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4HO9
Biol. Unit 3
Info
Asym.Unit (113 KB)
Biol.Unit 1 (56 KB)
Biol.Unit 2 (55 KB)
Biol.Unit 3 (212 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GLUCOSE 1-PHOSPHATE THYMIDYLYLTRANSFERASE FROM ANEURINIBACILLUS THERMOAEROPHILUS COMPLEXED WITH UDP-GALACTOSE AND UTP
Authors
:
T. J. Chen, W. T. Chien, C. C. Lin, W. C. Wang
Date
:
22 Oct 12 (Deposition) - 23 Oct 13 (Release) - 23 Oct 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Keywords
:
Thymidylyltransferase, Nucleotide Binding, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
T. J. Chen, W. T. Chien, C. C. Lin, W. C. Wang
Crystal Structure Of Glucose 1-Phosphate Thymidylyltransferase From Aneurinibacillus Thermoaerophilu Complexed With Udp-Galactose And Utp
To Be Published
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Hetero Components
(3, 26)
Info
All Hetero Components
1a: GALACTOSE-URIDINE-5'-DIPHOSPHATE (GDUa)
1b: GALACTOSE-URIDINE-5'-DIPHOSPHATE (GDUb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
3a: URIDINE 5'-TRIPHOSPHATE (UTPa)
3b: URIDINE 5'-TRIPHOSPHATE (UTPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GDU
4
Ligand/Ion
GALACTOSE-URIDINE-5'-DIPHOSPHATE
2
SO4
18
Ligand/Ion
SULFATE ION
3
UTP
4
Ligand/Ion
URIDINE 5'-TRIPHOSPHATE
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LEU A:6 , GLY A:8 , GLY A:9 , GLN A:80 , PRO A:83 , ASP A:84 , GLY A:85 , LEU A:106 , ASP A:108 , ASN A:109 , GLY A:144 , GLU A:159 , LYS A:160 , VAL A:170 , THR A:171 , TYR A:174 , ARG A:192 , TRP A:221 , HOH A:405 , HOH A:412 , HOH A:445 , HOH A:446 , HOH A:500 , HOH A:578 , HOH A:607 , HOH A:611 , HOH A:644
BINDING SITE FOR RESIDUE GDU A 300
02
AC2
SOFTWARE
LEU A:43 , TYR A:112 , GLY A:113 , HIS A:114 , GLY A:115 , PHE A:116 , THR A:117 , GLU A:118 , VAL A:248 , ALA A:249 , ILE A:254 , ARG A:257 , HOH A:402 , HOH A:424 , HOH A:586 , GLY B:216 , ARG B:217 , GLY B:218 , HOH B:529
BINDING SITE FOR RESIDUE UTP A 301
03
AC3
SOFTWARE
GLY A:11 , THR A:12 , ARG A:13 , HOH A:500 , HOH A:508 , HOH A:607 , HOH A:647
BINDING SITE FOR RESIDUE SO4 A 302
04
AC4
SOFTWARE
GLY A:66 , GLY A:67 , GLY A:68 , SER A:69 , GLU A:70 , HOH A:619
BINDING SITE FOR RESIDUE SO4 A 303
05
AC5
SOFTWARE
ASN A:125 , ARG A:126 , LYS A:127 , SER A:128 , HOH A:510 , LYS B:268 , HOH B:586
BINDING SITE FOR RESIDUE SO4 A 304
06
AC6
SOFTWARE
LYS A:153 , HIS A:211 , HOH A:414
BINDING SITE FOR RESIDUE SO4 A 305
07
AC7
SOFTWARE
SER A:190 , ALA A:191 , HOH A:474 , HOH A:549
BINDING SITE FOR RESIDUE SO4 A 306
08
AC8
SOFTWARE
LEU B:6 , GLY B:8 , GLY B:9 , GLN B:80 , PRO B:83 , ASP B:84 , GLY B:85 , LEU B:86 , LEU B:106 , ASP B:108 , GLY B:144 , GLU B:159 , LYS B:160 , VAL B:170 , THR B:171 , TYR B:174 , ARG B:192 , ILE B:197 , THR B:198 , SO4 B:302 , HOH B:401 , HOH B:406 , HOH B:424 , HOH B:441 , HOH B:460 , HOH B:579 , HOH B:602 , HOH B:614 , HOH B:639
BINDING SITE FOR RESIDUE GDU B 300
09
AC9
SOFTWARE
GLY A:216 , ARG A:217 , GLY A:218 , LEU B:43 , TYR B:112 , GLY B:113 , HIS B:114 , GLY B:115 , PHE B:116 , THR B:117 , VAL B:248 , ALA B:249 , GLU B:253 , ILE B:254 , HOH B:408 , HOH B:416 , HOH B:445 , HOH B:511 , HOH B:555
BINDING SITE FOR RESIDUE UTP B 301
10
BC1
SOFTWARE
GLY B:9 , SER B:10 , GDU B:300 , HOH B:455 , HOH B:502
BINDING SITE FOR RESIDUE SO4 B 302
11
BC2
SOFTWARE
GLY B:66 , GLY B:67 , GLY B:68 , SER B:69 , HOH B:580 , HOH B:657
BINDING SITE FOR RESIDUE SO4 B 303
12
BC3
SOFTWARE
ARG B:126 , LYS B:127 , SER B:128
BINDING SITE FOR RESIDUE SO4 B 304
13
BC4
SOFTWARE
HOH A:411 , GLN B:265 , HOH B:514 , HOH B:586 , HOH B:647
BINDING SITE FOR RESIDUE SO4 B 305
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4ho9a_ (A:)
1b: SCOP_d4ho9b_ (B:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Nucleotide-diphospho-sugar transferases
(408)
Superfamily
:
Nucleotide-diphospho-sugar transferases
(408)
Family
:
glucose-1-phosphate thymidylyltransferase
(43)
Protein domain
:
RmlA (RfbA)
(27)
Aneurinibacillus thermoaerophilus [TaxId: 143495]
(9)
1a
d4ho9a_
A:
1b
d4ho9b_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (113 KB)
Header - Asym.Unit
Biol.Unit 1 (56 KB)
Header - Biol.Unit 1
Biol.Unit 2 (55 KB)
Header - Biol.Unit 2
Biol.Unit 3 (212 KB)
Header - Biol.Unit 3
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