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4NF2
Asym. Unit
Info
Asym.Unit (327 KB)
Biol.Unit 1 (319 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ANABOLIC ORNITHINE CARBAMOYLTRANSFERASE FROM BACILLUS ANTHRACIS IN COMPLEX WITH CARBAMOYL PHOSPHATE AND L-NORVALINE
Authors
:
I. G. Shabalin, K. Handing, M. T. Cymborowski, J. Stam, J. Winsor, L. Shu W. F. Anderson, W. Minor, Center For Structural Genomics Of Infe Diseases (Csgid)
Date
:
30 Oct 13 (Deposition) - 13 Nov 13 (Release) - 13 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.74
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Structural Genomics, Niaid, National Institute Of Allergy And Infectious Diseases, Center For Structural Genomics Of Infectious Diseases, Csgid, Carbamoyl Phosphate, L-Ornithine, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. G. Shabalin, K. Handing, M. T. Cymborowski, J. Stam, J. Winsor, L. Shuvalova, W. F. Anderson, W. Minor
Crystal Structures And Kinetic Properties Of Anabolic Ornithine Carbamoyltransferase From Human Pathogens Vibrio Vulnificus And Bacillus Anthracis
To Be Published
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
2a: PHOSPHORIC ACID MONO(FORMAMIDE)EST... (CPa)
2b: PHOSPHORIC ACID MONO(FORMAMIDE)EST... (CPb)
2c: PHOSPHORIC ACID MONO(FORMAMIDE)EST... (CPc)
3a: NORVALINE (NVAa)
3b: NORVALINE (NVAb)
3c: NORVALINE (NVAc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
5
Ligand/Ion
CHLORIDE ION
2
CP
3
Ligand/Ion
PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
3
NVA
3
Ligand/Ion
NORVALINE
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:57 , THR A:58 , ARG A:59 , THR A:60 , ARG A:108 , HIS A:135 , GLN A:138 , CYS A:269 , LEU A:270 , ARG A:297 , NVA A:402 , GLN B:84
BINDING SITE FOR RESIDUE CP A 401
02
AC2
SOFTWARE
ASN A:165 , ASN A:166 , ASP A:230 , SER A:234 , MET A:235 , LEU A:270 , CP A:401 , HOH A:513 , HOH A:601
BINDING SITE FOR RESIDUE NVA A 402
03
AC3
SOFTWARE
ILE A:289 , VAL A:290 , PHE A:291 , GLU A:292
BINDING SITE FOR RESIDUE CL A 403
04
AC4
SOFTWARE
SER A:234 , GLY A:236 , HOH A:513 , HOH A:540
BINDING SITE FOR RESIDUE CL A 404
05
AC5
SOFTWARE
ILE B:289 , PHE B:291 , GLU B:292 , HOH B:619
BINDING SITE FOR RESIDUE CL B 401
06
AC6
SOFTWARE
LEU B:130 , ASN B:165 , ASN B:166 , ASP B:230 , SER B:234 , MET B:235 , LEU B:270 , CP B:403 , HOH B:645 , HOH B:666
BINDING SITE FOR RESIDUE NVA B 402
07
AC7
SOFTWARE
SER B:57 , THR B:58 , ARG B:59 , THR B:60 , ARG B:108 , HIS B:135 , GLN B:138 , CYS B:269 , LEU B:270 , ARG B:297 , NVA B:402 , GLN C:84
BINDING SITE FOR RESIDUE CP B 403
08
AC8
SOFTWARE
SER B:234 , GLY B:236 , HOH B:666 , HOH B:667
BINDING SITE FOR RESIDUE CL B 404
09
AC9
SOFTWARE
GLN A:84 , SER C:57 , THR C:58 , ARG C:59 , THR C:60 , ARG C:108 , HIS C:135 , GLN C:138 , CYS C:269 , LEU C:270 , ARG C:297 , NVA C:402
BINDING SITE FOR RESIDUE CP C 401
10
BC1
SOFTWARE
HOH A:520 , LEU C:130 , ASN C:165 , ASN C:166 , ASP C:230 , SER C:234 , MET C:235 , LEU C:270 , CP C:401 , HOH C:517
BINDING SITE FOR RESIDUE NVA C 402
11
BC2
SOFTWARE
HOH A:689 , ILE C:289 , PHE C:291 , GLU C:292 , HOH C:632
BINDING SITE FOR RESIDUE CL C 403
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d4nf2a1 (A:5-151)
1b: SCOP_d4nf2a2 (A:152-311)
1c: SCOP_d4nf2b1 (B:5-151)
1d: SCOP_d4nf2b2 (B:152-311)
1e: SCOP_d4nf2c1 (C:5-151)
1f: SCOP_d4nf2c2 (C:152-311)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ATC-like
(129)
Superfamily
:
Aspartate/ornithine carbamoyltransferase
(122)
Family
:
automated matches
(35)
Protein domain
:
automated matches
(35)
Bacillus anthracis [TaxId: 261594]
(1)
1a
d4nf2a1
A:5-151
1b
d4nf2a2
A:152-311
1c
d4nf2b1
B:5-151
1d
d4nf2b2
B:152-311
1e
d4nf2c1
C:5-151
1f
d4nf2c2
C:152-311
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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