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4KET
Asym. Unit
Info
Asym.Unit (442 KB)
Biol.Unit 1 (218 KB)
Biol.Unit 2 (221 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SSOPOX W263I
Authors
:
G. Gotthard, J. Hiblot, E. Chabriere, M. Elias
Date
:
26 Apr 13 (Deposition) - 02 Oct 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
(Beta/Alpha)8-Hydrolase, Lactonase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hiblot, G. Gotthard, M. Elias, E. Chabriere
Differential Active Site Loop Conformations Mediate Promiscuous Activities In The Lactonase Ssopox.
Plos One V. 8 75272 2013
[
close entry info
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Hetero Components
(7, 33)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
1b: COBALT (II) ION (COb)
1c: COBALT (II) ION (COc)
1d: COBALT (II) ION (COd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
3a: FE (II) ION (FE2a)
3b: FE (II) ION (FE2b)
3c: FE (II) ION (FE2c)
3d: FE (II) ION (FE2d)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
4i: GLYCEROL (GOLi)
4j: GLYCEROL (GOLj)
4k: GLYCEROL (GOLk)
5a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
5b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
5c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
5d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CO
4
Ligand/Ion
COBALT (II) ION
2
EDO
7
Ligand/Ion
1,2-ETHANEDIOL
3
FE2
4
Ligand/Ion
FE (II) ION
4
GOL
11
Ligand/Ion
GLYCEROL
5
KCX
4
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
6
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG4
2
Ligand/Ion
TETRAETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(29, 29)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:22 , HIS A:24 , KCX A:137 , ASP A:256 , CO A:402 , EDO A:403 , HOH A:699
BINDING SITE FOR RESIDUE FE2 A 401
02
AC2
SOFTWARE
KCX A:137 , HIS A:170 , HIS A:199 , ARG A:223 , FE2 A:401 , EDO A:403 , HOH A:699
BINDING SITE FOR RESIDUE CO A 402
03
AC3
SOFTWARE
HIS A:24 , TYR A:97 , KCX A:137 , HIS A:170 , ARG A:223 , ASP A:256 , FE2 A:401 , CO A:402 , HOH A:699 , HOH A:706
BINDING SITE FOR RESIDUE EDO A 403
04
AC4
SOFTWARE
PRO A:4 , LEU A:5 , LYS A:8 , ASP A:9 , SER A:10 , LEU A:130 , ASN A:131 , LYS A:132 , HOH A:552 , HOH A:681 , HOH A:694
BINDING SITE FOR RESIDUE GOL A 404
05
AC5
SOFTWARE
ASN A:160 , LYS A:164 , GLY A:189 , VAL A:190 , ASP A:191 , HOH A:663 , HOH A:676
BINDING SITE FOR RESIDUE GOL A 405
06
AC6
SOFTWARE
HIS A:120 , GLU A:124 , GLY A:128 , THR A:129 , HOH A:557 , HOH A:581 , HOH A:700 , HOH A:711
BINDING SITE FOR RESIDUE GOL A 406
07
AC7
SOFTWARE
PHE A:104 , TYR C:99 , PG4 C:404
BINDING SITE FOR RESIDUE EDO A 407
08
AC8
SOFTWARE
GLU A:298 , HOH A:609 , HOH A:683 , GLN B:58 , HOH B:576
BINDING SITE FOR RESIDUE EDO B 401
09
AC9
SOFTWARE
HIS B:22 , HIS B:24 , KCX B:137 , ASP B:256 , CO B:403 , GOL B:404 , HOH B:718
BINDING SITE FOR RESIDUE FE2 B 402
10
BC1
SOFTWARE
KCX B:137 , HIS B:170 , HIS B:199 , ARG B:223 , FE2 B:402 , GOL B:404 , HOH B:718
BINDING SITE FOR RESIDUE CO B 403
11
BC2
SOFTWARE
HIS B:24 , TYR B:97 , KCX B:137 , HIS B:170 , ARG B:223 , ASP B:256 , FE2 B:402 , CO B:403 , HOH B:718
BINDING SITE FOR RESIDUE GOL B 404
12
BC3
SOFTWARE
PRO B:4 , LEU B:5 , LYS B:8 , ASP B:9 , SER B:10 , LEU B:130 , ASN B:131 , LYS B:132 , HOH B:542 , HOH B:685 , HOH B:686 , HOH B:722 , HOH B:729
BINDING SITE FOR RESIDUE GOL B 405
13
BC4
SOFTWARE
ASN B:160 , LYS B:164 , GLY B:189 , VAL B:190 , ASP B:191 , LYS B:194 , HOH B:636
BINDING SITE FOR RESIDUE GOL B 406
14
BC5
SOFTWARE
HIS B:120 , GLU B:124 , GLY B:125 , ILE B:126 , GLN B:127 , GLY B:128 , THR B:129 , LEU B:130 , HOH B:589 , HOH B:656 , LYS D:164 , HOH D:507 , HOH D:703
BINDING SITE FOR RESIDUE PEG B 407
15
BC6
SOFTWARE
HIS C:22 , HIS C:24 , KCX C:137 , ASP C:256 , CO C:402 , HOH C:688
BINDING SITE FOR RESIDUE FE2 C 401
16
BC7
SOFTWARE
KCX C:137 , HIS C:170 , HIS C:199 , FE2 C:401 , PG4 C:404 , HOH C:688
BINDING SITE FOR RESIDUE CO C 402
17
BC8
SOFTWARE
ASP C:214 , GLY C:246 , TYR C:247 , ASP C:249
BINDING SITE FOR RESIDUE GOL C 403
18
BC9
SOFTWARE
EDO A:407 , TYR C:97 , HIS C:170 , ARG C:223 , LEU C:226 , ASP C:256 , TRP C:278 , CO C:402 , HOH C:688 , HOH C:707 , HOH C:712
BINDING SITE FOR RESIDUE PG4 C 404
19
CC1
SOFTWARE
HIS C:120 , GLU C:124 , GLY C:128 , THR C:129 , HOH C:540 , HOH C:550
BINDING SITE FOR RESIDUE GOL C 405
20
CC2
SOFTWARE
LEU C:102 , PRO C:103 , PHE C:104 , LEU C:107 , ASP C:148 , HOH C:704 , HOH C:706
BINDING SITE FOR RESIDUE EDO C 406
21
CC3
SOFTWARE
ASN C:160 , LYS C:164 , GLY C:189 , ASP C:191 , HOH C:599
BINDING SITE FOR RESIDUE GOL C 407
22
CC4
SOFTWARE
HIS D:22 , HIS D:24 , KCX D:137 , ASP D:256 , CO D:402 , HOH D:701
BINDING SITE FOR RESIDUE FE2 D 401
23
CC5
SOFTWARE
KCX D:137 , HIS D:170 , HIS D:199 , ARG D:223 , FE2 D:401 , PG4 D:404 , HOH D:701
BINDING SITE FOR RESIDUE CO D 402
24
CC6
SOFTWARE
ILE C:243 , GLY C:295 , VAL C:296 , ASN C:297 , VAL C:300 , GLU D:12 , LYS D:14 , ASP D:15 , HOH D:696 , HOH D:719
BINDING SITE FOR RESIDUE EDO D 403
25
CC7
SOFTWARE
TYR D:97 , ARG D:223 , ASP D:256 , THR D:265 , ALA D:266 , ALA D:275 , CO D:402 , HOH D:701 , HOH D:704
BINDING SITE FOR RESIDUE PG4 D 404
26
CC8
SOFTWARE
ASP D:112 , ASP D:116 , ILE D:119 , HOH D:710 , HOH D:722
BINDING SITE FOR RESIDUE GOL D 405
27
CC9
SOFTWARE
GLN D:58 , PHE D:59 , HOH D:718
BINDING SITE FOR RESIDUE EDO D 406
28
DC1
SOFTWARE
ASN D:160 , LYS D:164 , GLY D:189 , VAL D:190 , ASP D:191 , LYS D:194 , HOH D:589 , HOH D:706
BINDING SITE FOR RESIDUE GOL D 407
29
DC2
SOFTWARE
ASP D:249 , LYS D:250 , LYS D:311 , HOH D:678 , HOH D:702
BINDING SITE FOR RESIDUE EDO D 408
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4keta_ (A:)
1b: SCOP_d4ketb_ (B:)
1c: SCOP_d4ketc_ (C:)
1d: SCOP_d4ketd_ (D:)
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Metallo-dependent hydrolases
(273)
Family
:
automated matches
(44)
Protein domain
:
automated matches
(44)
Sulfolobus solfataricus [TaxId: 2287]
(10)
1a
d4keta_
A:
1b
d4ketb_
B:
1c
d4ketc_
C:
1d
d4ketd_
D:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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]
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Protein & NOT Site
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Chain D
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