
MET A:129 , GLY A:136
binding site for residue LFA A 311
09
AC9
SOFTWARE
ILE C:121
binding site for residue LFA C 301
10
AD1
SOFTWARE
TRP A:60 , ILE A:74
binding site for residue LFA C 302
11
AD2
SOFTWARE
LEU C:16
binding site for residue LFA C 303
12
AD3
SOFTWARE
VAL C:142
binding site for residue LFA C 304
13
AD4
SOFTWARE
GLY C:32 , TYR C:36 , TYR C:37 , ARG C:152 , LEU C:213 , ALA C:216 , HOH C:429
binding site for residue BOG C 305
14
AD5
SOFTWARE
MET C:15 , ILE C:43 , ALA C:47 , TRP C:76 , THR C:79 , THR C:80 , VAL C:108 , GLY C:112 , PHE C:127 , PHE C:134 , TRP C:171 , TYR C:174 , PRO C:175 , ASP C:201 , LEU C:202 , VAL C:203 , THR C:204 , VAL C:206 , GLY C:207 , PHE C:208 , GLY C:209 , HOH C:402
binding site for Di-peptide RET C 307 and LYS C 205
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (190 KB)
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