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4OOE
Biol. Unit 2
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Asym.Unit (271 KB)
Biol.Unit 1 (136 KB)
Biol.Unit 2 (132 KB)
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(1)
Title
:
M. TUBERCULOSIS 1-DEOXY-D-XYLULOSE-5-PHOSPHATE REDUCTOISOMERASE W203Y MUTANT BOUND TO FOSMIDOMYCIN AND NADPH
Authors
:
C. L. Allen, S. A. Kholodar, A. S. Murkin, A. M. Gulick
Date
:
31 Jan 14 (Deposition) - 18 Jun 14 (Release) - 18 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.83
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Reductoisomerase, Oxidoreductase-Antibiotic Complex
(Keyword Search:
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Reference
:
S. A. Kholodar, G. Tombline, J. Liu, Z. Tan, C. L. Allen, A. M. Gulick, A. S. Murkin
Alteration Of The Flexible Loop In 1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase Boosts Enthalpy-Driven Inhibition By Fosmidomycin.
Biochemistry V. 53 3423 2014
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOS... (FOMa)
1b: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOS... (FOMb)
1c: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOS... (FOMc)
1d: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOS... (FOMd)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
2c: MANGANESE (II) ION (MNc)
2d: MANGANESE (II) ION (MNd)
3a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
3b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
3c: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPc)
3d: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPd)
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No.
Name
Count
Type
Full Name
1
FOM
2
Ligand/Ion
3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID
2
MN
-1
Ligand/Ion
MANGANESE (II) ION
3
NDP
2
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
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Sites
(6, 6)
Info
All Sites
1: AC7 (SOFTWARE)
2: AC8 (SOFTWARE)
3: AC9 (SOFTWARE)
4: BC1 (SOFTWARE)
5: BC2 (SOFTWARE)
6: BC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC7
SOFTWARE
ASP C:151 , SER C:152 , GLU C:153 , ALA C:176 , SER C:177 , HIS C:200 , TYR C:203 , SER C:213 , ASN C:218 , LYS C:219 , GLU C:222 , MET C:267 , MN C:501 , NDP C:502 , HOH C:603 , HOH C:615 , HOH C:631
BINDING SITE FOR RESIDUE FOM C 500
2
AC8
SOFTWARE
LYS C:128 , ASP C:151 , GLU C:153 , GLU C:222 , FOM C:500
BINDING SITE FOR RESIDUE MN C 501
3
AC9
SOFTWARE
GLY C:19 , THR C:21 , GLY C:22 , SER C:23 , ILE C:24 , ALA C:46 , GLY C:47 , GLY C:48 , ALA C:49 , HIS C:50 , ALA C:69 , ALA C:103 , LEU C:104 , LEU C:108 , ALA C:126 , ASN C:127 , LYS C:128 , GLU C:129 , ASP C:151 , MET C:205 , GLY C:206 , PRO C:207 , ASN C:209 , MET C:267 , FOM C:500 , HOH C:613 , HOH C:625 , HOH C:632 , HOH C:634 , HOH C:647 , HOH C:651 , HOH C:655 , HOH C:680 , HOH C:801 , HOH C:804 , HOH C:840 , HOH C:940
BINDING SITE FOR RESIDUE NDP C 502
4
BC1
SOFTWARE
LYS D:128 , ASP D:151 , SER D:152 , GLU D:153 , ALA D:176 , SER D:177 , HIS D:200 , TYR D:203 , MET D:205 , SER D:213 , ASN D:218 , LYS D:219 , GLU D:222 , MN D:501 , NDP D:502 , HOH D:610 , HOH D:613 , HOH D:636
BINDING SITE FOR RESIDUE FOM D 500
5
BC2
SOFTWARE
ASP D:151 , GLU D:153 , GLU D:222 , FOM D:500
BINDING SITE FOR RESIDUE MN D 501
6
BC3
SOFTWARE
GLY D:19 , THR D:21 , GLY D:22 , SER D:23 , ILE D:24 , ALA D:46 , GLY D:47 , GLY D:48 , ALA D:49 , HIS D:50 , ALA D:69 , ALA D:103 , LEU D:104 , ALA D:126 , ASN D:127 , LYS D:128 , GLU D:129 , ASP D:151 , MET D:205 , GLY D:206 , ASN D:209 , MET D:267 , FOM D:500 , HOH D:614 , HOH D:615 , HOH D:622 , HOH D:643 , HOH D:647 , HOH D:681 , HOH D:719 , HOH D:752 , HOH D:765 , HOH D:863 , HOH D:881 , HOH D:888 , HOH D:898 , HOH D:947
BINDING SITE FOR RESIDUE NDP D 502
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SAPs(SNPs)/Variants
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (271 KB)
Header - Asym.Unit
Biol.Unit 1 (136 KB)
Header - Biol.Unit 1
Biol.Unit 2 (132 KB)
Header - Biol.Unit 2
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