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4MZA
Asym. Unit
Info
Asym.Unit (311 KB)
Biol.Unit 1 (301 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HPIV3 HEMAGGLUTININ-NEURAMINIDASE
Authors
:
R. Xu, I. A. Wilson
Date
:
29 Sep 13 (Deposition) - 06 Nov 13 (Release) - 27 Aug 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Viral Envelope Protein, Viral Fusion Protein, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Xu, S. G. Palmer, M. Porotto, L. M. Palermo, S. Niewiesk, I. A. Wilson A. Moscona
Interaction Between The Hemagglutinin-Neuraminidase And Fusion Glycoproteins Of Human Parainfluenza Virus Type Iii Regulates Viral Growth In Vivo.
Mbio V. 4 00803 2013
[
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Hetero Components
(8, 31)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
4a: BETA-L-FUCOSE (FULa)
5a: ALPHA-D-MANNOSE (MANa)
5b: ALPHA-D-MANNOSE (MANb)
5c: ALPHA-D-MANNOSE (MANc)
5d: ALPHA-D-MANNOSE (MANd)
5e: ALPHA-D-MANNOSE (MANe)
5f: ALPHA-D-MANNOSE (MANf)
5g: ALPHA-D-MANNOSE (MANg)
6a: N-ACETYL-D-GLUCOSAMINE (NAGa)
6b: N-ACETYL-D-GLUCOSAMINE (NAGb)
6c: N-ACETYL-D-GLUCOSAMINE (NAGc)
6d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6e: N-ACETYL-D-GLUCOSAMINE (NAGe)
6f: N-ACETYL-D-GLUCOSAMINE (NAGf)
6g: N-ACETYL-D-GLUCOSAMINE (NAGg)
6h: N-ACETYL-D-GLUCOSAMINE (NAGh)
6i: N-ACETYL-D-GLUCOSAMINE (NAGi)
7a: PHOSPHATE ION (PO4a)
7b: PHOSPHATE ION (PO4b)
8a: SULFATE ION (SO4a)
8b: SULFATE ION (SO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
3
Ligand/Ion
BETA-D-MANNOSE
2
CA
2
Ligand/Ion
CALCIUM ION
3
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
4
FUL
1
Ligand/Ion
BETA-L-FUCOSE
5
MAN
7
Ligand/Ion
ALPHA-D-MANNOSE
6
NAG
9
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
7
PO4
2
Ligand/Ion
PHOSPHATE ION
8
SO4
2
Ligand/Ion
SULFATE ION
[
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:279 , SER A:282 , GLY A:284 , ALA A:316 , HOH A:803
BINDING SITE FOR RESIDUE CA A 612
02
AC2
SOFTWARE
VAL A:197 , ALA A:259 , LEU A:260 , GLY A:325 , ILE A:326 , TYR A:327 , HOH A:746
BINDING SITE FOR RESIDUE EDO A 613
03
AC3
SOFTWARE
MET A:167 , LYS A:168 , THR A:169 , HIS A:342 , HOH A:937 , HOH A:944
BINDING SITE FOR RESIDUE SO4 A 614
04
AC4
SOFTWARE
TRP A:465 , ASP A:497 , GLN A:499 , ARG A:515
BINDING SITE FOR RESIDUE EDO A 615
05
AC5
SOFTWARE
SER A:498 , GLN A:499 , HOH A:928 , HOH A:950
BINDING SITE FOR RESIDUE EDO A 616
06
AC6
SOFTWARE
ASP B:279 , SER B:282 , GLY B:284 , ALA B:316 , HOH B:732
BINDING SITE FOR RESIDUE CA B 610
07
AC7
SOFTWARE
HIS A:552 , LYS A:553 , SER A:554 , HIS B:552 , LYS B:553 , SER B:554 , LEU B:555 , HOH B:800
BINDING SITE FOR RESIDUE PO4 B 611
08
AC8
SOFTWARE
ARG B:424 , ARG B:502 , BMA B:603 , HOH B:895 , HOH B:915 , HOH B:922
BINDING SITE FOR RESIDUE PO4 B 612
09
AC9
SOFTWARE
ARG B:361 , HIS B:538 , TYR B:539 , ASN B:540 , LYS B:541 , HOH B:933
BINDING SITE FOR RESIDUE SO4 B 613
10
BC1
SOFTWARE
VAL B:197 , ALA B:259 , LEU B:260 , GLY B:325 , ILE B:326 , TYR B:327 , HOH B:707
BINDING SITE FOR RESIDUE EDO B 614
11
BC2
SOFTWARE
TRP B:465 , ASP B:497 , SER B:498 , GLN B:499 , ARG B:515
BINDING SITE FOR RESIDUE EDO B 615
12
BC3
SOFTWARE
THR A:302 , ARG A:303 , ASN A:308
BINDING SITE FOR MONO-SACCHARIDE NAG A 601 BOUND TO ASN A 308
13
BC4
SOFTWARE
ASN A:351 , THR A:353 , TRP A:451 , THR A:513 , HOH A:779 , HOH A:795 , HOH A:814 , HOH A:818 , HOH A:878 , HOH A:880 , HOH A:929 , HOH A:930 , HOH A:945 , HOH A:963 , HOH A:999 , LYS B:273 , GLY B:284 , LYS B:305 , ASN B:306 , ASN B:307 , PRO B:314 , TYR B:315 , GLU B:341 , ASN B:461 , HOH B:725
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 351 RESIDUES 602 TO 610
14
BC5
SOFTWARE
ARG A:522 , ASN A:523 , THR A:525
BINDING SITE FOR MONO-SACCHARIDE NAG A 611 BOUND TO ASN A 523
15
BC6
SOFTWARE
THR B:302 , ARG B:303 , ASN B:308 , PRO B:458 , GLY B:459 , ASN B:460 , THR B:475 , GLY B:476 , LYS B:500 , ARG B:502 , PO4 B:612 , HOH B:824
BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 308 RESIDUES 601 TO 604
16
BC7
SOFTWARE
LYS A:305 , ASN B:351 , TRP B:451
BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 351 RESIDUES 605 TO 607
17
BC8
SOFTWARE
ARG B:522 , ASN B:523 , THR B:525
BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 523 RESIDUES 608 TO 609
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4mzaa_ (A:)
1b: SCOP_d4mzab_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
6-bladed beta-propeller
(327)
Superfamily
:
Sialidases
(238)
Family
:
Sialidases (neuraminidases)
(178)
Protein domain
:
automated matches
(38)
Human parainfluenza 3 virus [TaxId: 11217]
(2)
1a
d4mzaa_
A:
1b
d4mzab_
B:
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Variant
Protein & NOT Site
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
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Asym.Unit (311 KB)
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