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4IVF
Asym. Unit
Info
Asym.Unit (642 KB)
Biol.Unit 1 (161 KB)
Biol.Unit 2 (161 KB)
Biol.Unit 3 (161 KB)
Biol.Unit 4 (161 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GLUTATHIONE TRANSFERASE HOMOLOG FROM LODDEROMYCES ELONGISPORUS, TARGET EFI-501753, WITH TWO GSH PER SUBUNIT
Authors
:
M. W. Vetting, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wa S. Sojitra, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, R. N. Armstrong, J. A. G S. C. Almo, Enzyme Function Initiative (Efi)
Date
:
22 Jan 13 (Deposition) - 13 Feb 13 (Release) - 13 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,F (1x)
Biol. Unit 2: B,G (1x)
Biol. Unit 3: C,D (1x)
Biol. Unit 4: E,H (1x)
Keywords
:
Gst, Glutathione S-Transferase, Enzyme Function Initiative, Efi, Structural Genomics, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. W. Vetting, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wasserman, S. Sojitra, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. Hammonds, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, R. N. Armstrong, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of Glutathione Transferase Homolog From Lodderomyces Elongisporus, Target Efi-501753, With Two Gsh Per Subunit
To Be Published
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Hetero Components
(2, 17)
Info
All Hetero Components
1a: CITRIC ACID (CITa)
2a: GLUTATHIONE (GSHa)
2b: GLUTATHIONE (GSHb)
2c: GLUTATHIONE (GSHc)
2d: GLUTATHIONE (GSHd)
2e: GLUTATHIONE (GSHe)
2f: GLUTATHIONE (GSHf)
2g: GLUTATHIONE (GSHg)
2h: GLUTATHIONE (GSHh)
2i: GLUTATHIONE (GSHi)
2j: GLUTATHIONE (GSHj)
2k: GLUTATHIONE (GSHk)
2l: GLUTATHIONE (GSHl)
2m: GLUTATHIONE (GSHm)
2n: GLUTATHIONE (GSHn)
2o: GLUTATHIONE (GSHo)
2p: GLUTATHIONE (GSHp)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CIT
1
Ligand/Ion
CITRIC ACID
2
GSH
16
Ligand/Ion
GLUTATHIONE
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:17 , ARG A:57 , GLY A:119 , PRO A:120 , GLY A:123 , TRP A:184 , GSH A:302 , HOH A:412 , HOH A:423 , HOH A:424 , HOH A:449 , HOH A:529 , ARG F:142 , HOH F:478
BINDING SITE FOR RESIDUE GSH A 301
02
AC2
SOFTWARE
THR A:15 , ASN A:17 , THR A:44 , LYS A:45 , ARG A:57 , ILE A:58 , PRO A:59 , GLN A:77 , THR A:78 , GSH A:301 , HOH A:411 , HOH A:412 , HOH A:415 , HOH A:426 , HOH A:549 , GLU F:117
BINDING SITE FOR RESIDUE GSH A 302
03
AC3
SOFTWARE
ASN B:17 , ARG B:57 , GLY B:119 , PRO B:120 , GLY B:123 , TRP B:184 , GSH B:302 , HOH B:406 , HOH B:411 , HOH B:446 , ARG G:142
BINDING SITE FOR RESIDUE GSH B 301
04
AC4
SOFTWARE
THR B:15 , ASN B:17 , LEU B:39 , THR B:44 , ARG B:57 , ILE B:58 , GLN B:77 , THR B:78 , GSH B:301 , HOH B:404 , HOH B:421 , HOH B:480 , GLU G:117
BINDING SITE FOR RESIDUE GSH B 302
05
AC5
SOFTWARE
ASN C:17 , ARG C:57 , GLY C:119 , PRO C:120 , GLY C:123 , TRP C:184 , GSH C:302 , HOH C:411 , HOH C:414 , HOH C:421 , HOH C:422 , HOH C:524 , ARG D:142 , HOH D:437
BINDING SITE FOR RESIDUE GSH C 301
06
AC6
SOFTWARE
THR C:15 , ASN C:17 , THR C:44 , LYS C:45 , ARG C:57 , ILE C:58 , GLN C:77 , THR C:78 , GSH C:301 , HOH C:402 , HOH C:403 , HOH C:408 , HOH C:421 , GLU D:117
BINDING SITE FOR RESIDUE GSH C 302
07
AC7
SOFTWARE
ARG C:142 , ASN D:17 , ARG D:57 , GLY D:119 , PRO D:120 , GLY D:123 , TRP D:184 , GSH D:302 , HOH D:422 , HOH D:426 , HOH D:434 , HOH D:454 , HOH D:488 , HOH D:507 , HOH D:514
BINDING SITE FOR RESIDUE GSH D 301
08
AC8
SOFTWARE
GLU C:117 , THR D:15 , ASN D:17 , LEU D:39 , LYS D:45 , ARG D:57 , ILE D:58 , GLN D:77 , THR D:78 , GSH D:301 , HOH D:401 , HOH D:413 , HOH D:453
BINDING SITE FOR RESIDUE GSH D 302
09
AC9
SOFTWARE
PRO E:14 , THR E:15 , ASN E:126 , PHE E:130 , ARG E:187 , ARG E:190 , LYS E:223 , GSH E:302 , HOH E:422 , HOH E:451 , HOH E:563 , GLU F:192
BINDING SITE FOR RESIDUE CIT E 301
10
BC1
SOFTWARE
ASN E:17 , ARG E:57 , GLY E:119 , PRO E:120 , GLY E:123 , TRP E:184 , CIT E:301 , GSH E:303 , HOH E:409 , HOH E:414 , HOH E:415 , HOH E:426 , ARG H:142 , HOH H:471
BINDING SITE FOR RESIDUE GSH E 302
11
BC2
SOFTWARE
THR E:15 , ASN E:17 , THR E:44 , LYS E:45 , ARG E:57 , ILE E:58 , GLN E:77 , THR E:78 , GSH E:302 , HOH E:403 , HOH E:405 , HOH E:408 , HOH E:409 , GLU H:117
BINDING SITE FOR RESIDUE GSH E 303
12
BC3
SOFTWARE
ARG A:142 , ASN F:17 , ARG F:57 , GLY F:119 , PRO F:120 , GLY F:123 , HIS F:127 , TRP F:184 , GSH F:302 , HOH F:403 , HOH F:404 , HOH F:413 , HOH F:453
BINDING SITE FOR RESIDUE GSH F 301
13
BC4
SOFTWARE
GLU A:117 , THR F:15 , ASN F:17 , THR F:44 , LYS F:45 , ARG F:57 , ILE F:58 , GLN F:77 , THR F:78 , GSH F:301 , HOH F:407 , HOH F:427 , HOH F:486 , HOH F:535
BINDING SITE FOR RESIDUE GSH F 302
14
BC5
SOFTWARE
ARG B:142 , ASN G:17 , ARG G:57 , GLY G:119 , PRO G:120 , GLY G:123 , TRP G:184 , GSH G:302 , HOH G:414 , HOH G:419 , HOH G:445
BINDING SITE FOR RESIDUE GSH G 301
15
BC6
SOFTWARE
GLU B:117 , THR G:15 , ASN G:17 , LEU G:39 , THR G:44 , LYS G:45 , ARG G:57 , ILE G:58 , PRO G:59 , GLN G:77 , THR G:78 , GSH G:301 , HOH G:404 , HOH G:411 , HOH G:414 , HOH G:425
BINDING SITE FOR RESIDUE GSH G 302
16
BC7
SOFTWARE
ARG E:142 , ASN H:17 , ARG H:57 , GLY H:119 , PRO H:120 , GLY H:123 , TRP H:184 , GSH H:302 , HOH H:415 , HOH H:420 , HOH H:423 , HOH H:431 , HOH H:470
BINDING SITE FOR RESIDUE GSH H 301
17
BC8
SOFTWARE
GLU E:117 , THR H:15 , ASN H:17 , LEU H:39 , THR H:44 , LYS H:45 , ARG H:57 , ILE H:58 , GLN H:77 , THR H:78 , GSH H:301 , HOH H:443 , HOH H:452
BINDING SITE FOR RESIDUE GSH H 302
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 15)
Info
All SCOP Domains
1a: SCOP_d4ivfb2 (B:95-222)
1b: SCOP_d4ivfc2 (C:95-230)
1c: SCOP_d4ivfd2 (D:95-223)
1d: SCOP_d4ivfe2 (E:95-230)
1e: SCOP_d4ivff2 (F:95-231)
1f: SCOP_d4ivfg2 (G:95-230)
1g: SCOP_d4ivfh2 (H:95-222)
2a: SCOP_d4ivfa1 (A:5-94)
2b: SCOP_d4ivfb1 (B:5-94)
2c: SCOP_d4ivfc1 (C:5-94)
2d: SCOP_d4ivfd1 (D:5-94)
2e: SCOP_d4ivfe1 (E:5-94)
2f: SCOP_d4ivff1 (F:5-94)
2g: SCOP_d4ivfg1 (G:5-94)
2h: SCOP_d4ivfh1 (H:5-94)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
automated matches
(86)
Protein domain
:
automated matches
(86)
Lodderomyces elongisporus [TaxId: 379508]
(1)
1a
d4ivfb2
B:95-222
1b
d4ivfc2
C:95-230
1c
d4ivfd2
D:95-223
1d
d4ivfe2
E:95-230
1e
d4ivff2
F:95-231
1f
d4ivfg2
G:95-230
1g
d4ivfh2
H:95-222
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
automated matches
(347)
Protein domain
:
automated matches
(347)
Lodderomyces elongisporus [TaxId: 379508]
(1)
2a
d4ivfa1
A:5-94
2b
d4ivfb1
B:5-94
2c
d4ivfc1
C:5-94
2d
d4ivfd1
D:5-94
2e
d4ivfe1
E:5-94
2f
d4ivff1
F:5-94
2g
d4ivfg1
G:5-94
2h
d4ivfh1
H:5-94
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Sorry, no Info available
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