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Asym. Unit
Info
Asym.Unit (114 KB)
Biol.Unit 1 (108 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GOAT LACTOPEROXIDASE IN COMPLEX WITH OCTOPAMINE AT 2.1 ANGSTROM RESOLUTION
Authors
:
R. P. Singh, G. S. Kushwaha, A. K. Singh, M. Sinha, P. Kaur, S. Sharma, T. P
Date
:
04 Jun 14 (Deposition) - 18 Jun 14 (Release) - 18 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Lactoperoxidase, Oxidoreductase, Peroxidase, Oxidoreductase-Oxido Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. P. Singh, G. S. Kushwaha, A. K. Singh, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Crystal Structure Of Goat Lactoperoxidase In Complex With Octopamine At 2. 1 Angstrom Resolution
To Be Published
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Hetero Components
(9, 26)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4a: IODIDE ION (IODa)
4b: IODIDE ION (IODb)
4c: IODIDE ION (IODc)
4d: IODIDE ION (IODd)
4e: IODIDE ION (IODe)
4f: IODIDE ION (IODf)
4g: IODIDE ION (IODg)
4h: IODIDE ION (IODh)
4i: IODIDE ION (IODi)
4j: IODIDE ION (IODj)
4k: IODIDE ION (IODk)
4l: IODIDE ION (IODl)
4m: IODIDE ION (IODm)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6a: 4-(2R-AMINO-1-HYDROXYETHYL)PHENOL (OTRa)
7a: DI(HYDROXYETHYL)ETHER (PEGa)
7b: DI(HYDROXYETHYL)ETHER (PEGb)
8a: THIOCYANATE ION (SCNa)
9a: PHOSPHOSERINE (SEPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
IOD
13
Ligand/Ion
IODIDE ION
5
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
OTR
1
Ligand/Ion
4-(2R-AMINO-1-HYDROXYETHYL)PHENOL
7
PEG
2
Ligand/Ion
DI(HYDROXYETHYL)ETHER
8
SCN
1
Ligand/Ion
THIOCYANATE ION
9
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
[
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , ARG A:255 , GLU A:258 , GLN A:259 , THR A:344 , PHE A:347 , ARG A:348 , GLY A:350 , HIS A:351 , LEU A:417 , LEU A:433 , ILE A:436 , ARG A:440 , OTR A:614 , HOH A:718 , HOH A:792 , HOH A:904 , HOH A:937
BINDING SITE FOR RESIDUE HEM A 601
02
AC2
SOFTWARE
ASN A:241 , ALA A:244 , TRP A:384 , LYS A:388 , HOH A:735 , HOH A:863 , HOH A:885
BINDING SITE FOR RESIDUE NAG A 602
03
AC3
SOFTWARE
ASN A:95 , ARG A:96 , ILE A:315 , GLN A:568 , HOH A:917
BINDING SITE FOR RESIDUE NAG A 603
04
AC4
SOFTWARE
ASN A:332 , SER A:334 , HOH A:734 , HOH A:760
BINDING SITE FOR RESIDUE NAG A 604
05
AC5
SOFTWARE
ASN A:205 , SER A:208 , LEU A:210 , ALA A:214 , VAL A:215 , GLN A:217 , HOH A:702 , HOH A:782 , HOH A:927 , HOH A:1005
BINDING SITE FOR RESIDUE NAG A 605
06
AC6
SOFTWARE
ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190
BINDING SITE FOR RESIDUE CA A 606
07
AC7
SOFTWARE
TRP A:46 , VAL A:342 , TRP A:452
BINDING SITE FOR RESIDUE IOD A 607
08
AC8
SOFTWARE
PRO A:145
BINDING SITE FOR RESIDUE IOD A 610
09
AC9
SOFTWARE
HIS A:565 , ALA A:566 , PHE A:567
BINDING SITE FOR RESIDUE IOD A 612
10
BC1
SOFTWARE
ASN A:230 , VAL A:232
BINDING SITE FOR RESIDUE SCN A 613
11
BC2
SOFTWARE
HIS A:109 , ARG A:255 , GLU A:258 , PHE A:381 , GLN A:423 , PRO A:424 , HEM A:601 , HOH A:718 , HOH A:937 , HOH A:971
BINDING SITE FOR RESIDUE OTR A 614
12
BC3
SOFTWARE
ARG A:76 , ASN A:80 , PRO A:149 , LYS A:150 , ARG A:418 , ASN A:419
BINDING SITE FOR RESIDUE PEG A 615
13
BC4
SOFTWARE
ARG A:45 , TRP A:46 , LEU A:47 , PRO A:48 , HOH A:796
BINDING SITE FOR RESIDUE PEG A 616
14
BC5
SOFTWARE
LYS A:462 , THR A:463
BINDING SITE FOR RESIDUE IOD A 617
15
BC6
SOFTWARE
ALA A:225
BINDING SITE FOR RESIDUE IOD A 618
16
BC7
SOFTWARE
ARG A:397 , THR A:560
BINDING SITE FOR RESIDUE IOD A 620
17
BC8
SOFTWARE
ARG A:96 , HOH A:993
BINDING SITE FOR RESIDUE IOD A 621
18
BC9
SOFTWARE
SER A:359
BINDING SITE FOR RESIDUE IOD A 622
19
CC1
SOFTWARE
ARG A:202
BINDING SITE FOR RESIDUE IOD A 623
20
CC2
SOFTWARE
ALA A:35 , LEU A:36 , ARG A:41 , HOH A:873
BINDING SITE FOR RESIDUE EDO A 624
21
CC3
SOFTWARE
HIS A:377 , HIS A:429 , HOH A:988
BINDING SITE FOR RESIDUE EDO A 625
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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Sorry, no Info available
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CATH Domains
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Sorry, no Info available
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (114 KB)
Header - Asym.Unit
Biol.Unit 1 (108 KB)
Header - Biol.Unit 1
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