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4TL3
Asym. Unit
Info
Asym.Unit (91 KB)
Biol.Unit 1 (84 KB)
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(1)
Title
:
MECHANISTIC INSIGHTS FROM THE CRYSTAL STRUCTURE OF AN INWARD PROTON-TRANSPORTING ANABAENA SENSORY RHODOPSIN MUTANT
Authors
:
B. H. Dong, H. Luecke
Date
:
29 May 14 (Deposition) - 16 Jul 14 (Release) - 29 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Transmembrane, Photoreceptor, Proton Pump, Bacterial Rhodopsin, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. H. Dong, H. Luecke
Mechanistic Insights From The Crystal Structure Of An Inwar Proton-Transportinganabaena Sensory Rhodopsin Mutant
To Be Published
[
close entry info
]
Hetero Components
(2, 37)
Info
All Hetero Components
1a: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEa)
1aa: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEaa)
1ab: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEab)
1ac: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEac)
1ad: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEad)
1ae: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEae)
1af: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEaf)
1ag: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEag)
1ah: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEah)
1ai: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEai)
1b: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEb)
1c: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEc)
1d: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEd)
1e: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEe)
1f: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEf)
1g: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEg)
1h: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEh)
1i: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEi)
1j: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEj)
1k: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEk)
1l: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEl)
1m: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEm)
1n: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEn)
1o: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEo)
1p: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEp)
1q: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEq)
1r: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEr)
1s: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEs)
1t: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEt)
1u: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEu)
1v: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEv)
1w: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEw)
1x: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEx)
1y: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEy)
1z: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEz)
2a: RETINAL (RETa)
2b: RETINAL (RETb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PEE
35
Ligand/Ion
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
2
RET
2
Ligand/Ion
RETINAL
[
close Hetero Component info
]
Sites
(34, 34)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:76 , THR A:80 , LEU A:83 , VAL A:112 , TYR A:132 , PHE A:139 , TRP A:176 , TYR A:179 , LYS A:210
binding site for residue RET A 301
02
AC2
SOFTWARE
MET A:1 , TRP A:9 , THR A:16
binding site for residue PEE A 303
03
AC3
SOFTWARE
LYS A:167 , PEE A:317
binding site for residue PEE A 304
04
AC4
SOFTWARE
PHE A:42
binding site for residue PEE A 305
05
AC5
SOFTWARE
TYR A:70 , MET A:77 , TRP B:126
binding site for residue PEE A 306
06
AC6
SOFTWARE
PEE B:304
binding site for residue PEE A 308
07
AC7
SOFTWARE
TRP A:46
binding site for residue PEE A 309
08
AC8
SOFTWARE
TRP A:99 , THR A:100 , SER A:107
binding site for residue PEE A 310
09
AC9
SOFTWARE
TRP A:23 , ARG A:27
binding site for residue PEE A 311
10
AD1
SOFTWARE
TRP A:23 , ILE A:45 , GLY A:48
binding site for residue PEE A 312
11
AD2
SOFTWARE
TRP A:147
binding site for residue PEE A 313
12
AD3
SOFTWARE
TRP A:126
binding site for residue PEE A 314
13
AD4
SOFTWARE
GLY A:178 , PEE B:312
binding site for residue PEE A 315
14
AD5
SOFTWARE
PHE A:208 , PEE A:304
binding site for residue PEE A 317
15
AD6
SOFTWARE
PEE A:321 , TRP B:99 , THR B:100 , SER B:107 , PEE B:302
binding site for residue PEE A 319
16
AD7
SOFTWARE
TRP A:144 , ASN A:148 , PRO A:149 , PEE A:319
binding site for residue PEE A 321
17
AD8
SOFTWARE
PEE A:319 , MET B:77 , TRP B:99 , PEE B:310
binding site for residue PEE B 302
18
AD9
SOFTWARE
PEE B:318
binding site for residue PEE B 303
19
AE1
SOFTWARE
ILE A:17 , PHE A:207 , PHE A:215 , PEE A:308 , TRP B:192
binding site for residue PEE B 304
20
AE2
SOFTWARE
THR B:170
binding site for residue PEE B 305
21
AE3
SOFTWARE
TRP B:147 , ARG B:151
binding site for residue PEE B 306
22
AE4
SOFTWARE
MET B:1 , TRP B:9 , THR B:16
binding site for residue PEE B 307
23
AE5
SOFTWARE
PHE B:42 , TRP B:46
binding site for residue PEE B 308
24
AE6
SOFTWARE
LEU A:3 , THR A:196 , PHE A:200 , TRP B:23 , ARG B:27
binding site for residue PEE B 309
25
AE7
SOFTWARE
TRP A:126 , TRP A:131 , TYR B:70 , PEE B:302
binding site for residue PEE B 310
26
AE8
SOFTWARE
VAL A:174 , PEE A:315 , MET B:1
binding site for residue PEE B 312
27
AE9
SOFTWARE
TYR B:171
binding site for residue PEE B 313
28
AF1
SOFTWARE
ILE B:141
binding site for residue PEE B 315
29
AF2
SOFTWARE
PHE B:94 , LEU B:224 , ASN B:225 , HOH B:628 , HOH B:643
binding site for residue PEE B 317
30
AF3
SOFTWARE
TRP A:192 , ILE B:17 , PHE B:215 , HIS B:219 , PEE B:303
binding site for residue PEE B 318
31
AF4
SOFTWARE
LEU B:205 , PEE B:320
binding site for residue PEE B 319
32
AF5
SOFTWARE
VAL B:174 , PEE B:319
binding site for residue PEE B 320
33
AF6
SOFTWARE
TYR B:129 , ILE B:133
binding site for residue PEE B 322
34
AF7
SOFTWARE
TYR B:11 , SER B:47 , ASP B:75 , TRP B:76 , THR B:79 , THR B:80 , VAL B:112 , PHE B:139 , TRP B:176 , TYR B:179 , TRP B:183 , PRO B:206 , PHE B:207 , PHE B:208 , SER B:209 , VAL B:211 , SER B:214 , HOH B:502
binding site for residue RET B 301
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
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Pfam Domains
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