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5B3S
Asym. Unit
Info
Asym.Unit (1.4 MB)
Biol.Unit 1 (693 KB)
Biol.Unit 2 (685 KB)
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Title
:
BOVINE HEART CYTOCHROME C OXIDASE IN THE CARBON MONOXIDE-BOUND MIXED-VALENCE STATE AT 1.68 ANGSTROM RESOLUTION (50 K)
Authors
:
J. Baba, A. Shimada, E. Yamashita, K. Shinzawa-Ito, S. Yoshikawa, T. Ts
Date
:
11 Mar 16 (Deposition) - 22 Mar 17 (Release) - 22 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.68
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M (1x)
Biol. Unit 2: N,O,P,Q,R,S,T,U,V,W,X,Y,Z (1x)
Keywords
:
Oxidoreductase, Proton Pump, Heme, Respiratory Chain
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Shimada, J. Baba, E. Yamashita, K. Shinzawa-Ito, S. Yoshikawa, T. Tsukihara
Bovine Heart Cytochrome C Oxidase In The Carbon Monoxide-Bound Mixed-Valence State At 1. 68 Angstrom Resolution (50 K)
To Be Published
[
close entry info
]
Hetero Components
(18, 110)
Info
All Hetero Components
01a: CARDIOLIPIN (CDLa)
01b: CARDIOLIPIN (CDLb)
01c: CARDIOLIPIN (CDLc)
01d: CARDIOLIPIN (CDLd)
02a: CHOLIC ACID (CHDa)
02b: CHOLIC ACID (CHDb)
02c: CHOLIC ACID (CHDc)
02d: CHOLIC ACID (CHDd)
02e: CHOLIC ACID (CHDe)
02f: CHOLIC ACID (CHDf)
02g: CHOLIC ACID (CHDg)
02h: CHOLIC ACID (CHDh)
03a: CARBON MONOXIDE (CMOa)
03b: CARBON MONOXIDE (CMOb)
05a: DINUCLEAR COPPER ION (CUAa)
05b: DINUCLEAR COPPER ION (CUAb)
04a: COPPER (II) ION (CUa)
05b: COPPER (II) ION (CUb)
06a: DECYL-BETA-D-MALTOPYRANOSIDE (DMUa)
06b: DECYL-BETA-D-MALTOPYRANOSIDE (DMUb)
06c: DECYL-BETA-D-MALTOPYRANOSIDE (DMUc)
06d: DECYL-BETA-D-MALTOPYRANOSIDE (DMUd)
07a: 1,2-ETHANEDIOL (EDOa)
07aa: 1,2-ETHANEDIOL (EDOaa)
07ab: 1,2-ETHANEDIOL (EDOab)
07ac: 1,2-ETHANEDIOL (EDOac)
07ad: 1,2-ETHANEDIOL (EDOad)
07ae: 1,2-ETHANEDIOL (EDOae)
07af: 1,2-ETHANEDIOL (EDOaf)
07ag: 1,2-ETHANEDIOL (EDOag)
07ah: 1,2-ETHANEDIOL (EDOah)
07ai: 1,2-ETHANEDIOL (EDOai)
07aj: 1,2-ETHANEDIOL (EDOaj)
07ak: 1,2-ETHANEDIOL (EDOak)
07al: 1,2-ETHANEDIOL (EDOal)
07am: 1,2-ETHANEDIOL (EDOam)
07an: 1,2-ETHANEDIOL (EDOan)
07ao: 1,2-ETHANEDIOL (EDOao)
07ap: 1,2-ETHANEDIOL (EDOap)
07aq: 1,2-ETHANEDIOL (EDOaq)
07ar: 1,2-ETHANEDIOL (EDOar)
07as: 1,2-ETHANEDIOL (EDOas)
07at: 1,2-ETHANEDIOL (EDOat)
07au: 1,2-ETHANEDIOL (EDOau)
07av: 1,2-ETHANEDIOL (EDOav)
07b: 1,2-ETHANEDIOL (EDOb)
07c: 1,2-ETHANEDIOL (EDOc)
07d: 1,2-ETHANEDIOL (EDOd)
07e: 1,2-ETHANEDIOL (EDOe)
07f: 1,2-ETHANEDIOL (EDOf)
07g: 1,2-ETHANEDIOL (EDOg)
07h: 1,2-ETHANEDIOL (EDOh)
07i: 1,2-ETHANEDIOL (EDOi)
07j: 1,2-ETHANEDIOL (EDOj)
07k: 1,2-ETHANEDIOL (EDOk)
07l: 1,2-ETHANEDIOL (EDOl)
07m: 1,2-ETHANEDIOL (EDOm)
07n: 1,2-ETHANEDIOL (EDOn)
07o: 1,2-ETHANEDIOL (EDOo)
07p: 1,2-ETHANEDIOL (EDOp)
07q: 1,2-ETHANEDIOL (EDOq)
07r: 1,2-ETHANEDIOL (EDOr)
07s: 1,2-ETHANEDIOL (EDOs)
07t: 1,2-ETHANEDIOL (EDOt)
07u: 1,2-ETHANEDIOL (EDOu)
07v: 1,2-ETHANEDIOL (EDOv)
07w: 1,2-ETHANEDIOL (EDOw)
07x: 1,2-ETHANEDIOL (EDOx)
07y: 1,2-ETHANEDIOL (EDOy)
07z: 1,2-ETHANEDIOL (EDOz)
08a: N-FORMYLMETHIONINE (FMEa)
08b: N-FORMYLMETHIONINE (FMEb)
08c: N-FORMYLMETHIONINE (FMEc)
08d: N-FORMYLMETHIONINE (FMEd)
09a: HEME-A (HEAa)
09b: HEME-A (HEAb)
09c: HEME-A (HEAc)
09d: HEME-A (HEAd)
10a: MAGNESIUM ION (MGa)
10b: MAGNESIUM ION (MGb)
11a: SODIUM ION (NAa)
11b: SODIUM ION (NAb)
12a: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKa)
12b: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKb)
12c: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKc)
12d: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKd)
12e: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKe)
12f: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)P... (PEKf)
13a: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVa)
13b: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVb)
13c: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVc)
13d: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVd)
13e: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVe)
13f: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVf)
13g: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVg)
13h: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVh)
14a: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIME... (PSCa)
14b: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIME... (PSCb)
15a: N-ACETYL-SERINE (SACa)
15b: N-ACETYL-SERINE (SACb)
16a: TRISTEAROYLGLYCEROL (TGLa)
16b: TRISTEAROYLGLYCEROL (TGLb)
16c: TRISTEAROYLGLYCEROL (TGLc)
16d: TRISTEAROYLGLYCEROL (TGLd)
16e: TRISTEAROYLGLYCEROL (TGLe)
16f: TRISTEAROYLGLYCEROL (TGLf)
17a: PHOSPHOTHREONINE (TPOa)
17b: PHOSPHOTHREONINE (TPOb)
18a: ZINC ION (ZNa)
18b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CDL
4
Ligand/Ion
CARDIOLIPIN
2
CHD
8
Ligand/Ion
CHOLIC ACID
3
CMO
2
Ligand/Ion
CARBON MONOXIDE
4
CU
2
Ligand/Ion
COPPER (II) ION
5
CUA
2
Ligand/Ion
DINUCLEAR COPPER ION
6
DMU
4
Ligand/Ion
DECYL-BETA-D-MALTOPYRANOSIDE
7
EDO
48
Ligand/Ion
1,2-ETHANEDIOL
8
FME
4
Mod. Amino Acid
N-FORMYLMETHIONINE
9
HEA
4
Ligand/Ion
HEME-A
10
MG
2
Ligand/Ion
MAGNESIUM ION
11
NA
2
Ligand/Ion
SODIUM ION
12
PEK
6
Ligand/Ion
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
13
PGV
8
Ligand/Ion
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
14
PSC
2
Ligand/Ion
(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
15
SAC
2
Mod. Amino Acid
N-ACETYL-SERINE
16
TGL
6
Ligand/Ion
TRISTEAROYLGLYCEROL
17
TPO
2
Mod. Amino Acid
PHOSPHOTHREONINE
18
ZN
2
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(102, 102)
Info
All Sites
001: AC1 (SOFTWARE)
002: AC2 (SOFTWARE)
003: AC3 (SOFTWARE)
004: AC4 (SOFTWARE)
005: AC5 (SOFTWARE)
006: AC6 (SOFTWARE)
007: AC7 (SOFTWARE)
008: AC8 (SOFTWARE)
009: AC9 (SOFTWARE)
010: AD1 (SOFTWARE)
011: AD2 (SOFTWARE)
012: AD3 (SOFTWARE)
013: AD4 (SOFTWARE)
014: AD5 (SOFTWARE)
015: AD6 (SOFTWARE)
016: AD7 (SOFTWARE)
017: AD8 (SOFTWARE)
018: AD9 (SOFTWARE)
019: AE1 (SOFTWARE)
020: AE2 (SOFTWARE)
021: AE3 (SOFTWARE)
022: AE4 (SOFTWARE)
023: AE5 (SOFTWARE)
024: AE6 (SOFTWARE)
025: AE7 (SOFTWARE)
026: AE8 (SOFTWARE)
027: AE9 (SOFTWARE)
028: AF1 (SOFTWARE)
029: AF2 (SOFTWARE)
030: AF3 (SOFTWARE)
031: AF4 (SOFTWARE)
032: AF5 (SOFTWARE)
033: AF6 (SOFTWARE)
034: AF7 (SOFTWARE)
035: AF8 (SOFTWARE)
036: AF9 (SOFTWARE)
037: AG1 (SOFTWARE)
038: AG2 (SOFTWARE)
039: AG3 (SOFTWARE)
040: AG4 (SOFTWARE)
041: AG5 (SOFTWARE)
042: AG6 (SOFTWARE)
043: AG7 (SOFTWARE)
044: AG8 (SOFTWARE)
045: AG9 (SOFTWARE)
046: AH1 (SOFTWARE)
047: AH2 (SOFTWARE)
048: AH3 (SOFTWARE)
049: AH4 (SOFTWARE)
050: AH5 (SOFTWARE)
051: AH6 (SOFTWARE)
052: AH7 (SOFTWARE)
053: AH8 (SOFTWARE)
054: AH9 (SOFTWARE)
055: AI1 (SOFTWARE)
056: AI2 (SOFTWARE)
057: AI3 (SOFTWARE)
058: AI4 (SOFTWARE)
059: AI5 (SOFTWARE)
060: AI6 (SOFTWARE)
061: AI7 (SOFTWARE)
062: AI8 (SOFTWARE)
063: AI9 (SOFTWARE)
064: AJ1 (SOFTWARE)
065: AJ2 (SOFTWARE)
066: AJ3 (SOFTWARE)
067: AJ4 (SOFTWARE)
068: AJ5 (SOFTWARE)
069: AJ6 (SOFTWARE)
070: AJ7 (SOFTWARE)
071: AJ8 (SOFTWARE)
072: AJ9 (SOFTWARE)
073: AK1 (SOFTWARE)
074: AK2 (SOFTWARE)
075: AK3 (SOFTWARE)
076: AK4 (SOFTWARE)
077: AK5 (SOFTWARE)
078: AK6 (SOFTWARE)
079: AK7 (SOFTWARE)
080: AK8 (SOFTWARE)
081: AK9 (SOFTWARE)
082: AL1 (SOFTWARE)
083: AL2 (SOFTWARE)
084: AL3 (SOFTWARE)
085: AL4 (SOFTWARE)
086: AL5 (SOFTWARE)
087: AL6 (SOFTWARE)
088: AL7 (SOFTWARE)
089: AL8 (SOFTWARE)
090: AL9 (SOFTWARE)
091: AM1 (SOFTWARE)
092: AM2 (SOFTWARE)
093: AM3 (SOFTWARE)
094: AM4 (SOFTWARE)
095: AM5 (SOFTWARE)
096: AM6 (SOFTWARE)
097: AM7 (SOFTWARE)
098: AM8 (SOFTWARE)
099: AM9 (SOFTWARE)
100: AN1 (SOFTWARE)
101: AN2 (SOFTWARE)
102: AN3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
001
AC1
SOFTWARE
ALA A:24 , GLY A:27 , MET A:28 , THR A:31 , SER A:34 , ILE A:37 , ARG A:38 , TYR A:54 , VAL A:58 , HIS A:61 , ALA A:62 , MET A:65 , ILE A:66 , VAL A:70 , ILE A:73 , GLY A:125 , TRP A:126 , TYR A:371 , PHE A:377 , HIS A:378 , SER A:382 , VAL A:386 , PHE A:393 , MET A:417 , PHE A:425 , GLN A:428 , ARG A:438 , ARG A:439 , TYR A:440 , VAL A:465 , MET A:468 , HOH A:706 , HOH A:732 , HOH A:738 , HOH A:745
binding site for residue HEA A 601
002
AC2
SOFTWARE
TRP A:126 , TRP A:236 , VAL A:243 , TYR A:244 , HIS A:290 , HIS A:291 , THR A:309 , ILE A:312 , THR A:316 , GLY A:317 , GLY A:352 , LEU A:353 , GLY A:355 , ILE A:356 , LEU A:358 , ALA A:359 , ASP A:364 , HIS A:368 , VAL A:373 , HIS A:376 , PHE A:377 , VAL A:380 , LEU A:381 , ARG A:438 , CMO A:606 , HOH A:740 , HOH A:753 , HOH A:804 , HOH A:817 , ILE B:34
binding site for residue HEA A 602
003
AC3
SOFTWARE
HIS A:240 , HIS A:290 , HIS A:291 , CMO A:606
binding site for residue CU A 603
004
AC4
SOFTWARE
HIS A:368 , ASP A:369 , GLU B:198 , HOH B:410 , HOH B:459 , HOH B:563
binding site for residue MG A 604
005
AC5
SOFTWARE
GLU A:40 , GLY A:45 , SER A:441 , HOH A:836
binding site for residue NA A 605
006
AC6
SOFTWARE
HIS A:240 , VAL A:243 , HIS A:291 , HEA A:602 , CU A:603
binding site for residue CMO A 606
007
AC7
SOFTWARE
ASN A:406 , THR A:408 , HOH A:705 , HOH A:727 , HOH A:905 , PHE K:9 , HIS K:10 , HOH K:225 , ALA M:16 , LEU M:19 , SER M:20 , HOH M:226
binding site for residue PGV A 607
008
AC8
SOFTWARE
PHE A:94 , PRO A:95 , ARG A:96 , MET A:97 , HOH A:802 , HIS C:9 , GLY C:20 , ALA C:24 , ASN C:50 , TRP C:57 , TRP C:58 , GLU C:64 , HIS C:71 , LEU C:79 , GLY C:82 , PEK C:302 , HOH C:455
binding site for residue PGV A 608
009
AC9
SOFTWARE
TYR A:260 , TYR A:261 , HIS A:395 , TRP A:494 , HOH A:731 , HOH A:757 , ILE M:1
binding site for residue EDO A 609
010
AD1
SOFTWARE
LEU A:483 , VAL A:485 , THR A:488 , TRP A:494 , CYS A:498 , HOH A:707 , HOH A:854
binding site for residue EDO A 610
011
AD2
SOFTWARE
TYR A:510 , HOH A:713 , HOH A:847 , PRO F:36 , LYS F:37 , THR F:39 , LEU F:48
binding site for residue EDO A 611
012
AD3
SOFTWARE
ARG A:5 , ASN A:11 , LYS A:13 , ASP A:14 , TRP A:81 , PRO A:500 , TYR A:502 , ASN L:10
binding site for residue EDO A 612
013
AD4
SOFTWARE
GLY A:269 , MET A:271 , GLY A:272 , HOH A:871 , GLN B:59 , HOH B:423
binding site for residue EDO A 613
014
AD5
SOFTWARE
HOH L:233
binding site for residue EDO A 614
015
AD6
SOFTWARE
TYR A:304 , CDL T:102
binding site for residue EDO A 615
016
AD7
SOFTWARE
PHE A:346 , TYR A:379 , ASN A:422 , PHE A:430 , LEU A:433 , LEU B:7 , LEU B:28 , VAL B:31 , PHE B:32 , SER B:35 , SER B:36 , LEU B:39 , HOH B:612
binding site for residue TGL B 301
017
AD8
SOFTWARE
HIS B:161 , CYS B:196 , GLU B:198 , CYS B:200 , HIS B:204 , MET B:207
binding site for residue CUA B 302
018
AD9
SOFTWARE
PHE A:321 , HIS A:328 , HOH A:846 , ILE B:41 , HIS B:52 , MET B:56 , ASP B:57 , VAL B:61 , TRP B:65 , HOH B:458 , HOH B:475 , ASP E:8 , LEU E:41 , HOH E:344 , HOH E:354 , ARG I:10 , HOH I:126
binding site for residue PSC B 303
019
AE1
SOFTWARE
MET A:271 , TRP A:275 , HOH A:871 , GLN B:59 , GLU B:62 , THR B:63 , HOH B:423 , HOH B:454 , PEK P:303 , EDO S:104 , ARG T:14 , ARG T:17 , PHE T:21 , GLY T:22
binding site for residue CHD B 304
020
AE2
SOFTWARE
TYR A:447 , HOH A:780 , ALA B:2 , GLN B:10 , LEU B:136 , PRO B:166 , TYR B:193 , HOH B:474
binding site for residue EDO B 305
021
AE3
SOFTWARE
HIS B:102 , GLU B:157 , ASP B:158 , HOH B:533
binding site for residue EDO B 306
022
AE4
SOFTWARE
GLU B:157 , HOH B:428 , HOH B:449 , HOH B:470 , EDO C:309
binding site for residue EDO B 307
023
AE5
SOFTWARE
TYR B:40 , ALA I:24
binding site for residue EDO B 308
024
AE6
SOFTWARE
HIS A:233 , ASP A:300 , THR A:301 , TYR A:304 , HOH A:720 , TRP C:99 , HIS C:103 , HOH C:469 , HOH C:488 , LEU P:127
binding site for residue CHD C 301
025
AE7
SOFTWARE
PGV A:608 , HOH A:959 , TRP C:34 , TYR C:181 , TYR C:182 , ALA C:184 , PHE C:186 , THR C:187 , ILE C:188 , PHE C:198 , GLY C:202 , DMU C:308 , TRP G:62 , THR G:68 , PHE G:69 , PHE G:70 , HIS G:71 , ASN G:76 , HOH G:239
binding site for residue PEK C 302
026
AE8
SOFTWARE
LYS C:157 , HIS C:158 , GLN C:161 , ALA F:1 , ARG G:17 , CDL G:101 , CHD G:102 , GLN O:59 , HOH O:470
binding site for residue PEK C 303
027
AE9
SOFTWARE
MET C:54 , TRP C:58 , VAL C:61 , SER C:65 , THR C:66 , HIS C:71 , LEU C:206 , HIS C:207 , ILE C:210 , PHE C:214 , ARG C:221 , HIS C:226 , PHE C:227 , THR C:228 , HIS C:231 , HIS C:232 , PHE C:233 , GLY C:234 , CDL C:306 , HOH C:415 , HOH C:427 , HOH C:490 , HOH C:554 , HOH F:240
binding site for residue PGV C 304
028
AF1
SOFTWARE
TRP C:99 , TYR C:102 , HIS C:103 , ALA C:107 , HOH C:406 , HOH C:407 , HOH C:479 , HOH C:507 , HOH C:557 , ASN H:24 , HOH H:134 , CDL T:102
binding site for residue PGV C 305
029
AF2
SOFTWARE
MET C:51 , TYR C:55 , TRP C:58 , ARG C:59 , ILE C:62 , ARG C:63 , PHE C:67 , THR C:213 , PHE C:220 , LYS C:224 , HIS C:226 , PGV C:304 , HOH C:474 , HOH C:511 , HOH C:513 , HOH C:559
binding site for residue CDL C 306
030
AF3
SOFTWARE
ARG C:156 , LEU C:160 , GLN C:161 , PHE C:219 , PHE J:1
binding site for residue CHD C 307
031
AF4
SOFTWARE
TRP C:34 , MET C:40 , PEK C:302 , HOH C:403 , HOH C:464 , SER G:61 , TRP G:62 , GLY G:63
binding site for residue DMU C 308
032
AF5
SOFTWARE
GLY B:177 , EDO B:307 , HOH B:449 , GLU C:111 , EDO C:312 , HOH C:401 , HOH H:138
binding site for residue EDO C 309
033
AF6
SOFTWARE
TRP C:146 , SER C:150 , HIS C:158 , HOH C:426 , ALA F:1 , ARG G:17
binding site for residue EDO C 310
034
AF7
SOFTWARE
GLY B:177 , GLU C:111 , EDO C:309 , HOH C:401 , TRP H:68 , TRP H:72 , HOH H:132
binding site for residue EDO C 312
035
AF8
SOFTWARE
TRP A:334 , LEU A:342 , GLY A:343 , VAL A:419 , HOH A:708 , LEU B:39 , THR B:47 , HOH B:556 , HOH B:572 , HOH B:601 , ARG D:73 , TRP D:78 , EDO D:203 , HOH D:301 , HOH D:385 , ARG I:16 , HOH K:243
binding site for residue TGL D 201
036
AF9
SOFTWARE
LYS D:63 , ARG E:30
binding site for residue EDO D 202
037
AG1
SOFTWARE
TRP A:334 , TGL D:201 , HOH D:411 , HOH D:444
binding site for residue EDO D 203
038
AG2
SOFTWARE
TYR E:18 , LYS E:21 , GLU E:28 , HOH E:306
binding site for residue EDO E 201
039
AG3
SOFTWARE
HOH B:414 , PRO E:77 , HIS E:78 , HOH E:305 , HOH E:326 , HOH E:342
binding site for residue EDO E 202
040
AG4
SOFTWARE
ARG E:53 , ARG E:57 , HOH E:389
binding site for residue EDO E 203
041
AG5
SOFTWARE
CYS F:60 , CYS F:62 , CYS F:82 , CYS F:85
binding site for residue ZN F 101
042
AG6
SOFTWARE
THR A:490 , SER F:67 , THR F:68 , VAL F:69 , TRP F:71 , HOH F:227 , HOH F:244 , HOH F:273
binding site for residue EDO F 102
043
AG7
SOFTWARE
HIS C:231 , ASP F:9 , GLU F:17 , HOH F:213 , HOH F:234
binding site for residue EDO F 103
044
AG8
SOFTWARE
ASN C:125 , LEU C:127 , LEU C:131 , PEK C:303 , SER G:27 , LEU G:30 , CYS G:31 , ASN G:34 , LEU G:37 , HIS G:38 , PEK G:103 , HOH G:222 , PHE N:282 , ILE N:286 , ASP N:300 , SER N:307 , ILE N:311 , ALA O:77 , LEU O:78 , LEU O:81 , TYR O:85 , HOH O:530
binding site for residue CDL G 101
045
AG9
SOFTWARE
PEK C:303 , ARG G:14 , ARG G:17 , PHE G:21 , GLY G:22 , HOH G:203 , HOH G:204 , HOH G:211 , HOH G:229 , MET N:271 , TRP N:275 , GLU O:62 , THR O:63
binding site for residue CHD G 102
046
AH1
SOFTWARE
SER G:2 , ALA G:3 , HIS G:8 , CDL G:101 , PGV G:104 , HOH G:219 , TYR P:81 , ILE P:84 , THR P:95 , PHE P:98 , TRP P:240 , VAL P:247 , PHE P:251
binding site for residue PEK G 103
047
AH2
SOFTWARE
ALA G:1 , PEK G:103 , HOH G:201 , HOH G:206 , HOH G:212 , HOH G:218 , HOH G:286 , ASP N:298 , THR P:95 , TRP P:99 , HIS P:103 , ALA P:107 , CHD P:301 , HOH P:543 , ASN U:22
binding site for residue PGV G 104
048
AH3
SOFTWARE
GLY C:120 , ALA G:46 , PHE G:47 , ILE G:48 , LEU G:53 , ARG G:54 , HOH G:225
binding site for residue EDO G 105
049
AH4
SOFTWARE
LEU A:7 , TYR J:32 , ARG J:33 , THR J:37 , LEU J:40
binding site for residue CHD J 101
050
AH5
SOFTWARE
THR A:17 , LEU A:18 , TRP A:25 , PHE A:400 , ILE L:11 , PRO L:12 , PHE L:13 , SER L:14 , ARG L:20 , MET L:24 , PHE L:28 , PHE L:29 , SER L:31 , HOH L:238 , HOH L:241 , HOH L:245
binding site for residue TGL L 101
051
AH6
SOFTWARE
TRP D:98 , LEU M:27 , LEU M:28 , GLY M:31 , TRP M:32 , TYR M:35 , HIS M:36 , HOH M:201
binding site for residue DMU M 101
052
AH7
SOFTWARE
ARG L:41 , TRP M:32 , HIS M:36 , TYR M:40 , HOH M:228
binding site for residue EDO M 102
053
AH8
SOFTWARE
GLY N:27 , MET N:28 , THR N:31 , SER N:34 , ILE N:37 , ARG N:38 , TYR N:54 , VAL N:58 , HIS N:61 , ALA N:62 , MET N:65 , ILE N:66 , MET N:69 , VAL N:70 , ILE N:73 , GLY N:125 , TRP N:126 , TYR N:371 , PHE N:377 , HIS N:378 , SER N:382 , VAL N:386 , PHE N:393 , PHE N:425 , GLN N:428 , ARG N:438 , ARG N:439 , SER N:461 , VAL N:465 , MET N:468 , HOH N:713 , HOH N:731 , HOH N:736 , HOH N:820
binding site for residue HEA N 601
054
AH9
SOFTWARE
TRP N:126 , TRP N:236 , VAL N:243 , TYR N:244 , HIS N:290 , HIS N:291 , THR N:309 , ILE N:312 , ALA N:313 , THR N:316 , GLY N:317 , THR N:349 , GLY N:352 , LEU N:353 , GLY N:355 , ILE N:356 , LEU N:358 , ALA N:359 , ASP N:364 , HIS N:368 , VAL N:373 , HIS N:376 , PHE N:377 , VAL N:380 , LEU N:381 , ARG N:438 , CMO N:606 , HOH N:718 , HOH N:735 , HOH N:743 , HOH N:768 , ILE O:34
binding site for residue HEA N 602
055
AI1
SOFTWARE
HIS N:240 , HIS N:290 , HIS N:291 , CMO N:606
binding site for residue CU N 603
056
AI2
SOFTWARE
HIS N:368 , ASP N:369 , GLU O:198 , HOH O:406 , HOH O:466 , HOH O:550
binding site for residue MG N 604
057
AI3
SOFTWARE
GLU N:40 , GLY N:45 , SER N:441 , HOH N:870
binding site for residue NA N 605
058
AI4
SOFTWARE
HIS N:240 , VAL N:243 , HIS N:291 , HEA N:602 , CU N:603
binding site for residue CMO N 606
059
AI5
SOFTWARE
TYR N:379 , ASN N:422 , PHE N:426 , HIS N:429 , LEU N:433 , LEU O:7 , GLY O:8 , LEU O:28 , PHE O:32 , HOH O:592 , ARG V:43
binding site for residue TGL N 607
060
AI6
SOFTWARE
ASN N:406 , THR N:408 , TRP N:409 , ILE N:412 , HOH N:707 , HOH N:811 , HOH N:856 , PHE Q:87 , PHE X:9 , HIS X:10 , HOH X:216 , GLN Z:15 , LEU Z:19 , SER Z:20 , HOH Z:218
binding site for residue PGV N 608
061
AI7
SOFTWARE
PHE N:94 , PRO N:95 , ARG N:96 , MET N:97 , HOH N:766 , HIS P:9 , GLY P:20 , THR P:28 , ASN P:50 , TRP P:57 , TRP P:58 , VAL P:61 , GLU P:64 , HIS P:71 , LEU P:79 , GLY P:82 , PEK P:302 , HOH P:454
binding site for residue PGV N 609
062
AI8
SOFTWARE
TYR N:260 , TYR N:261 , HIS N:395 , TRP N:494 , HOH N:739 , HOH N:780
binding site for residue EDO N 610
063
AI9
SOFTWARE
HIS N:256 , LYS N:265 , THR N:490 , ASN N:491 , HOH N:764 , HOH N:846 , HOH N:871 , HOH N:873 , EDO S:102
binding site for residue EDO N 611
064
AJ1
SOFTWARE
THR N:484 , VAL N:485 , ASP N:486 , HOH N:705 , ILE Z:1 , THR Z:2
binding site for residue EDO N 612
065
AJ2
SOFTWARE
LEU N:483 , THR N:484 , VAL N:485 , TRP N:494 , GLY N:497 , CYS N:498 , HOH N:875 , TYR Q:11 , HOH Q:348
binding site for residue EDO N 613
066
AJ3
SOFTWARE
MET N:71 , ILE N:75 , GLY N:76 , SER N:157 , EDO N:616 , HOH N:709 , HOH N:722 , HOH N:775
binding site for residue EDO N 615
067
AJ4
SOFTWARE
TYR N:19 , ASN N:80 , ASN N:98 , GLY N:160 , PHE N:164 , EDO N:615 , HOH N:709 , HOH N:722
binding site for residue EDO N 616
068
AJ5
SOFTWARE
ASN N:496 , THR N:504 , PHE N:505 , GLU N:507 , HOH N:706 , HOH N:782 , HOH N:866 , HOH N:915 , TRP S:73
binding site for residue EDO N 617
069
AJ6
SOFTWARE
HIS O:161 , CYS O:196 , GLU O:198 , CYS O:200 , HIS O:204 , MET O:207
binding site for residue CUA O 301
070
AJ7
SOFTWARE
PHE N:321 , HIS N:328 , ILE O:41 , HIS O:52 , MET O:56 , ASP O:57 , TRP O:65 , GLU R:6 , THR R:7 , ASP R:8 , ARG V:10 , HOH V:256
binding site for residue PSC O 302
071
AJ8
SOFTWARE
TYR N:447 , ALA O:2 , GLN O:10 , LEU O:136 , PRO O:166 , TYR O:193 , HOH O:440 , HOH O:505
binding site for residue EDO O 303
072
AJ9
SOFTWARE
GLU O:157 , HOH O:432 , HOH O:436 , EDO P:307
binding site for residue EDO O 304
073
AK1
SOFTWARE
PGV G:104 , HIS N:233 , ASP N:300 , THR N:301 , TYR N:304 , HOH N:744 , TRP P:99 , HIS P:103 , HOH P:484
binding site for residue CHD P 301
074
AK2
SOFTWARE
HIS N:151 , PGV N:609 , TRP P:34 , TYR P:181 , TYR P:182 , ALA P:184 , PHE P:186 , THR P:187 , ILE P:188 , PHE P:198 , HOH P:404 , HOH P:545 , TRP T:62 , THR T:68 , PHE T:69 , PHE T:70 , HIS T:71 , ASN T:76 , HOH T:232
binding site for residue PEK P 302
075
AK3
SOFTWARE
ILE B:67 , CHD B:304 , LYS P:157 , HIS P:158 , GLN P:161 , THR P:168 , TYR P:172 , HOH P:431 , HOH P:530 , ALA S:1 , EDO S:104 , ARG T:17 , PHE T:21 , TRP T:36 , CDL T:102
binding site for residue PEK P 303
076
AK4
SOFTWARE
TRP P:58 , VAL P:61 , SER P:65 , THR P:66 , HIS P:71 , HIS P:207 , ILE P:210 , PHE P:214 , ARG P:221 , HIS P:226 , PHE P:227 , THR P:228 , HIS P:231 , HIS P:232 , PHE P:233 , GLY P:234 , CDL P:305 , HOH P:422 , HOH P:424 , HOH P:492 , HOH S:229
binding site for residue PGV P 304
077
AK5
SOFTWARE
MET P:51 , TYR P:55 , ARG P:59 , ILE P:62 , ARG P:63 , PHE P:67 , THR P:213 , PHE P:220 , LYS P:224 , HIS P:226 , PGV P:304 , HOH P:457 , HOH P:509 , HOH P:525 , HOH P:542 , LYS W:8
binding site for residue CDL P 305
078
AK6
SOFTWARE
ARG P:156 , LYS P:157 , LEU P:160 , GLN P:161 , PHE P:219 , LEU P:223
binding site for residue CHD P 306
079
AK7
SOFTWARE
GLY O:177 , EDO O:304 , HOH O:436 , GLU P:111 , HOH P:417 , HOH P:456 , HOH P:465
binding site for residue EDO P 307
080
AK8
SOFTWARE
CHD W:101
binding site for residue EDO P 308
081
AK9
SOFTWARE
HIS P:243
binding site for residue EDO P 309
082
AL1
SOFTWARE
TRP N:334 , MET N:339 , LEU N:342 , ALA N:415 , HOH N:714 , LEU O:39 , ILE O:42 , THR O:47 , HOH O:538 , ARG Q:73 , SER Q:74 , GLU Q:77 , TRP Q:78 , HOH Q:334 , HOH Q:335 , HOH Q:402 , ARG V:16 , EDO V:101
binding site for residue TGL Q 201
083
AL2
SOFTWARE
ARG R:14 , TYR R:18
binding site for residue EDO R 201
084
AL3
SOFTWARE
TYR R:18 , LYS R:21 , GLU R:28 , HOH R:301
binding site for residue EDO R 202
085
AL4
SOFTWARE
CYS S:60 , CYS S:62 , CYS S:82 , CYS S:85
binding site for residue ZN S 101
086
AL5
SOFTWARE
THR N:490 , EDO N:611 , SER S:67 , VAL S:69 , TRP S:71 , HOH S:234 , HOH S:241 , HOH S:249
binding site for residue EDO S 102
087
AL6
SOFTWARE
HIS P:231 , HOH P:496 , ASP S:9 , GLU S:17 , HOH S:211 , HOH S:248
binding site for residue EDO S 103
088
AL7
SOFTWARE
CHD B:304 , ASP F:65 , PEK P:303 , ALA S:1
binding site for residue EDO S 104
089
AL8
SOFTWARE
THR C:95 , PHE C:98 , VAL C:247 , SER T:2 , ALA T:3 , LYS T:5 , GLY T:6 , ASP T:7 , HIS T:8 , CDL T:102 , HOH T:249
binding site for residue PEK T 101
090
AL9
SOFTWARE
ASP A:300 , TYR A:304 , SER A:307 , ILE A:311 , EDO A:615 , HOH A:890 , ALA B:70 , ALA B:77 , LEU B:78 , LEU B:81 , TYR B:85 , HOH B:520 , PGV C:305 , ASN P:125 , LEU P:127 , LEU P:131 , VAL P:142 , PEK P:303 , SER T:27 , LEU T:30 , CYS T:31 , ASN T:34 , LEU T:37 , HIS T:38 , PEK T:101 , HOH T:260
binding site for residue CDL T 102
091
AM1
SOFTWARE
HOH P:545 , TRP T:62 , GLY T:63 , HOH T:207 , HOH T:236
binding site for residue DMU T 103
092
AM2
SOFTWARE
GLY P:120 , ALA T:46 , PHE T:47 , ILE T:48 , LEU T:53 , ARG T:54 , HOH T:222
binding site for residue EDO T 104
093
AM3
SOFTWARE
TGL Q:201 , ARG V:16 , HIS V:20 , HOH V:201 , HOH V:214
binding site for residue EDO V 101
094
AM4
SOFTWARE
ILE N:3 , EDO P:308 , TYR W:32 , ARG W:33 , THR W:37 , LEU W:40 , HOH W:243
binding site for residue CHD W 101
095
AM5
SOFTWARE
LEU N:110 , SER P:29 , SER W:46 , HOH W:201
binding site for residue EDO W 102
096
AM6
SOFTWARE
MET N:423
binding site for residue EDO X 101
097
AM7
SOFTWARE
THR N:17 , LEU N:18 , PHE N:22 , TRP N:25 , TRP N:81 , LEU N:113 , PHE N:400 , ILE Y:11 , PRO Y:12 , PHE Y:13 , SER Y:14 , ARG Y:20 , MET Y:24 , MET Y:25 , PHE Y:28 , PHE Y:29 , HOH Y:228 , HOH Y:234
binding site for residue TGL Y 101
098
AM8
SOFTWARE
TRP Q:98 , LEU Z:27 , LEU Z:28 , GLY Z:31 , TRP Z:32 , TYR Z:35 , HIS Z:36 , HOH Z:206
binding site for residue DMU Z 101
099
AM9
SOFTWARE
ILE N:3 , ASN N:4 , ARG N:5 , TRP N:6 , HOH N:807 , HOH N:913 , HOH N:921 , TYR Y:3 , PRO Y:12
binding site for Di-peptide FME N 1 and PHE N 2
100
AN1
SOFTWARE
TRP N:236 , PHE N:238 , GLY N:239 , PRO N:241 , GLU N:242 , VAL N:243 , ILE N:245 , LEU N:246 , ILE N:247 , LEU N:248 , ILE N:280 , GLY N:284 , VAL N:287 , HIS N:290 , HIS N:291 , ILE N:312 , HEA N:602 , CU N:603 , CMO N:606
binding site for Di-peptide HIS N 240 and TYR N 244
101
AN2
SOFTWARE
SER N:434 , ALA N:446 , TYR N:447 , TYR O:3 , GLN O:6 , GLN O:10 , LEU O:133 , TYR O:193 , EDO O:303 , HOH O:505 , HOH O:547
binding site for Di-peptide FME O 1 and ALA O 2
102
AN3
SOFTWARE
HOH R:386 , ALA V:3 , LEU V:4 , HOH V:217 , HOH V:234 , HOH V:239
binding site for Di-peptide SAC V 1 and THR V 2
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(11, 22)
Info
All Exons
Exon 1.2 (I:1-36 | V:1-36)
Exon 1.3 (I:37-73 | V:37-73)
Exon 2.2 (J:1-13 | W:1-13)
Exon 2.3 (J:14-42 | W:14-42)
Exon 2.4 (J:42-58 | W:42-58)
Exon 3.2 (E:5-32 | R:5-32)
Exon 3.3 (E:32-72 | R:32-72)
Exon 3.4 (E:73-109 | R:73-109)
Exon 4.1 (G:1-13 | T:1-13)
Exon 4.2 (G:13-58 | T:13-58)
Exon 4.3 (G:59-84 | T:59-84)
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All Exon Boundaries
01: Boundary 1.1/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 2.1/2.2
05: Boundary 2.2/2.3
06: Boundary 2.3/2.4
07: Boundary 2.4/-
08: Boundary 3.1/3.2
09: Boundary 3.2/3.3
10: Boundary 3.3/3.4
11: Boundary 3.4/3.5
12: Boundary -/4.1
13: Boundary 4.1/4.2
14: Boundary 4.2/4.3
15: Boundary 4.3/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000018778
1
ENSBTAE00000392730
chr14:
62538824-62538908
85
COX6C_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000018778
2
ENSBTAE00000152930
chr14:
62539837-62539968
132
COX6C_BOVIN
1-37
37
2
I:1-36
V:1-36
36
36
1.3
ENSBTAT00000018778
3
ENSBTAE00000152932
chr14:
62540912-62541039
128
COX6C_BOVIN
38-74
37
2
I:37-73
V:37-73
37
37
1.4
ENSBTAT00000018778
4
ENSBTAE00000382779
chr14:
62548625-62548744
120
COX6C_BOVIN
-
0
0
-
-
2.1
ENSBTAT00000019808
1
ENSBTAE00000161251
chr18:
46232862-46232802
61
CX7A1_BOVIN
1-5
5
0
-
-
2.2
ENSBTAT00000019808
2
ENSBTAE00000161252
chr18:
46232104-46232018
87
CX7A1_BOVIN
6-34
29
2
J:1-13
W:1-13
13
13
2.3
ENSBTAT00000019808
3
ENSBTAE00000161253
chr18:
46231883-46231799
85
CX7A1_BOVIN
35-63
29
2
J:14-42
W:14-42
29
29
2.4
ENSBTAT00000019808
4
ENSBTAE00000161254
chr18:
46231418-46231281
138
CX7A1_BOVIN
63-80
18
2
J:42-58
W:42-58
17
17
3.1
ENSBTAT00000022949
1
ENSBTAE00000344359
chr21:
33835267-33835426
160
COX5A_BOVIN
1-36
36
0
-
-
3.2
ENSBTAT00000022949
2
ENSBTAE00000187373
chr21:
33840320-33840436
117
COX5A_BOVIN
36-75
40
2
E:5-32
R:5-32
28
28
3.3
ENSBTAT00000022949
3
ENSBTAE00000187374
chr21:
33842603-33842724
122
COX5A_BOVIN
75-115
41
2
E:32-72
R:32-72
41
41
3.4
ENSBTAT00000022949
4
ENSBTAE00000187376
chr21:
33843979-33844143
165
COX5A_BOVIN
116-152
37
2
E:73-109
R:73-109
37
37
3.5
ENSBTAT00000022949
5
ENSBTAE00000187379
chr21:
33846054-33846214
161
COX5A_BOVIN
-
0
0
-
-
4.1
ENSBTAT00000026002
1
ENSBTAE00000425992
chr25:
29305227-29305113
115
CX6A2_BOVIN
1-25
25
2
G:1-13
T:1-13
13
13
4.2
ENSBTAT00000026002
2
ENSBTAE00000211646
chr25:
29304966-29304830
137
CX6A2_BOVIN
25-70
46
2
G:13-58
T:13-58
46
46
4.3
ENSBTAT00000026002
3
ENSBTAE00000211652
chr25:
29304732-29304604
129
CX6A2_BOVIN
71-97
27
2
G:59-84
T:59-84
26
26
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SCOP Domains
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CATH Domains
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Pfam Domains
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