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4HFE
Asym. Unit
Info
Asym.Unit (564 KB)
Biol.Unit 1 (555 KB)
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(1)
Title
:
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL F14'A ETHANOL-SENSITIVE MUTANT COMPLEXED TO ETHANOL
Authors
:
L. Sauguet, R. J. Howard, L. Malherbe, U. S. Lee, P. J. Corringer, R. A. Ha M. Delarue
Date
:
05 Oct 12 (Deposition) - 17 Apr 13 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E (1x)
Keywords
:
Pentameric Transmembrane Channel, Ion-Channel, Membrane Protein, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Sauguet, R. J. Howard, L. Malherbe, U. S. Lee, P. J. Corringer, R. A. Harris, M. Delarue
Structural Basis For Potentiation By Alcohols And Anaesthetics In A Ligand-Gated Ion Channel.
Nat Commun V. 4 1697 2013
[
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Hetero Components
(7, 49)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
1j: ACETATE ION (ACTj)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
3a: ETHANOL (EOHa)
3b: ETHANOL (EOHb)
3c: ETHANOL (EOHc)
3d: ETHANOL (EOHd)
3e: ETHANOL (EOHe)
4a: DODECYL-BETA-D-MALTOSIDE (LMTa)
4b: DODECYL-BETA-D-MALTOSIDE (LMTb)
4c: DODECYL-BETA-D-MALTOSIDE (LMTc)
4d: DODECYL-BETA-D-MALTOSIDE (LMTd)
4e: DODECYL-BETA-D-MALTOSIDE (LMTe)
4f: DODECYL-BETA-D-MALTOSIDE (LMTf)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
5d: SODIUM ION (NAd)
5e: SODIUM ION (NAe)
5f: SODIUM ION (NAf)
6a: DIUNDECYL PHOSPHATIDYL CHOLINE (PLCa)
6b: DIUNDECYL PHOSPHATIDYL CHOLINE (PLCb)
6c: DIUNDECYL PHOSPHATIDYL CHOLINE (PLCc)
6d: DIUNDECYL PHOSPHATIDYL CHOLINE (PLCd)
6e: DIUNDECYL PHOSPHATIDYL CHOLINE (PLCe)
7a: UNKNOWN LIGAND (UNLa)
7b: UNKNOWN LIGAND (UNLb)
7c: UNKNOWN LIGAND (UNLc)
7d: UNKNOWN LIGAND (UNLd)
7e: UNKNOWN LIGAND (UNLe)
7f: UNKNOWN LIGAND (UNLf)
7g: UNKNOWN LIGAND (UNLg)
7h: UNKNOWN LIGAND (UNLh)
7i: UNKNOWN LIGAND (UNLi)
7j: UNKNOWN LIGAND (UNLj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
10
Ligand/Ion
ACETATE ION
2
CL
7
Ligand/Ion
CHLORIDE ION
3
EOH
5
Ligand/Ion
ETHANOL
4
LMT
6
Ligand/Ion
DODECYL-BETA-D-MALTOSIDE
5
NA
6
Ligand/Ion
SODIUM ION
6
PLC
5
Ligand/Ion
DIUNDECYL PHOSPHATIDYL CHOLINE
7
UNL
10
Ligand/Ion
UNKNOWN LIGAND
[
close Hetero Component info
]
Sites
(38, 38)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:77 , ILE A:131 , GLU A:181 , PHE E:42 , ARG E:105
BINDING SITE FOR RESIDUE ACT A 401
02
AC2
SOFTWARE
PHE A:78 , ARG A:85
BINDING SITE FOR RESIDUE CL A 402
03
AC3
SOFTWARE
ASN A:139 , LEU A:180 , ALA D:175
BINDING SITE FOR RESIDUE CL A 403
04
AC4
SOFTWARE
ALA A:175
BINDING SITE FOR RESIDUE CL A 404
05
AC5
SOFTWARE
PRO A:68 , ILE A:71 , ILE A:73
BINDING SITE FOR RESIDUE NA A 405
06
AC6
SOFTWARE
ILE A:236 , ASN A:239 , ILE A:240 , GLU A:243 , TYR A:263 , ASN E:200
BINDING SITE FOR RESIDUE EOH A 407
07
AC7
SOFTWARE
ILE A:73 , PRO A:74 , ILE A:76 , ARG A:85 , TYR A:102
BINDING SITE FOR RESIDUE ACT A 408
08
AC8
SOFTWARE
LMT C:405 , LMT E:405
BINDING SITE FOR RESIDUE LMT A 409
09
AC9
SOFTWARE
ALA A:237 , ILE A:240 , THR B:244
BINDING SITE FOR RESIDUE LMT A 410
10
BC1
SOFTWARE
ARG A:118 , PHE A:121 , TYR A:194 , TYR A:254 , ASN A:307
BINDING SITE FOR RESIDUE PLC A 411
11
BC2
SOFTWARE
PHE A:42 , ARG A:105 , ARG B:77 , ILE B:131 , GLU B:181
BINDING SITE FOR RESIDUE ACT B 401
12
BC3
SOFTWARE
PHE B:78 , ARG B:85
BINDING SITE FOR RESIDUE CL B 402
13
BC4
SOFTWARE
PRO B:68 , ILE B:71 , ILE B:73
BINDING SITE FOR RESIDUE NA B 403
14
BC5
SOFTWARE
ILE B:73 , PRO B:74 , ILE B:76 , ARG B:85 , TYR B:102
BINDING SITE FOR RESIDUE ACT B 404
15
BC6
SOFTWARE
ALA A:237 , ALA B:237
BINDING SITE FOR RESIDUE LMT B 405
16
BC7
SOFTWARE
ASN A:200 , PRO A:204 , ASN B:239 , ILE B:240 , GLU B:243 , TYR B:263
BINDING SITE FOR RESIDUE EOH B 406
17
BC8
SOFTWARE
ARG B:118 , PHE B:121 , TYR B:194 , TYR B:254 , ASN B:307
BINDING SITE FOR RESIDUE PLC B 407
18
BC9
SOFTWARE
PHE B:42 , ARG B:105 , ARG C:77 , ILE C:131 , GLU C:181
BINDING SITE FOR RESIDUE ACT C 401
19
CC1
SOFTWARE
PHE C:78 , ARG C:85
BINDING SITE FOR RESIDUE CL C 402
20
CC2
SOFTWARE
PRO C:68 , ILE C:71
BINDING SITE FOR RESIDUE NA C 403
21
CC3
SOFTWARE
ILE C:73 , PRO C:74 , ILE C:76 , ARG C:85 , TYR C:102
BINDING SITE FOR RESIDUE ACT C 404
22
CC4
SOFTWARE
LMT A:409
BINDING SITE FOR RESIDUE LMT C 405
23
CC5
SOFTWARE
ASN B:200 , ASN C:239 , ILE C:240 , GLU C:243 , TYR C:263
BINDING SITE FOR RESIDUE EOH C 406
24
CC6
SOFTWARE
ARG C:118 , PHE C:121 , TYR C:194 , TYR C:254 , ASN C:307
BINDING SITE FOR RESIDUE PLC C 407
25
CC7
SOFTWARE
PHE C:42 , ARG C:105 , ARG D:77 , ILE D:131 , GLU D:181
BINDING SITE FOR RESIDUE ACT D 401
26
CC8
SOFTWARE
ASN C:200 , ASN D:239 , GLU D:243
BINDING SITE FOR RESIDUE EOH D 402
27
CC9
SOFTWARE
ASN D:200 , LEU D:241 , ASN E:239 , ILE E:240 , GLU E:243 , TYR E:263
BINDING SITE FOR RESIDUE EOH D 403
28
DC1
SOFTWARE
PHE D:78 , ARG D:85
BINDING SITE FOR RESIDUE CL D 404
29
DC2
SOFTWARE
VAL D:5 , ILE D:71 , ILE D:73
BINDING SITE FOR RESIDUE NA D 405
30
DC3
SOFTWARE
ILE D:73 , PRO D:74 , ILE D:76 , ARG D:85 , TYR D:102
BINDING SITE FOR RESIDUE ACT D 406
31
DC4
SOFTWARE
ILE D:233 , ALA D:237
BINDING SITE FOR RESIDUE LMT D 407
32
DC5
SOFTWARE
ARG D:118 , PHE D:121 , TYR D:194 , TYR D:254
BINDING SITE FOR RESIDUE PLC D 408
33
DC6
SOFTWARE
PHE D:42 , ARG D:105 , ARG E:77 , ILE E:131 , GLU E:181
BINDING SITE FOR RESIDUE ACT E 401
34
DC7
SOFTWARE
PHE E:78 , ARG E:85
BINDING SITE FOR RESIDUE CL E 402
35
DC8
SOFTWARE
PRO E:68 , ILE E:71
BINDING SITE FOR RESIDUE NA E 403
36
DC9
SOFTWARE
PRO E:74 , ILE E:76 , ARG E:85 , TYR E:102
BINDING SITE FOR RESIDUE ACT E 404
37
EC1
SOFTWARE
LMT A:409 , ALA D:237 , ILE E:240
BINDING SITE FOR RESIDUE LMT E 405
38
EC2
SOFTWARE
ARG E:118 , PHE E:121 , TYR E:194 , TYR E:254 , ASN E:307
BINDING SITE FOR RESIDUE PLC E 406
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
close PROSITE info
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Atom Selection
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Hetero
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
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Chain C
Chain D
Chain E
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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