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4MIO
Asym. Unit
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Asym.Unit (250 KB)
Biol.Unit 1 (243 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MYO-INOSITOL DEHYDROGENASE FROM LACTOBACILLUS CASEI IN COMPLEX WITH NAD(H) AND MYO-INOSITOL
Authors
:
D. Bertwistle, D. A. R. Sanders, D. R. J. Palmer
Date
:
02 Sep 13 (Deposition) - 04 Mar 15 (Release) - 04 Mar 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Nad, Nad(H), Sugar Alcohol Dehydrogenases, Rossmann Fold, Dehydrogenase, Nad Binding, Myo-Inositol Binding, Dehydrogenate, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Bertwistle, H. Aamudalapalli, D. A. R. Sanders, D. R. J. Palmer
Crystal Structure Of Myo-Inositol Dehydrogenase From Lactobacillus Casei In Complex With Nad(H) And Myo-Inositol
To Be Published
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Hetero Components
(4, 26)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
1k: GLYCEROL (GOLk)
1l: GLYCEROL (GOLl)
1m: GLYCEROL (GOLm)
1n: GLYCEROL (GOLn)
1o: GLYCEROL (GOLo)
2a: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXAN... (INSa)
3a: 1,4-DIHYDRONICOTINAMIDE ADENINE DI... (NAIa)
3b: 1,4-DIHYDRONICOTINAMIDE ADENINE DI... (NAIb)
3c: 1,4-DIHYDRONICOTINAMIDE ADENINE DI... (NAIc)
3d: 1,4-DIHYDRONICOTINAMIDE ADENINE DI... (NAId)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
15
Ligand/Ion
GLYCEROL
2
INS
1
Ligand/Ion
1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE
3
NAI
4
Ligand/Ion
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
4
SO4
6
Ligand/Ion
SULFATE ION
[
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]
Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:11 , ALA A:12 , MET A:13 , ASP A:35 , ILE A:36 , VAL A:73 , SER A:74 , PHE A:75 , ALA A:78 , HIS A:79 , GLU A:96 , LYS A:97 , GLY A:124 , HIS A:176 , TRP A:274 , TYR A:282 , HOH A:558 , HOH A:632 , HOH A:649 , HOH A:714 , HOH A:738
BINDING SITE FOR RESIDUE NAI A 401
02
AC2
SOFTWARE
ARG A:152 , ALA A:153 , SER A:154 , GLU A:241 , HOH A:612 , ARG C:152 , GLU C:241
BINDING SITE FOR RESIDUE GOL A 402
03
AC3
SOFTWARE
LEU A:25 , ASN A:283 , THR A:284 , HOH A:516 , HOH A:633 , HOH A:726
BINDING SITE FOR RESIDUE GOL A 403
04
AC4
SOFTWARE
LEU A:140 , ASP A:141 , PRO A:148 , LEU A:185 , HOH A:514 , SO4 C:405 , HOH C:613
BINDING SITE FOR RESIDUE GOL A 404
05
AC5
SOFTWARE
THR A:26 , GLY A:27 , HOH A:604 , HOH A:728 , HOH A:746 , THR D:26 , GLY D:27
BINDING SITE FOR RESIDUE SO4 A 405
06
AC6
SOFTWARE
ARG A:198 , HOH A:577 , HOH A:614 , HOH A:664 , ALA C:147 , PRO C:148 , LYS C:220
BINDING SITE FOR RESIDUE SO4 A 406
07
AC7
SOFTWARE
GLY B:11 , ALA B:12 , MET B:13 , ASP B:35 , ILE B:36 , VAL B:73 , SER B:74 , PHE B:75 , GLY B:76 , ALA B:78 , HIS B:79 , GLU B:96 , LYS B:97 , GLY B:124 , MET B:126 , HIS B:176 , TYR B:282 , HOH B:519 , HOH B:619 , HOH B:621 , HOH B:623 , HOH B:629 , HOH B:639 , HOH B:658 , HOH B:681 , HOH B:757
BINDING SITE FOR RESIDUE NAI B 401
08
AC8
SOFTWARE
HOH A:518 , LEU B:140 , ASP B:141 , GLY B:143 , PRO B:148 , HOH B:600
BINDING SITE FOR RESIDUE GOL B 402
09
AC9
SOFTWARE
GLN A:266 , GLN A:267 , THR A:268 , ILE B:259 , GLN B:266 , THR B:268
BINDING SITE FOR RESIDUE GOL B 403
10
BC1
SOFTWARE
HIS B:155 , ASP B:172 , THR B:173 , HIS B:176 , TYR B:236 , HOH B:529 , HOH B:658
BINDING SITE FOR RESIDUE GOL B 404
11
BC2
SOFTWARE
ILE B:275 , HOH B:629 , HOH B:635 , HOH B:662
BINDING SITE FOR RESIDUE GOL B 405
12
BC3
SOFTWARE
ARG B:152 , ALA B:153 , SER B:154 , GLU B:241 , HOH B:599 , ARG D:152 , GLU D:241
BINDING SITE FOR RESIDUE GOL B 406
13
BC4
SOFTWARE
HOH B:625 , HOH B:769 , PHE C:75 , GLY C:76 , GLY C:77 , HOH C:773 , HOH C:796
BINDING SITE FOR RESIDUE SO4 B 407
14
BC5
SOFTWARE
ARG B:198 , HOH B:595 , HOH B:760 , PRO D:148 , LYS D:220
BINDING SITE FOR RESIDUE SO4 B 408
15
BC6
SOFTWARE
HOH B:743 , GLY C:11 , ALA C:12 , MET C:13 , ASP C:35 , ILE C:36 , VAL C:73 , SER C:74 , PHE C:75 , GLY C:76 , ALA C:78 , HIS C:79 , GLU C:96 , LYS C:97 , GLY C:124 , MET C:126 , HIS C:176 , TYR C:282 , HOH C:508 , HOH C:578 , HOH C:615 , HOH C:632 , HOH C:634 , HOH C:636 , HOH C:709 , HOH C:771 , HOH C:776 , HOH C:777 , HOH C:806
BINDING SITE FOR RESIDUE NAI C 401
16
BC7
SOFTWARE
HOH C:597 , HOH C:600 , HOH C:620 , HOH C:679 , HOH C:759
BINDING SITE FOR RESIDUE GOL C 402
17
BC8
SOFTWARE
ARG A:152 , GLU A:241 , ARG C:152 , ALA C:153 , SER C:154 , GLU C:241 , HOH C:688
BINDING SITE FOR RESIDUE GOL C 403
18
BC9
SOFTWARE
ILE C:259 , GLN C:266 , THR C:268 , ILE D:259 , GLN D:266 , GLN D:267 , THR D:268
BINDING SITE FOR RESIDUE GOL C 404
19
CC1
SOFTWARE
ALA A:147 , PRO A:148 , LYS A:220 , GOL A:404 , ARG C:198 , HOH C:613 , HOH C:718
BINDING SITE FOR RESIDUE SO4 C 405
20
CC2
SOFTWARE
HOH C:629 , HOH C:699 , GLY D:11 , ALA D:12 , MET D:13 , ASP D:35 , ILE D:36 , VAL D:73 , SER D:74 , PHE D:75 , ALA D:78 , HIS D:79 , GLU D:96 , LYS D:97 , MET D:126 , ASP D:172 , TRP D:274 , TYR D:282 , INS D:402 , HOH D:501 , HOH D:538 , HOH D:541 , HOH D:552 , HOH D:590 , HOH D:641 , HOH D:642 , HOH D:681 , HOH D:688 , HOH D:770 , HOH D:779
BINDING SITE FOR RESIDUE NAI D 401
21
CC3
SOFTWARE
LYS D:97 , HIS D:155 , ASN D:157 , ASP D:172 , THR D:173 , HIS D:176 , TYR D:236 , NAI D:401 , HOH D:522 , HOH D:594 , HOH D:641
BINDING SITE FOR RESIDUE INS D 402
22
CC4
SOFTWARE
TYR D:129 , GLU D:288 , SO4 D:407 , HOH D:678 , HOH D:799
BINDING SITE FOR RESIDUE GOL D 403
23
CC5
SOFTWARE
GLN D:280 , ASN D:283 , HOH D:628 , HOH D:744
BINDING SITE FOR RESIDUE GOL D 404
24
CC6
SOFTWARE
ARG B:152 , GLU B:241 , ARG D:152 , ALA D:153 , SER D:154 , GLU D:241 , HOH D:561
BINDING SITE FOR RESIDUE GOL D 405
25
CC7
SOFTWARE
ARG C:46 , SER D:165 , ASN D:205 , GLU D:206 , HOH D:526 , HOH D:706
BINDING SITE FOR RESIDUE GOL D 406
26
CC8
SOFTWARE
ARG D:134 , TRP D:183 , GOL D:403
BINDING SITE FOR RESIDUE SO4 D 407
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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