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4RGE
Biol. Unit 3
Info
Asym.Unit (164 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (55 KB)
Biol.Unit 3 (54 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE IN-LINE ALIGNED ENV22 TWISTER RIBOZYME
Authors
:
A. Ren, K. R. Rajashankar, D. Simanshu, D. Patel
Date
:
30 Sep 14 (Deposition) - 03 Dec 14 (Release) - 03 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.89
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Pseudoknot, Stem, Cleavage, Deoxyuridine Monophosphate, Rna
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Ren, M. Kosutic, K. R. Rajashankar, M. Frener, T. Santner, E. Westhof, R. Micura, D. J. Patel
In-Line Alignment And Mg(2+) Coordination At The Cleavage Site Of The Env22 Twister Ribozyme.
Nat Commun V. 5 5534 2014
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: (DUa)
1b: (DUb)
1c: (DUc)
2a: MAGNESIUM ION (MGa)
2aa: MAGNESIUM ION (MGaa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
2h: MAGNESIUM ION (MGh)
2i: MAGNESIUM ION (MGi)
2j: MAGNESIUM ION (MGj)
2k: MAGNESIUM ION (MGk)
2l: MAGNESIUM ION (MGl)
2m: MAGNESIUM ION (MGm)
2n: MAGNESIUM ION (MGn)
2o: MAGNESIUM ION (MGo)
2p: MAGNESIUM ION (MGp)
2q: MAGNESIUM ION (MGq)
2r: MAGNESIUM ION (MGr)
2s: MAGNESIUM ION (MGs)
2t: MAGNESIUM ION (MGt)
2u: MAGNESIUM ION (MGu)
2v: MAGNESIUM ION (MGv)
2w: MAGNESIUM ION (MGw)
2x: MAGNESIUM ION (MGx)
2y: MAGNESIUM ION (MGy)
2z: MAGNESIUM ION (MGz)
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Sites
(10, 10)
Info
All Sites
01: AC8 (SOFTWARE)
02: CC1 (SOFTWARE)
03: CC2 (SOFTWARE)
04: CC3 (SOFTWARE)
05: CC4 (SOFTWARE)
06: CC5 (SOFTWARE)
07: CC6 (SOFTWARE)
08: CC7 (SOFTWARE)
09: CC8 (SOFTWARE)
10: CC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC8
SOFTWARE
G A:19 , HOH A:217 , HOH A:218 , HOH A:219 , U B:30 , C B:31 , U C:41
BINDING SITE FOR RESIDUE MG A 108
02
CC1
SOFTWARE
A C:6 , A C:7 , U C:8 , HOH C:205 , HOH C:206 , HOH C:207
BINDING SITE FOR RESIDUE MG C 101
03
CC2
SOFTWARE
HOH C:201 , HOH C:203 , HOH C:204 , HOH C:225
BINDING SITE FOR RESIDUE MG C 102
04
CC3
SOFTWARE
U C:24 , HOH C:208 , HOH C:209 , HOH C:210
BINDING SITE FOR RESIDUE MG C 103
05
CC4
SOFTWARE
A C:26 , HOH C:211
BINDING SITE FOR RESIDUE MG C 104
06
CC5
SOFTWARE
G C:27 , G C:28 , HOH C:213 , HOH C:214 , HOH C:215 , HOH C:216
BINDING SITE FOR RESIDUE MG C 105
07
CC6
SOFTWARE
U C:30 , HOH C:217 , HOH C:222
BINDING SITE FOR RESIDUE MG C 106
08
CC7
SOFTWARE
A C:42 , A C:43 , HOH C:218 , HOH C:219 , HOH C:220 , HOH C:224
BINDING SITE FOR RESIDUE MG C 107
09
CC8
SOFTWARE
HOH C:223
BINDING SITE FOR RESIDUE MG C 108
10
CC9
SOFTWARE
HOH C:227
BINDING SITE FOR RESIDUE MG C 109
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SAPs(SNPs)/Variants
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain C
Asymmetric Unit 1
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Asym.Unit (164 KB)
Header - Asym.Unit
Biol.Unit 1 (53 KB)
Header - Biol.Unit 1
Biol.Unit 2 (55 KB)
Header - Biol.Unit 2
Biol.Unit 3 (54 KB)
Header - Biol.Unit 3
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