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4HP2
Asym. Unit
Info
Asym.Unit (33 KB)
Biol.Unit 1 (25 KB)
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(1)
Title
:
INVARIOM REFINEMENT OF A NEW DIMERIC MONOCLINIC 2 SOLVATE OF THIOSTREPTON AT 0.64 ANGSTROM RESOLUTION
Authors
:
K. Proepper, J. J. Holstein, C. B. Huebschle, C. S. Bond, B. Dittrich
Date
:
23 Oct 12 (Deposition) - 02 Oct 13 (Release) - 02 Oct 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
0.64
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Antibiotic, Thiopeptide, Antibacterial, Thiazole, Thiazoline, Oxazole, Ribosome, Translation Inhibition
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Propper, J. J. Holstein, C. B. Hubschle, C. S. Bond, B. Dittrich
Invariom Refinement Of A New Monoclinic Solvate Of Thiostrepton At 0. 64 Angstrom Resolution.
Acta Crystallogr. , Sect. D V. 69 1530 2013
[
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Hetero Components
(10, 40)
Info
All Hetero Components
01a: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9a)
01b: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9b)
01c: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9c)
01d: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9d)
01e: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9e)
01f: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9f)
01g: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9g)
01h: (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOI... (BB9h)
02a: (2Z)-2-AMINOBUT-2-ENOIC ACID (DBUa)
02b: (2Z)-2-AMINOBUT-2-ENOIC ACID (DBUb)
03a: D-CYSTEINE (DCYa)
03b: D-CYSTEINE (DCYb)
04a: 2-AMINO-ACRYLIC ACID (DHAa)
04b: 2-AMINO-ACRYLIC ACID (DHAb)
04c: 2-AMINO-ACRYLIC ACID (DHAc)
04d: 2-AMINO-ACRYLIC ACID (DHAd)
04e: 2-AMINO-ACRYLIC ACID (DHAe)
04f: 2-AMINO-ACRYLIC ACID (DHAf)
05a: DIMETHYLFORMAMIDE (DMFa)
05b: DIMETHYLFORMAMIDE (DMFb)
05c: DIMETHYLFORMAMIDE (DMFc)
05d: DIMETHYLFORMAMIDE (DMFd)
05e: DIMETHYLFORMAMIDE (DMFe)
05f: DIMETHYLFORMAMIDE (DMFf)
05g: DIMETHYLFORMAMIDE (DMFg)
05h: DIMETHYLFORMAMIDE (DMFh)
06a: DIETHYL ETHER (ETZa)
06b: DIETHYL ETHER (ETZb)
06c: DIETHYL ETHER (ETZc)
06d: DIETHYL ETHER (ETZd)
06e: DIETHYL ETHER (ETZe)
06f: DIETHYL ETHER (ETZf)
07a: 3-HYDROXY-2-IMINOPROPANOIC ACID (MH6a)
07b: 3-HYDROXY-2-IMINOPROPANOIC ACID (MH6b)
08a: AMINO GROUP (NH2a)
08b: AMINO GROUP (NH2b)
09a: 8-HYDROXY-4-(1-HYDROXYETHYL)QUINOL... (QUAa)
09b: 8-HYDROXY-4-(1-HYDROXYETHYL)QUINOL... (QUAb)
10a: (2S,3S,4R)-2-AMINO-3,4-DIHYDROXY-3... (TS9a)
10b: (2S,3S,4R)-2-AMINO-3,4-DIHYDROXY-3... (TS9b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BB9
8
Mod. Amino Acid
(2Z)-2-AMINO-3-SULFANYLPROP-2-ENOIC ACID
2
DBU
2
Mod. Amino Acid
(2Z)-2-AMINOBUT-2-ENOIC ACID
3
DCY
2
Mod. Amino Acid
D-CYSTEINE
4
DHA
6
Mod. Amino Acid
2-AMINO-ACRYLIC ACID
5
DMF
8
Ligand/Ion
DIMETHYLFORMAMIDE
6
ETZ
6
Ligand/Ion
DIETHYL ETHER
7
MH6
2
Mod. Amino Acid
3-HYDROXY-2-IMINOPROPANOIC ACID
8
NH2
2
Mod. Amino Acid
AMINO GROUP
9
QUA
2
Mod. Amino Acid
8-HYDROXY-4-(1-HYDROXYETHYL)QUINOLINE-2-CARBOXYLIC ACID
10
TS9
2
Mod. Amino Acid
(2S,3S,4R)-2-AMINO-3,4-DIHYDROXY-3-METHYLPENTANOIC ACID
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:2 , ALA A:3 , DHA A:4 , ALA A:5 , SER A:6 , BB9 A:7 , THR A:8 , TS9 A:11 , THR A:13 , BB9 A:14 , HOH A:201 , QUA B:1 , BB9 B:7
BINDING SITE FOR RESIDUE QUA A 1
02
AC2
SOFTWARE
DHA A:18 , ETZ A:103 , ETZ A:104 , ETZ A:107 , ETZ B:106
BINDING SITE FOR RESIDUE NH2 A 19
03
AC3
SOFTWARE
QUA A:1 , BB9 A:7 , HOH A:202 , ILE B:2 , ALA B:3 , DHA B:4 , ALA B:5 , SER B:6 , BB9 B:7 , THR B:8 , TS9 B:11 , THR B:13 , BB9 B:14
BINDING SITE FOR RESIDUE QUA B 1
04
AC4
SOFTWARE
DMF A:102 , ETZ A:103 , DCY B:10 , BB9 B:12 , DHA B:18 , DMF B:104 , ETZ B:106
BINDING SITE FOR RESIDUE NH2 B 19
05
AC5
SOFTWARE
ALA A:3 , DHA A:4 , ALA B:3 , DHA B:4
BINDING SITE FOR RESIDUE DMF A 101
06
AC6
SOFTWARE
ALA A:5 , SER A:6 , BB9 A:12 , THR A:13 , BB9 A:14 , BB9 A:16 , DHA A:18 , ETZ A:106 , DCY B:10 , DHA B:18 , NH2 B:19 , DMF B:105 , ETZ B:106
BINDING SITE FOR RESIDUE DMF A 102
07
AC7
SOFTWARE
NH2 A:19 , ETZ A:107 , DCY B:10 , BB9 B:12 , BB9 B:14 , DHA B:18 , NH2 B:19 , ETZ B:106
BINDING SITE FOR RESIDUE ETZ A 103
08
AC8
SOFTWARE
THR A:8 , BB9 A:12 , BB9 A:14 , DHA A:18 , NH2 A:19 , ETZ A:107 , ETZ B:106
BINDING SITE FOR RESIDUE ETZ A 104
09
AC9
SOFTWARE
ALA A:5 , BB9 A:16
BINDING SITE FOR RESIDUE ETZ A 105
10
BC1
SOFTWARE
BB9 A:12 , DMF A:102 , DMF B:103 , DMF B:105
BINDING SITE FOR RESIDUE ETZ A 106
11
BC2
SOFTWARE
DBU A:9 , DCY A:10 , DHA A:18 , NH2 A:19 , ETZ A:103 , ETZ A:104 , DMF A:108 , DHA B:18
BINDING SITE FOR RESIDUE ETZ A 107
12
BC3
SOFTWARE
DHA A:18 , ETZ A:107 , DHA B:18 , DMF B:101
BINDING SITE FOR RESIDUE DMF A 108
13
BC4
SOFTWARE
DMF A:108 , DHA B:17 , DHA B:18 , DMF B:102 , DMF B:104
BINDING SITE FOR RESIDUE DMF B 101
14
BC5
SOFTWARE
DHA A:17 , ALA B:5 , DHA B:17 , DHA B:18 , DMF B:101 , DMF B:104
BINDING SITE FOR RESIDUE DMF B 102
15
BC6
SOFTWARE
BB9 A:16 , ETZ A:106 , SER B:6 , BB9 B:14 , DMF B:105
BINDING SITE FOR RESIDUE DMF B 103
16
BC7
SOFTWARE
DCY B:10 , DHA B:17 , DHA B:18 , NH2 B:19 , DMF B:101 , DMF B:102
BINDING SITE FOR RESIDUE DMF B 104
17
BC8
SOFTWARE
BB9 A:12 , BB9 A:16 , DMF A:102 , ETZ A:106 , BB9 B:14 , MH6 B:15 , DMF B:103
BINDING SITE FOR RESIDUE DMF B 105
18
BC9
SOFTWARE
NH2 A:19 , DMF A:102 , ETZ A:103 , ETZ A:104 , THR B:8 , DBU B:9 , DCY B:10 , BB9 B:12 , NH2 B:19
BINDING SITE FOR RESIDUE ETZ B 106
19
CC1
SOFTWARE
QUA A:1 , NH2 A:19 , DMF A:101 , DMF A:102 , ETZ A:104 , ETZ A:105 , ETZ A:106 , ETZ A:107 , DMF A:108 , HOH A:201 , HOH A:202 , QUA B:1 , ILE B:2 , ALA B:3 , TS9 B:11 , BB9 B:12 , THR B:13 , MH6 B:15 , BB9 B:16 , DHA B:17 , DHA B:18 , NH2 B:19 , DMF B:102 , DMF B:103 , DMF B:105
BINDING SITE FOR CHAIN A OF THIOSTREPTON
20
CC2
SOFTWARE
QUA A:1 , ILE A:2 , TS9 A:11 , BB9 A:12 , THR A:13 , MH6 A:15 , BB9 A:16 , DHA A:17 , DHA A:18 , NH2 A:19 , DMF A:101 , DMF A:102 , ETZ A:103 , ETZ A:107 , DMF A:108 , HOH A:201 , HOH A:202 , QUA B:1 , NH2 B:19 , DMF B:101 , DMF B:102 , DMF B:103 , DMF B:104 , DMF B:105 , ETZ B:106
BINDING SITE FOR CHAIN B OF THIOSTREPTON
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SAPs(SNPs)/Variants
(0, 0)
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