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4JFS
Asym. Unit
Info
Asym.Unit (168 KB)
Biol.Unit 1 (84 KB)
Biol.Unit 2 (82 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A BACTERIAL FUCOSIDASE WITH IMINOSUGAR INHIBITOR 4-EPI-(+)-CODONOPSININE
Authors
:
D. W. Wright, G. J. Davies
Date
:
28 Feb 13 (Deposition) - 18 Sep 13 (Release) - 18 Sep 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Alpha-L-Fucosidase, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Hottin, D. W. Wright, A. Steenackers, P. Delannoy, F. Dubar, C. Biot G. J. Davies, J. B. Behr
Alpha-L-Fucosidase Inhibition By Pyrrolidine-Ferrocene Hybrids: Rationalization Of Ligand-Binding Properties By Structural Studies.
Chemistry V. 19 9526 2013
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Hetero Components
(5, 13)
Info
All Hetero Components
1a: (2S,3S,4R,5S)-2-(4-METHOXYPHENYL)-... (16Za)
1b: (2S,3S,4R,5S)-2-(4-METHOXYPHENYL)-... (16Zb)
2a: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEa)
3a: GLYCEROL (GOLa)
4a: IMIDAZOLE (IMDa)
4b: IMIDAZOLE (IMDb)
4c: IMIDAZOLE (IMDc)
4d: IMIDAZOLE (IMDd)
4e: IMIDAZOLE (IMDe)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
View:
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No.
Name
Count
Type
Full Name
1
16Z
2
Ligand/Ion
(2S,3S,4R,5S)-2-(4-METHOXYPHENYL)-1,5-DIMETHYLPYRROLIDINE-3,4-DIOL
2
EPE
1
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3
GOL
1
Ligand/Ion
GLYCEROL
4
IMD
5
Ligand/Ion
IMIDAZOLE
5
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:66 , GLU A:87 , TRP A:88 , HIS A:135 , TYR A:178 , ASP A:229 , TRP A:232 , ARG A:262 , GLU A:288 , TRP A:316 , GOL A:506
BINDING SITE FOR RESIDUE 16Z A 501
02
AC2
SOFTWARE
ILE A:65 , TRP A:117 , MET A:120 , TYR A:168 , PHE A:359
BINDING SITE FOR RESIDUE IMD A 502
03
AC3
SOFTWARE
LYS A:90 , PRO A:96 , ALA A:97 , HOH A:864
BINDING SITE FOR RESIDUE IMD A 503
04
AC4
SOFTWARE
ARG A:399
BINDING SITE FOR RESIDUE IMD A 504
05
AC5
SOFTWARE
ARG A:262 , ARG A:271 , HIS A:272 , HOH A:988
BINDING SITE FOR RESIDUE SO4 A 505
06
AC6
SOFTWARE
ALA A:85 , GLU A:87 , TRP A:88 , TRP A:92 , ASN A:314 , 16Z A:501 , HOH A:713 , HOH A:1076
BINDING SITE FOR RESIDUE GOL A 506
07
AC7
SOFTWARE
HIS B:66 , GLU B:87 , TRP B:88 , HIS B:135 , TYR B:178 , ASP B:229 , TRP B:232 , ARG B:262 , GLU B:288 , TRP B:316
BINDING SITE FOR RESIDUE 16Z B 501
08
AC8
SOFTWARE
ILE B:65 , TRP B:117 , MET B:120 , TYR B:168 , PHE B:359
BINDING SITE FOR RESIDUE IMD B 502
09
AC9
SOFTWARE
TRP B:241
BINDING SITE FOR RESIDUE IMD B 503
10
BC1
SOFTWARE
ARG B:262 , ARG B:271 , HIS B:272 , HOH B:856
BINDING SITE FOR RESIDUE SO4 B 504
11
BC2
SOFTWARE
LYS B:90 , PRO B:96 , ALA B:97 , HOH B:904
BINDING SITE FOR RESIDUE SO4 B 505
12
BC3
SOFTWARE
GLY B:286 , GLU B:288 , ARG B:290 , HOH B:974
BINDING SITE FOR RESIDUE SO4 B 506
13
BC4
SOFTWARE
TYR B:82 , GLY B:83 , GLY B:84 , TRP B:92 , HOH B:972
BINDING SITE FOR RESIDUE EPE B 507
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (168 KB)
Header - Asym.Unit
Biol.Unit 1 (84 KB)
Header - Biol.Unit 1
Biol.Unit 2 (82 KB)
Header - Biol.Unit 2
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