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4ZRV
Biol. Unit 2
Info
Asym.Unit (84 KB)
Biol.Unit 1 (29 KB)
Biol.Unit 2 (28 KB)
Biol.Unit 3 (28 KB)
Biol.Unit 4 (77 KB)
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(1)
Title
:
STRUCTURE OF COW MINCLE CRD COMPLEXED WITH TREHALOSE MONO BUTYRATE
Authors
:
H. Feinberg, N. D. S. Rambaruth, M. E. Taylor, K. Drickamer, W. I. Weis
Date
:
12 May 15 (Deposition) - 25 May 16 (Release) - 19 Oct 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: A,B,C (1x)
Keywords
:
Glycobiology, Carbohydrate-Binding Protein, C-Type Lectin, Complex, Sugar Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Feinberg, N. D. Rambaruth, S. A. Jegouzo, K. M. Jacobsen, R. Djurhuus, T. B. Poulsen, W. I. Weis, M. E. Taylor, K. Drickamer
Binding Sites For Acylated Trehalose Analogs Of Glycolipid Ligands On An Extended Carbohydrate Recognition Domain Of The Macrophage Receptor Mincle.
J. Biol. Chem. V. 291 21222 2016
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: TREHALOSE MONO-BUTYRATE (4RSa)
1b: TREHALOSE MONO-BUTYRATE (4RSb)
1c: TREHALOSE MONO-BUTYRATE (4RSc)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
3a: CALCIUM ION (CAa)
3b: CALCIUM ION (CAb)
3c: CALCIUM ION (CAc)
3d: CALCIUM ION (CAd)
3e: CALCIUM ION (CAe)
3f: CALCIUM ION (CAf)
3g: CALCIUM ION (CAg)
3h: CALCIUM ION (CAh)
3i: CALCIUM ION (CAi)
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No.
Name
Count
Type
Full Name
1
4RS
1
Ligand/Ion
TREHALOSE MONO-BUTYRATE
2
ACT
-1
Ligand/Ion
ACETATE ION
3
CA
-1
Ligand/Ion
CALCIUM ION
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Sites
(7, 7)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
5: AC9 (SOFTWARE)
6: AD1 (SOFTWARE)
7: AD2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
ASP A:142 , GLU A:146 , ASP A:177 , HOH A:402 , HOH A:405 , HOH A:409 , HOH A:414 , ASP B:142 , GLU B:146 , THR B:174 , ASP B:177 , HOH B:401 , HOH B:446
binding site for residue ACT A 305
2
AC6
SOFTWARE
GLU B:168 , ASN B:170 , LEU B:172 , GLU B:176 , ASN B:192 , ASP B:193 , CA B:302 , HOH B:404 , HOH B:406 , HOH B:411 , PHE C:197 , PHE C:198 , ASN C:199 , ACT C:301
binding site for residue 4RS B 301
3
AC7
SOFTWARE
GLU B:168 , ASN B:170 , GLU B:176 , ASN B:192 , ASP B:193 , 4RS B:301
binding site for residue CA B 302
4
AC8
SOFTWARE
VAL B:116 , ASN B:118 , GLU B:122 , GLU B:205 , HOH B:484 , HOH B:492
binding site for residue CA B 303
5
AC9
SOFTWARE
ASP B:142 , GLU B:146 , ASN B:171 , GLU B:176 , ASP B:177 , HOH B:433
binding site for residue CA B 304
6
AD1
SOFTWARE
4RS B:301 , ASN C:199
binding site for residue ACT C 301
7
AD2
SOFTWARE
VAL A:173 , PHE B:197 , PHE B:198 , GLU C:135 , GLU C:168 , ASN C:170 , GLU C:176 , ARG C:182 , ASN C:192 , ASP C:193 , PHE C:198 , CA C:303 , HOH C:403 , HOH C:431
binding site for residue 4RS C 302
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SAPs(SNPs)/Variants
(0, 0)
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SCOP Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (84 KB)
Header - Asym.Unit
Biol.Unit 1 (29 KB)
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Biol.Unit 2 (28 KB)
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Biol.Unit 3 (28 KB)
Header - Biol.Unit 3
Biol.Unit 4 (77 KB)
Header - Biol.Unit 4
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