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4YEE
Asym. Unit
Info
Asym.Unit (586 KB)
Biol.Unit 1 (38 KB)
Biol.Unit 10 (38 KB)
Biol.Unit 11 (37 KB)
Biol.Unit 12 (38 KB)
Biol.Unit 13 (39 KB)
Biol.Unit 14 (39 KB)
Biol.Unit 15 (39 KB)
Biol.Unit 16 (39 KB)
Biol.Unit 17 (38 KB)
Biol.Unit 18 (38 KB)
Biol.Unit 2 (39 KB)
Biol.Unit 3 (38 KB)
Biol.Unit 4 (37 KB)
Biol.Unit 5 (40 KB)
Biol.Unit 6 (39 KB)
Biol.Unit 7 (39 KB)
Biol.Unit 8 (39 KB)
Biol.Unit 9 (39 KB)
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Title
:
BETA2 CARBOHYDRATE BINDING MODULE (CBM) OF AMP-ACTIVATED PROTEIN KINASE (AMPK) IN COMPLEX WITH GLUCOSYL-BETA-CYCLODEXTRIN
Authors
:
J. Mobbs, M. A. Gorman, M. W. Parker, P. R. Gooley, M. Griffin
Date
:
24 Feb 15 (Deposition) - 01 Apr 15 (Release) - 03 Jun 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: J (1x)
Biol. Unit 11: K (1x)
Biol. Unit 12: L (1x)
Biol. Unit 13: M (1x)
Biol. Unit 14: N (1x)
Biol. Unit 15: O (1x)
Biol. Unit 16: P (1x)
Biol. Unit 17: Q (1x)
Biol. Unit 18: R (1x)
Keywords
:
Carbohydrate Binding Module (Cbm), Amp-Activated Protein Kinase (Ampk), Glycogen, Sugar Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. I. Mobbs, A. Koay, A. Di Paolo, M. Bieri, E. J. Petrie, M. A. Gorman, L. Doughty, M. W. Parker, D. I. Stapleton, M. D. Griffin, P. R. Gooley
Determinants Of Oligosaccharide Specificity Of The Carbohydrate-Binding Modules Of Amp-Activated Protein Kinase.
Biochem. J. V. 468 245 2015
[
close entry info
]
Hetero Components
(2, 37)
Info
All Hetero Components
1a: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQa)
1b: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQb)
1c: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQc)
1d: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQd)
1e: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQe)
1f: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQf)
1g: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQg)
1h: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQh)
1i: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQi)
1j: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQj)
1k: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQk)
1l: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQl)
1m: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQm)
1n: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQn)
1o: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQo)
1p: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQp)
1q: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQq)
1r: 6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEX... (4CQr)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
4CQ
18
Ligand/Ion
6-O-ALPHA-D-GLUCOSYL-BETA-CYCLODEXTRIN
2
GOL
19
Ligand/Ion
GLYCEROL
[
close Hetero Component info
]
Sites
(37, 37)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:103 , PRO A:104 , ALA A:114 , ILE A:115 , LEU A:116 , HOH A:340 , HOH A:351 , HOH A:415 , ILE C:115
binding site for residue GOL A 201
02
AC2
SOFTWARE
GLU A:89 , VAL A:90 , PHE A:91 , LEU A:105 , HOH A:345 , HOH A:346 , HOH A:381 , THR G:101 , LYS G:102
binding site for residue GOL A 202
03
AC3
SOFTWARE
SER A:93 , TRP A:99 , LYS A:102 , LYS A:126 , TRP A:133 , SER A:144 , GLN A:145 , THR A:148 , ASN A:150 , HOH A:304 , HOH A:305 , HOH A:308 , HOH A:341 , HOH A:349 , HOH A:353 , HOH A:356 , HOH A:361 , HOH A:422 , ASN F:98 , 4CQ F:202 , HOH F:301 , LYS G:88 , GLU G:89 , HOH G:340 , GLU L:120
binding site for residue 4CQ A 203
04
AC4
SOFTWARE
GLU B:89 , PHE B:91 , PHE B:128 , VAL B:129 , ASP B:130 , GLY B:131 , HOH B:313 , HOH B:386 , PHE F:91 , LYS F:102 , PHE F:128
binding site for residue GOL B 201
05
AC5
SOFTWARE
PRO B:104 , ILE B:115 , LEU B:116 , HOH B:301 , HOH B:315 , HOH B:399 , HOH B:400 , ILE L:115
binding site for residue GOL B 202
06
AC6
SOFTWARE
SER B:93 , TRP B:99 , LYS B:102 , LYS B:126 , TRP B:133 , SER B:144 , GLN B:145 , THR B:148 , ASN B:150 , HOH B:340 , HOH B:348 , HOH B:349 , HOH B:354 , HOH B:361 , HOH B:362 , HOH B:363 , 4CQ E:202 , HOH E:327 , LYS F:88 , GLU F:89 , HOH F:366 , HOH F:384
binding site for residue 4CQ B 203
07
AC7
SOFTWARE
HOH A:383 , VAL C:80 , ILE C:81 , ARG C:82 , TYR C:125 , HOH C:324 , HOH C:326 , HOH C:410
binding site for residue GOL C 201
08
AC8
SOFTWARE
ILE A:115 , HOH A:340 , ILE C:103 , PRO C:104 , ALA C:114 , ILE C:115 , HOH C:362 , HOH C:403
binding site for residue GOL C 202
09
AC9
SOFTWARE
SER C:93 , TRP C:99 , LYS C:102 , LYS C:126 , TRP C:133 , SER C:144 , GLN C:145 , THR C:148 , ASN C:150 , HOH C:301 , HOH C:319 , HOH C:340 , HOH C:343 , HOH C:344 , HOH C:353 , HOH C:358 , HOH C:363 , HOH C:370 , HOH C:373 , HOH C:392 , HOH C:393 , HOH C:400 , LYS E:88 , GLU E:89 , HOH E:329 , 4CQ F:202
binding site for residue 4CQ C 203
10
AD1
SOFTWARE
ILE D:103 , PRO D:104 , ALA D:114 , ILE D:115 , LEU D:116 , HOH D:351 , HOH D:354 , HOH D:388 , HOH D:399 , ILE K:115
binding site for residue GOL D 201
11
AD2
SOFTWARE
SER D:93 , TRP D:99 , LYS D:102 , LYS D:126 , TRP D:133 , SER D:144 , GLN D:145 , LEU D:146 , THR D:148 , ASN D:150 , HOH D:344 , HOH D:349 , HOH D:360 , HOH D:367 , HOH D:371 , HOH D:381 , HOH D:386 , HOH D:390 , HOH D:396 , GLU H:120 , HOH H:305 , HOH H:306 , HOH H:307 , LYS N:88 , GLU N:89
binding site for residue 4CQ D 202
12
AD3
SOFTWARE
VAL E:80 , ILE E:81 , ARG E:82 , GLU E:139 , HOH E:303 , HIS I:109 , HOH I:350
binding site for residue GOL E 201
13
AD4
SOFTWARE
GLN B:132 , 4CQ B:203 , SER E:93 , TRP E:99 , LYS E:102 , LYS E:126 , TRP E:133 , SER E:144 , GLN E:145 , LEU E:146 , THR E:148 , ASN E:150 , HOH E:327 , HOH E:332 , HOH E:335 , HOH E:344 , HOH E:353 , HOH E:358 , HOH E:360 , HOH E:366 , HOH E:367 , HOH E:375 , HOH E:386 , HOH E:392 , 4CQ N:203
binding site for residue 4CQ E 202
14
AD5
SOFTWARE
ILE F:81 , ARG F:82 , GLU F:139 , HOH F:324 , HIS J:109
binding site for residue GOL F 201
15
AD6
SOFTWARE
4CQ A:203 , LYS B:88 , GLN C:132 , 4CQ C:203 , HOH C:344 , HOH C:392 , TRP F:99 , LYS F:126 , TRP F:133 , SER F:144 , GLN F:145 , LEU F:146 , THR F:148 , ASN F:150 , HOH F:301 , HOH F:306 , HOH F:308 , HOH F:314 , HOH F:325 , HOH F:344 , HOH F:350 , HOH F:355 , HOH F:364 , HOH F:368 , HOH F:377 , HOH F:378 , HOH F:380 , HOH F:388 , HOH F:390 , HOH F:391 , HOH F:393
binding site for residue 4CQ F 202
16
AD7
SOFTWARE
GLU A:89 , HOH A:381 , TRP G:99 , LYS G:102 , LYS G:126 , TRP G:133 , SER G:144 , GLN G:145 , THR G:148 , ASN G:150 , HOH G:331 , HOH G:336 , HOH G:342 , HOH G:351 , HOH G:356 , HOH G:359 , HOH G:384 , HOH G:385 , GLU N:120
binding site for residue 4CQ G 201
17
AD8
SOFTWARE
VAL H:80 , ARG H:82 , TYR H:125 , PHE H:127 , ASP H:136 , GLU H:139 , HOH H:312 , HIS P:109 , HOH P:319
binding site for residue GOL H 201
18
AD9
SOFTWARE
LYS H:88 , GLU H:89 , ASP H:130 , GLY L:131 , TRP L:133
binding site for residue GOL H 202
19
AE1
SOFTWARE
GLU G:120 , SER H:93 , TRP H:99 , THR H:101 , LYS H:102 , LYS H:126 , TRP H:133 , SER H:144 , GLN H:145 , THR H:148 , ASN H:150 , HOH H:304 , HOH H:341 , HOH H:343 , HOH H:386 , GLU L:89
binding site for residue 4CQ H 203
20
AE2
SOFTWARE
HIS E:109 , HOH E:384 , VAL I:80 , ILE I:81 , ARG I:82 , GLU I:139 , HOH I:342
binding site for residue GOL I 201
21
AE3
SOFTWARE
ILE E:115 , ILE I:103 , PRO I:104 , ILE I:106 , ALA I:114 , ILE I:115 , HOH I:315 , HOH I:317 , HOH I:345 , HOH I:377
binding site for residue GOL I 202
22
AE4
SOFTWARE
SER I:93 , TRP I:99 , LYS I:102 , LYS I:126 , TRP I:133 , SER I:144 , GLN I:145 , LEU I:146 , THR I:148 , ASN I:150 , HOH I:335 , HOH I:340 , HOH I:344 , GLY P:131 , GLN P:132
binding site for residue 4CQ I 203
23
AE5
SOFTWARE
TRP J:99 , LYS J:102 , LYS J:126 , TRP J:133 , SER J:144 , GLN J:145 , LEU J:146 , THR J:148 , ASN J:150 , HOH J:345 , HOH J:346 , HOH J:349 , HOH J:352 , HOH J:377 , GLN M:132 , HOH M:302
binding site for residue 4CQ J 201
24
AE6
SOFTWARE
GLU K:89 , VAL K:90 , PHE K:91 , PRO K:104 , LEU K:105 , HOH K:309 , HOH K:310 , HOH K:343 , THR R:101 , HOH R:309
binding site for residue GOL K 201
25
AE7
SOFTWARE
SER K:93 , TRP K:99 , LYS K:102 , LYS K:126 , TRP K:133 , SER K:144 , GLN K:145 , LEU K:146 , THR K:148 , ASN K:150 , HOH K:311 , HOH K:341 , HOH K:346 , HOH K:352 , LYS R:88 , GLU R:89 , 4CQ R:201 , HOH R:301 , HOH R:304
binding site for residue 4CQ K 202
26
AE8
SOFTWARE
ILE B:115 , HOH B:315 , ILE L:103 , PRO L:104 , ALA L:114 , ILE L:115 , LEU L:116 , HOH L:356 , HOH P:306
binding site for residue GOL L 201
27
AE9
SOFTWARE
GLU D:120 , HIS D:154 , LYS D:156 , LYS H:88 , GLU H:89 , HOH H:358 , SER L:93 , TRP L:99 , THR L:101 , LYS L:102 , LYS L:126 , TRP L:133 , SER L:144 , GLN L:145 , THR L:148 , ASN L:150 , HOH L:331 , HOH L:332 , HOH L:339 , HOH L:350 , HOH L:362 , HOH L:371
binding site for residue 4CQ L 202
28
AF1
SOFTWARE
ILE M:103 , PRO M:104 , ALA M:114 , ILE M:115 , LEU M:116 , HOH M:394
binding site for residue GOL M 201
29
AF2
SOFTWARE
TRP M:99 , LYS M:102 , LYS M:126 , TRP M:133 , SER M:144 , GLN M:145 , LEU M:146 , THR M:148 , ASN M:150 , HOH M:329 , HOH M:350 , HOH M:351 , HOH M:353 , HOH M:376 , HOH M:391 , HOH M:398 , HOH M:411
binding site for residue 4CQ M 202
30
AF3
SOFTWARE
ILE N:81 , ARG N:82 , GLU N:139 , HOH N:304 , HOH N:352 , HIS O:109 , HOH O:326
binding site for residue GOL N 201
31
AF4
SOFTWARE
HIS N:109 , HOH N:305 , HOH N:317 , VAL O:80 , ILE O:81 , ARG O:82 , GLU O:139
binding site for residue GOL N 202
32
AF5
SOFTWARE
LYS A:156 , GLU D:89 , ASN E:98 , 4CQ E:202 , TRP N:99 , SER N:100 , THR N:101 , LYS N:102 , LYS N:126 , TRP N:133 , SER N:144 , GLN N:145 , THR N:148 , ASN N:150 , HOH N:330 , HOH N:345 , HOH N:369
binding site for residue 4CQ N 203
33
AF6
SOFTWARE
LYS F:156 , SER O:93 , TRP O:99 , SER O:100 , LYS O:102 , LYS O:126 , TRP O:133 , SER O:144 , GLN O:145 , LEU O:146 , THR O:148 , ASN O:150 , HOH O:302 , HOH O:327 , HOH O:364 , HOH O:366 , HOH O:367 , HOH O:389 , HOH O:390 , HOH Q:302
binding site for residue 4CQ O 201
34
AF7
SOFTWARE
ILE H:115 , ILE P:103 , PRO P:104 , ILE P:106 , ALA P:114 , ILE P:115 , HOH P:307
binding site for residue GOL P 201
35
AF8
SOFTWARE
SER P:93 , TRP P:99 , LYS P:102 , LYS P:126 , TRP P:133 , SER P:144 , GLN P:145 , LEU P:146 , THR P:148 , ASN P:150 , HOH P:343 , HOH P:371 , HOH P:372
binding site for residue 4CQ P 202
36
AF9
SOFTWARE
GLN O:132 , SER Q:93 , TRP Q:99 , LYS Q:102 , LYS Q:126 , TRP Q:133 , SER Q:144 , GLN Q:145 , LEU Q:146 , THR Q:148 , ASN Q:150 , HOH Q:311 , HOH Q:314 , HOH Q:327 , HOH Q:332 , HOH Q:352 , HOH Q:354 , HOH Q:365 , HOH Q:368 , HOH Q:373
binding site for residue 4CQ Q 201
37
AG1
SOFTWARE
GLN K:132 , 4CQ K:202 , SER R:93 , TRP R:99 , LYS R:102 , LYS R:126 , TRP R:133 , SER R:144 , GLN R:145 , LEU R:146 , THR R:148 , ASN R:150 , HOH R:302 , HOH R:304 , HOH R:305 , HOH R:317 , HOH R:336 , HOH R:341 , HOH R:354
binding site for residue 4CQ R 201
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