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4P9T
Biol. Unit 4
Info
Asym.Unit (143 KB)
Biol.Unit 1 (36 KB)
Biol.Unit 2 (36 KB)
Biol.Unit 3 (36 KB)
Biol.Unit 4 (36 KB)
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(1)
Title
:
STRUCTURE OF THE FREE FORM OF THE N-TERMINAL VH1 DOMAIN OF MONOMERIC ALPHA-CATENIN
Authors
:
T. Shibahara, Y. Hirano, T. Hakoshima
Date
:
04 Apr 14 (Deposition) - 29 Apr 15 (Release) - 15 Jul 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: C (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: B (1x)
Biol. Unit 4: D (1x)
Keywords
:
Cytoskeletal Protein, Adherens Junction, Helix Bundle
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. Shibahara, Y. Hirano, T. Hakoshima
Structure Of The Free Form Of The N-Terminal Vh1 Domain Of Monomeric Alpha-Catenin.
Febs Lett. V. 589 1754 2015
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
2a: IODIDE ION (IODa)
2b: IODIDE ION (IODb)
2c: IODIDE ION (IODc)
2d: IODIDE ION (IODd)
2e: IODIDE ION (IODe)
2f: IODIDE ION (IODf)
2g: IODIDE ION (IODg)
2h: IODIDE ION (IODh)
2i: IODIDE ION (IODi)
2j: IODIDE ION (IODj)
2k: IODIDE ION (IODk)
2l: IODIDE ION (IODl)
2m: IODIDE ION (IODm)
2n: IODIDE ION (IODn)
2o: IODIDE ION (IODo)
2p: IODIDE ION (IODp)
2q: IODIDE ION (IODq)
2r: IODIDE ION (IODr)
2s: IODIDE ION (IODs)
2t: IODIDE ION (IODt)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
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Label:
No.
Name
Count
Type
Full Name
1
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
2
IOD
5
Ligand/Ion
IODIDE ION
3
PEG
-1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
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Sites
(13, 13)
Info
All Sites
01: AD4 (SOFTWARE)
02: AD6 (SOFTWARE)
03: AD8 (SOFTWARE)
04: AE2 (SOFTWARE)
05: AE3 (SOFTWARE)
06: AE4 (SOFTWARE)
07: AE5 (SOFTWARE)
08: AE6 (SOFTWARE)
09: AE7 (SOFTWARE)
10: AE8 (SOFTWARE)
11: AE9 (SOFTWARE)
12: AF1 (SOFTWARE)
13: AF2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AD4
SOFTWARE
VAL A:184 , LYS A:185 , ALA B:226 , VAL D:233 , ALA D:234 , ALA D:235
binding site for residue EDO B 307
02
AD6
SOFTWARE
EDO C:308 , THR D:222
binding site for residue IOD C 301
03
AD8
SOFTWARE
LYS C:214 , LYS D:215
binding site for residue IOD C 304
04
AE2
SOFTWARE
VAL A:233 , ALA A:234 , ALA A:235 , ALA C:226 , VAL D:184 , LYS D:185
binding site for residue EDO C 307
05
AE3
SOFTWARE
VAL C:184 , IOD C:301 , MET D:219 , THR D:222 , ALA D:223 , ASN D:239 , HOH D:401
binding site for residue EDO C 308
06
AE4
SOFTWARE
GLY C:211 , LYS C:215 , GLY D:211 , LYS D:215
binding site for residue PEG C 309
07
AE5
SOFTWARE
THR C:222 , EDO D:308
binding site for residue IOD D 301
08
AE6
SOFTWARE
MET D:183 , ARG D:210
binding site for residue IOD D 302
09
AE7
SOFTWARE
LYS C:215 , LYS D:214
binding site for residue IOD D 304
10
AE8
SOFTWARE
ALA D:250
binding site for residue IOD D 305
11
AE9
SOFTWARE
GLN D:194 , GLN D:195 , ARG D:203
binding site for residue EDO D 306
12
AF1
SOFTWARE
VAL B:233 , ALA B:234 , ALA B:235 , LYS C:185 , ALA D:226
binding site for residue EDO D 307
13
AF2
SOFTWARE
MET C:219 , THR C:222 , ALA C:223 , ASN C:239 , VAL D:184 , IOD D:301
binding site for residue EDO D 308
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain D
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (143 KB)
Header - Asym.Unit
Biol.Unit 1 (36 KB)
Header - Biol.Unit 1
Biol.Unit 2 (36 KB)
Header - Biol.Unit 2
Biol.Unit 3 (36 KB)
Header - Biol.Unit 3
Biol.Unit 4 (36 KB)
Header - Biol.Unit 4
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