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5B6T
Asym. Unit
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Asym.Unit (120 KB)
Biol.Unit 1 (60 KB)
Biol.Unit 2 (59 KB)
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(1)
Title
:
CATALYTIC DOMAIN OF COPRINOPSIS CINEREA GH62 ALPHA-L-ARABINOFURANOSIDASE COMPLEXED WITH PB
Authors
:
T. Tonozuka
Date
:
01 Jun 16 (Deposition) - 07 Sep 16 (Release) - 15 Feb 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.48
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Coprinopsis Cinerea, Alpha-L-Arabinofuranosidase, Arabinoxylan, Gh62, Hemicellulose, Hydrolase
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Reference
:
T. Tonozuka, Y. Tanaka, S. Okuyama, T. Miyazaki, A. Nishikawa, M. Yoshida
Structure Of The Catalytic Domain Of Alpha-L-Arabinofuranosidase From Coprinopsis Cinerea, Ccabf62A, Provides Insights Into Structure-Function Relationships In Glycoside Hydrolase Family 62
Appl. Biochem. Biotechnol. V. 181 511 2017
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: LEAD (II) ION (PBa)
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No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
2
GOL
6
Ligand/Ion
GLYCEROL
3
PB
1
Ligand/Ion
LEAD (II) ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:276 , TYR A:380 , GOL A:502 , HOH A:717 , HOH A:768
binding site for residue PB A 500
2
AC2
SOFTWARE
HIS A:346 , HOH A:619 , HOH A:673 , HOH A:799 , HOH A:847 , HOH A:876
binding site for residue CA A 501
3
AC3
SOFTWARE
LYS A:108 , ASP A:109 , TYR A:131 , GLN A:181 , VAL A:223 , ASP A:224 , TYR A:380 , PB A:500 , HOH A:631 , HOH A:665
binding site for residue GOL A 502
4
AC4
SOFTWARE
PHE A:149 , TYR A:150 , TYR A:151 , HOH A:644 , HOH A:700 , ILE B:212 , ASN B:215
binding site for residue GOL A 503
5
AC5
SOFTWARE
TYR A:135 , SER A:137 , SER A:148 , HOH A:610 , HOH A:830
binding site for residue GOL A 504
6
AC6
SOFTWARE
ARG A:214 , ASN A:215 , HOH A:618 , HOH A:649
binding site for residue GOL A 505
7
AC7
SOFTWARE
HIS B:346 , HOH B:634 , HOH B:639 , HOH B:769 , HOH B:833 , HOH B:836
binding site for residue CA B 501
8
AC8
SOFTWARE
LYS B:108 , ASP B:109 , TYR B:131 , GLN B:181 , VAL B:223 , ASP B:224 , TYR B:380 , HOH B:622 , HOH B:670
binding site for residue GOL B 502
9
AC9
SOFTWARE
ARG A:87 , ALA A:330 , ASN A:331 , VAL A:333 , ALA A:334 , HOH A:638 , ASP B:153 , GLN B:154 , ALA B:155 , GLY B:158 , THR B:159 , HOH B:714
binding site for residue GOL B 503
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Exons
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SCOP Domains
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CATH Domains
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Asym.Unit (120 KB)
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