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5EV8
Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (41 KB)
Biol.Unit 2 (41 KB)
Biol.Unit 3 (42 KB)
Biol.Unit 4 (40 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE IMP-1 IN COMPLEX WITH THE BISTHIAZOLIDINE INHIBITOR D-CS319
Authors
:
P. Hinchliffe, J. Spencer
Date
:
19 Nov 15 (Deposition) - 01 Jun 16 (Release) - 20 Jul 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Inhibitor, Carbapenemase, Antibiotic Resistance, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Hinchliffe, M. M. Gonzalez, M. F. Mojica, J. M. Gonzalez, V. Castillo, C. Saiz, M. Kosmopoulou, C. L. Tooke, L. I. Llarrull, G. Mahler, R. A. Bonomo, A. J. Vila, J. Spencer
Cross-Class Metallo-Beta-Lactamase Inhibition By Bisthiazolidines Reveals Multiple Binding Modes.
Proc. Natl. Acad. Sci. Usa V. 113 E3745 2016
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Hetero Components
(6, 22)
Info
All Hetero Components
1a: (3S,5S,7AR)-5-(SULFANYLMETHYL)TETR... (3R9a)
1b: (3S,5S,7AR)-5-(SULFANYLMETHYL)TETR... (3R9b)
1c: (3S,5S,7AR)-5-(SULFANYLMETHYL)TETR... (3R9c)
1d: (3S,5S,7AR)-5-(SULFANYLMETHYL)TETR... (3R9d)
1e: (3S,5S,7AR)-5-(SULFANYLMETHYL)TETR... (3R9e)
2a: CHLORIDE ION (CLa)
3a: DIMETHYL SULFOXIDE (DMSa)
3b: DIMETHYL SULFOXIDE (DMSb)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
5a: SODIUM ION (NAa)
6a: ZINC ION (ZNa)
6b: ZINC ION (ZNb)
6c: ZINC ION (ZNc)
6d: ZINC ION (ZNd)
6e: ZINC ION (ZNe)
6f: ZINC ION (ZNf)
6g: ZINC ION (ZNg)
6h: ZINC ION (ZNh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3R9
5
Ligand/Ion
(3S,5S,7AR)-5-(SULFANYLMETHYL)TETRAHYDRO[1,3]THIAZOLO[4,3-B][1,3]THIAZOLE-3-CARBOXYLIC ACID
2
CL
1
Ligand/Ion
CHLORIDE ION
3
DMS
2
Ligand/Ion
DIMETHYL SULFOXIDE
4
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
5
NA
1
Ligand/Ion
SODIUM ION
6
ZN
8
Ligand/Ion
ZINC ION
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:77 , HIS A:79 , HIS A:139 , ZN A:302 , 3R9 A:303
binding site for residue ZN A 301
02
AC2
SOFTWARE
ASP A:81 , CYS A:158 , HIS A:197 , ZN A:301 , 3R9 A:303
binding site for residue ZN A 302
03
AC3
SOFTWARE
VAL A:31 , HIS A:79 , ASP A:81 , HIS A:139 , CYS A:158 , LYS A:161 , ASN A:167 , HIS A:197 , ZN A:301 , ZN A:302
binding site for residue 3R9 A 303
04
AC4
SOFTWARE
GLY A:110 , LYS A:111 , VAL A:112 , HOH A:428 , TRP C:28 , CL C:307
binding site for residue 3R9 A 304
05
AC5
SOFTWARE
ASP B:81 , CYS B:158 , HIS B:197 , ZN B:302 , 3R9 B:303
binding site for residue ZN B 301
06
AC6
SOFTWARE
HIS B:77 , HIS B:79 , HIS B:139 , ZN B:301 , 3R9 B:303
binding site for residue ZN B 302
07
AC7
SOFTWARE
HIS B:77 , HIS B:79 , ASP B:81 , HIS B:139 , CYS B:158 , LYS B:161 , LEU B:165 , GLY B:166 , ASN B:167 , HIS B:197 , ZN B:301 , ZN B:302 , HOH B:443
binding site for residue 3R9 B 303
08
AC8
SOFTWARE
GLU B:65 , THR B:83 , GLY B:84 , ILE B:86 , GLU B:87 , VAL B:112 , HOH B:423
binding site for residue EDO B 304
09
AC9
SOFTWARE
ASN A:116 , ASN B:90 , VAL B:112 , GLN B:113 , HOH B:455
binding site for residue EDO B 305
10
AD1
SOFTWARE
TYR A:97 , LEU A:125 , LYS B:107 , GLN B:113 , HOH B:410 , HOH B:430
binding site for residue EDO B 306
11
AD2
SOFTWARE
GLU B:14 , GLY B:15 , VAL B:16 , VAL B:38 , LEU B:39 , GLU B:150 , ARG B:151 , HOH B:435
binding site for residue DMS B 307
12
AD3
SOFTWARE
HIS C:77 , HIS C:79 , HIS C:139 , ZN C:302 , 3R9 C:303
binding site for residue ZN C 301
13
AD4
SOFTWARE
CYS C:158 , HIS C:197 , ZN C:301 , 3R9 C:303
binding site for residue ZN C 302
14
AD5
SOFTWARE
GLU A:87 , GLU C:23 , HIS C:77 , HIS C:79 , HIS C:139 , CYS C:158 , LYS C:161 , LEU C:165 , GLY C:166 , ASN C:167 , HIS C:197 , ZN C:301 , ZN C:302
binding site for residue 3R9 C 303
15
AD6
SOFTWARE
LYS C:108 , ASP C:109 , ASP C:170 , HOH C:413 , HOH C:458
binding site for residue EDO C 304
16
AD7
SOFTWARE
SER C:99 , PHE C:118 , GLY C:120 , HOH C:403 , HOH C:453
binding site for residue DMS C 305
17
AD8
SOFTWARE
3R9 A:304
binding site for residue CL C 307
18
AD9
SOFTWARE
HIS D:77 , HIS D:79 , HIS D:139 , ZN D:302 , 3R9 D:303
binding site for residue ZN D 301
19
AE1
SOFTWARE
ASP D:81 , CYS D:158 , HIS D:197 , ZN D:301 , 3R9 D:303
binding site for residue ZN D 302
20
AE2
SOFTWARE
HIS D:79 , ASP D:81 , HIS D:139 , CYS D:158 , LYS D:161 , GLY D:166 , ASN D:167 , HIS D:197 , ZN D:301 , ZN D:302
binding site for residue 3R9 D 303
21
AE3
SOFTWARE
LYS C:108 , GLY D:27
binding site for residue EDO D 304
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Asym.Unit (156 KB)
Header - Asym.Unit
Biol.Unit 1 (41 KB)
Header - Biol.Unit 1
Biol.Unit 2 (41 KB)
Header - Biol.Unit 2
Biol.Unit 3 (42 KB)
Header - Biol.Unit 3
Biol.Unit 4 (40 KB)
Header - Biol.Unit 4
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